- Transcript 'KH2012:KH.C12.468.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.468.v1.B.ND1-1
Possible name(s)
BTAF1; ERCC6; SMARCA2
Gene model
Location
KhC12 [4,296,011 / 4,318,087]
Amino acid sequence
Length: 1,739
>KH.C12.468.v1.B.ND1-1
PTEMSTKPSSLSRLDRVFTLLESGSSSVARKAAAKQLGDVQKKHPQELNHLLAKLLVYIQ
HTEWDTRIAASESIAAVVGEVPKWEPKPCQKNSQEPDFPIDESKLTFAKFDVDRVLTGSH
LLLGSTGDEYMMPTTEGMTGEDIVTKQRKMLEKRLGLSLPGNASMGVTSKELFNDDDLLI
NESVIKIKEEAPSVKQTCKTMMSQLTTEGMSSRERNRAKRKAKLFMKQKSRDNSKPDPDQ
PSRKKIKEEENLGIPPDQIPEHNSSSDEWTEWPMEWISSNLMNLLLSSLWESRHGACIAL
RQIIIKHGGGCGKIRGMNYDELTDHHQSWLTDLAIRLLCVITLDRFADYISDQVVAPVRE
SYCESSLTFAHQATMGVATRGNAVCAIYYCCQTAKCLLPITDHLMTEEPALNKLLSVLWN
SLSEYDELTASTQSVLLLLSKLIKSLPLNIICQGFEPRVLVLRLLPFFHHVLTCVKEAAL
STMLVVIEASENARDWMTSVSSDATWNLLQCCLLETKSNTRDLSSKVFISFVRSCPTEAI
SSCFPYIPMWLNLAYYPESVPIPPTMLVQHTGMKNSDNLTEGHKKHIGGLASSSPSSDEH
IMATRQCIACLIGAVCCHGNNNIEQPTQTTTNVENHLLLLMTSQSAFQRMVACIVVSQWW
MESHLTGVATLFSAIFKILEETFYFSEISVQFIHVQTDMKAFLATLLNKKVDIENFPSKS
SYSFHEVLDFCTTQVPSTLLNRDKDLREQRNLLMKLTDQALKVQFTLDSRVKAFAANAIV
SAVHSSGQKDDNWKLPTKLNPIIRPLMESLKYEENVTVRNAVSSSVARLICLCRSRQPCP
NPKLVKNLCVGMISFTARCPTDESVQKEFSDAILSKCYITQASVSRDGILTILRRISDLQ
TEINNRKRKRNIAEDETANYIPESDQVNPATSSAGAVTCIQTIIKMHEDNLLEVVPTVWE
ILSTLQDDISLLSQSLLLLETVVPVIKGKKLKEKIFGLVPGVLRNLWHEHTSIRYLCSRC
VAVLTNHMPNTIMPVVVDKILPQLDNNQNITQHRGSIEALANIIEVMGTSVVPYAVLMVV
PLLGCISDQDTQTRLLATQCFGQLVQYMPVESGIPDPPDLPEELIRQKQEDRRFLEQLFD
NSSLDEYKIPVKINAKLRPYQEDGVKWLAFLNRYKLHGVLCDDMGLGKTLQTICILASDH
FYQANKKQENEKFHSGKLISLVVCPPTLTGHWVAEVRQFCELLTPQHYAGNPTERLRLQG
EVKKHNLVIASYEVIRNDIEFFSQIKWNYCVLDEGHAIKNGKSKLSQCIKSLYAKHRLIL
TGTPIQNSVLELWSLFDFLIPGLLGSESEFNARYSKPIIASRDAKSSSVEQEEGLIAMES
LHRQVLPFMLRRMKEDVLKDLPPKIIQDYYCELSPLQFQLYEDFAKSRAKKDAESSIKII
DEEKDQTNLMKGTSHVFQALQYLQKVCNHPLFVLTPSHPQYNAIMTQLKKSKTSLHDVKH
ASKLTALQQLLLDCGIGKTGDSLSEESVANQHRALVFCQHRNLLNIIENDLLRQLMPGVT
YLRLDGGVPSNQRYSIVSKFNNDPSIDLLLLTTKVGGLGLNLTGADTVIFVEHDWNPMVD
LQAMDRAHRIGQKKVVNVYRIITRGTMEEKILGLQEFKLNVANTIVGDDNRGIQSMGTNQ
VLDLFNVDQSTPKSHPHSNDATNPSKGLRAMMEGLGELWDQNQYDEEYNLDNFLHSLTK
