- Transcript 'KH2012:KH.C12.417.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.417.v1.A.ND2-1
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
KhC12 [13,527 / 14,892]
Amino acid sequence
Length: 102
>KH.C12.417.v1.A.ND2-1
YDVTGSGTIDFDEFLIMMVMQISEEGKTASEEELKDIFLLFDKNGDSYIDWDELKEALSN
TSAKPAVETWEVDELFKEADKNGDGVIDIEEWTLWMDGVQGH
Nucleotide sequence
Length: 629
>KH2012:KH.C12.417.v1.A.ND2-1
CTTGCTAAGATTGTAGAGGAAGTTGACGTTGATGGTATGTGACGTCATGATGACGATGAT
GTATGTGACGTCATGGTGACGTAAATGATATGCGACGATGGTTAGGTGCATAAAATCCGG
GTTTTCATACCCGTTTAATTGAAGCATGACAGTCCACACGTATGTACGATTATGACGTTG
TATAACATAGTTGAATGCTGTGACGTAATATTAATTTGAAGACGTAATATTTGCTATTAT
CACGTAATGCCGAGTAATATGACGTCACAGGCAGCGGTACAATCGACTTCGATGAGTTCT
TGATAATGATGGTTATGCAGATTAGTGAGGAAGGGAAGACGGCGAGCGAGGAAGAATTGA
AAGATATTTTCCTGCTGTTTGATAAGAACGGCGACAGTTACATTGATTGGGACGAATTAA
AGGAAGCGTTGAGCAACACATCGGCCAAACCAGCTGTGGAAACATGGGAGGTAGACGAGT
TGTTTAAGGAAGCGGACAAGAACGGAGATGGTGTCATTGATATTGAAGAATGGACTTTAT
GGATGGACGGCGTTCAAGGTCACTAACCACGTGACGTGATAAATATTTTCGTGAATCGTA
AATTTTAAATAAATTTTGCAAATTTTAAA
| SMART |
EF_hand_dom (IPR002048) - T[1-21] 20.0 - T[33-61] 5.9E-4 - T[71-99] 2.1E-4 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[1-24] 10.385 - T[29-64] 15.35 - T[71-102] 12.979 |
| CDD |
EF_hand_dom (IPR002048) - T[1-59] 1.56184E-7 - T[33-96] 2.43983E-14 |
| Pfam |
EF_hand_dom (IPR002048) - T[2-15] 0.063 - T[31-91] 4.3E-12 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[2-98] 1.22E-25 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[80-92] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 44.211 % | 76.3 | 4.79E-19 |
| TNNC1_HUMAN | 50.505 % | 92.8 | 1.72E-25 |
| TNNC2_HUMAN | 49.495 % | 92 | 3.51E-25 |