- Transcript 'KH2012:KH.L8.11.v1.A...' >
- Transcript 'KH2012:KH.L8.11.v1.A...' >
- Transcript 'KH2012:KH.C8.649.v1....' >
- Transcript 'KH2012:KH.C12.417.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.417.v2.A.ND1-1
Possible name(s)
CALM1; TNNC1; TNNC2
Gene model
Location
KhC12 [13,527 / 15,968]
Amino acid sequence
Length: 166
>KH.C12.417.v2.A.ND1-1
NTMSMTVEDARAKLDKEQISEFKQAFDIFDQDGGGDISTRELGRVMKMLGQTPSPEELAK
IVEEVDVDGSGTIDFDEFLIMMVMQISEEGKTASEEELKDIFLLFDKNGDSYIDWDELKE
ALSNTSAKPAVETWEVDELFKEADKNGDGVIDIEEWTLWMDGVQGH
Nucleotide sequence
Length: 820
>KH2012:KH.C12.417.v2.A.ND1-1
TTGGGAATTCTCAATGTAGCGTGATCACGTGGTGGCTACGTCATATACCTCTAATATCGA
AGATTGAAATATTAAGCTCGTTTAATTAAGACCCGGGCAAGCTCCAGCAGTGATTTACAC
GCCCGAGTTAACCAGTTGCCGCGTAAGTGAGGACAACTGTTGTGTCCTAAAACAAGACAA
CCACAACCCAGTGTTCGATTATTTTTCAGTTAAGACTTGAAGTGGTTGGTTTGTACACGA
AAGTAAAACAAGATAAAATACAATGTCGATGACAGTTGAAGACGCGAGAGCAAAATTGGA
CAAAGAGCAAATATCTGAATTCAAGCAAGCGTTCGACATCTTCGATCAAGATGGCGGCGG
TGACATCAGCACGCGGGAGTTGGGGAGGGTGATGAAAATGTTGGGACAAACACCAAGTCC
GGAGGAACTTGCTAAGATTGTAGAGGAAGTTGACGTTGATGGCAGCGGTACAATCGACTT
CGATGAGTTCTTGATAATGATGGTTATGCAGATTAGTGAGGAAGGGAAGACGGCGAGCGA
GGAAGAATTGAAAGATATTTTCCTGCTGTTTGATAAGAACGGCGACAGTTACATTGATTG
GGACGAATTAAAGGAAGCGTTGAGCAACACATCGGCCAAACCAGCTGTGGAAACATGGGA
GGTAGACGAGTTGTTTAAGGAAGCGGACAAGAACGGAGATGGTGTCATTGATATTGAAGA
ATGGACTTTATGGATGGACGGCGTTCAAGGTCACTAACCACGTGACGTGATAAATATTTT
CGTGAATCGTAAATTTTAAATAAATTTTGCAAATTTTAAA
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[13-163] 3.37E-42 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[17-52] 13.398 - T[53-88] 13.481 - T[93-128] 15.35 - T[135-166] 12.979 |
| CDD |
EF_hand_dom (IPR002048) - T[21-82] 2.94919E-17 - T[97-160] 1.64699E-13 |
| Pfam |
EF_hand_dom (IPR002048) - T[21-82] 5.8E-12 - T[95-155] 5.3E-12 |
| SMART |
EF_hand_dom (IPR002048) - T[21-49] 2.2E-4 - T[57-85] 9.9E-5 - T[97-125] 5.9E-4 - T[135-163] 2.1E-4 |
| ProSitePatterns |
EF_Hand_1_Ca_BS (IPR018247) - T[30-42] . - T[66-78] . - T[144-156] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CALM1_HUMAN | 48.649 % | 138 | 2.34E-42 |
| TNNC1_HUMAN | 53.165 % | 152 | 6.78E-48 |
| TNNC2_HUMAN | 56.41 % | 170 | 8.39E-55 |