Nucleotide sequence
Length: 5,739
>KH2012:KH.C12.468.v1.B.ND1-1
CGACACCGAGGCGGAAGGTCGTGTTTATGGCCGAATTTTTTGGTAACTTTGAATGCGAAA
GAAACGGATTCTCTTAACCAGATATACATTGGTTTATCTTAAAAACTTAAAATGGAATCG
CAATCGGATAACGTAACCAACTGAAATGTCAACTAAGCCTTCATCTCTTAGTCGTTTAGA
TCGTGTCTTTACATTACTTGAAAGTGGGTCCAGTTCTGTGGCACGCAAAGCAGCTGCTAA
ACAACTTGGAGACGTACAGAAGAAACATCCACAAGAACTCAACCATTTACTAGCAAAGCT
TTTAGTTTACATTCAACACACTGAATGGGACACCAGGATTGCGGCTTCTGAATCCATAGC
TGCCGTGGTGGGGGAAGTCCCTAAATGGGAACCAAAGCCATGTCAGAAGAATTCCCAAGA
GCCAGATTTCCCAATTGATGAGTCAAAGTTAACGTTTGCAAAGTTTGACGTTGACCGTGT
GTTAACGGGTTCCCACCTCTTGCTTGGATCAACAGGAGATGAATATATGATGCCTACCAC
TGAGGGAATGACAGGTGAAGATATTGTGACAAAACAACGTAAAATGTTGGAAAAACGACT
TGGTCTCTCATTGCCCGGCAACGCAAGCATGGGAGTTACTTCTAAAGAACTTTTCAATGA
CGATGATCTTCTTATTAATGAATCTGTGATCAAAATAAAAGAGGAAGCACCATCGGTAAA
ACAGACATGCAAAACTATGATGTCACAATTAACTACCGAAGGAATGAGCAGTAGAGAACG
GAATCGAGCAAAGAGAAAAGCAAAGTTGTTTATGAAACAAAAAAGCCGAGATAATTCAAA
ACCAGATCCTGACCAACCATCTAGGAAGAAGATAAAAGAAGAGGAAAACCTCGGAATACC
TCCGGATCAAATACCGGAGCATAACTCTTCATCTGATGAGTGGACAGAGTGGCCAATGGA
ATGGATTTCCAGTAATTTGATGAACTTACTGTTAAGTTCATTGTGGGAATCTAGACATGG
GGCGTGTATAGCACTTCGACAAATCATAATCAAGCATGGAGGGGGGTGTGGCAAGATCAG
AGGAATGAATTATGATGAGTTGACTGATCACCACCAGTCATGGTTGACTGACCTTGCCAT
TAGGTTACTTTGTGTCATCACGCTTGATCGCTTTGCAGATTACATATCAGATCAGGTTGT
TGCTCCAGTTCGAGAATCATATTGTGAAAGTTCTCTTACATTTGCTCACCAAGCCACAAT
GGGAGTTGCGACAAGGGGCAATGCTGTGTGTGCAATATATTATTGCTGTCAAACTGCAAA
ATGTTTGCTACCAATAACTGACCATTTGATGACAGAAGAACCGGCGTTAAACAAGCTTCT
GTCTGTGTTGTGGAACTCACTGAGCGAATATGATGAACTAACAGCATCCACTCAATCTGT
TCTACTTCTATTATCAAAGCTCATCAAATCATTACCGCTTAATATTATATGCCAGGGATT
TGAACCCAGAGTCTTGGTGTTGCGGTTACTACCATTCTTCCACCATGTGTTAACATGTGT
GAAAGAAGCTGCACTTTCTACAATGCTGGTAGTTATAGAGGCTTCAGAGAATGCAAGAGA
TTGGATGACATCTGTCTCCAGTGATGCCACATGGAATTTACTCCAGTGTTGCCTTTTAGA
AACAAAGTCTAACACCAGAGACCTCAGTTCAAAAGTTTTTATAAGTTTTGTCCGAAGTTG
CCCCACCGAAGCAATATCATCTTGTTTCCCTTACATACCGATGTGGTTGAACCTCGCATA
TTACCCGGAGTCTGTCCCTATACCACCTACTATGCTGGTACAACACACTGGAATGAAAAA
CAGCGACAACTTAACTGAAGGTCACAAGAAGCACATTGGTGGACTCGCCTCTTCATCTCC
ATCTAGTGACGAACATATTATGGCAACGCGACAATGCATTGCATGTTTAATTGGAGCAGT
ATGCTGCCATGGCAACAACAATATTGAGCAACCCACGCAAACAACTACTAACGTGGAAAA
CCATCTTCTTCTACTTATGACGTCACAATCAGCGTTTCAGCGTATGGTTGCCTGCATTGT
TGTGTCACAATGGTGGATGGAATCTCATTTAACAGGGGTGGCTACATTATTTTCTGCCAT
TTTTAAAATTTTGGAAGAGACGTTTTATTTTTCGGAAATTTCCGTTCAGTTTATTCACGT
TCAAACTGACATGAAAGCTTTCCTTGCTACTTTGTTGAACAAGAAAGTTGATATTGAGAA
TTTTCCCTCTAAATCTTCCTATTCATTCCATGAAGTATTAGACTTCTGTACAACCCAGGT
CCCATCCACTTTACTGAATAGAGATAAAGATTTACGAGAGCAAAGAAACTTGTTAATGAA
ACTAACAGACCAAGCTTTGAAAGTTCAATTTACTCTCGATAGTCGTGTTAAAGCATTTGC
AGCGAATGCTATTGTCTCCGCAGTGCACTCTAGTGGCCAAAAGGATGATAATTGGAAATT
ACCAACAAAATTAAATCCAATTATACGACCACTTATGGAGTCTTTGAAGTATGAAGAAAA
TGTGACCGTCAGAAATGCTGTGTCATCCTCTGTAGCACGACTCATCTGTTTATGTCGGTC
AAGACAACCGTGCCCGAATCCGAAACTCGTTAAAAATTTGTGCGTTGGTATGATTTCTTT
TACCGCTAGGTGTCCTACTGATGAAAGTGTGCAAAAAGAATTTTCAGATGCGATTCTAAG
CAAATGTTACATCACACAAGCCTCTGTATCACGAGATGGCATCCTTACAATACTAAGAAG
AATAAGCGATTTGCAAACAGAGATAAACAACCGAAAAAGAAAACGAAACATAGCAGAGGA
TGAAACAGCGAACTATATCCCTGAATCTGACCAGGTAAACCCAGCTACTTCAAGTGCAGG
TGCTGTTACCTGCATTCAAACTATTATCAAAATGCATGAAGACAATCTTTTAGAAGTGGT
GCCTACTGTATGGGAGATTCTTTCTACTTTGCAAGATGACATTTCACTCTTGTCCCAAAG
CTTGCTTCTGCTTGAAACAGTTGTTCCTGTTATTAAAGGAAAGAAATTGAAAGAAAAAAT
TTTTGGTTTGGTACCTGGAGTATTGCGCAATCTGTGGCACGAGCATACCAGTATAAGATA
TCTATGTAGTCGATGTGTGGCAGTTTTAACGAACCATATGCCCAACACTATTATGCCAGT
TGTGGTGGATAAGATTCTGCCCCAGTTGGATAACAACCAAAACATCACCCAGCATAGAGG
TTCCATTGAAGCACTTGCAAATATAATTGAGGTGATGGGAACATCTGTTGTGCCATATGC
TGTGTTGATGGTTGTACCTTTACTTGGCTGTATAAGTGACCAGGATACACAGACACGACT
TCTTGCTACTCAATGTTTTGGCCAACTGGTGCAGTACATGCCTGTGGAGTCTGGCATCCC
AGATCCTCCCGATCTACCCGAGGAGTTGATCCGGCAAAAACAGGAAGACCGACGATTCCT
TGAACAATTATTCGACAATTCTTCACTCGACGAATATAAAATCCCCGTTAAAATTAACGC
AAAATTACGACCATACCAAGAAGACGGGGTAAAATGGCTGGCATTTTTGAACCGTTATAA
ACTACATGGCGTTCTATGTGATGATATGGGGTTAGGAAAAACGTTGCAAACCATTTGTAT
TTTGGCTTCTGACCATTTTTATCAAGCCAACAAAAAACAGGAAAATGAAAAATTCCATTC
TGGCAAACTAATTTCTTTAGTTGTGTGTCCACCCACGCTAACCGGTCACTGGGTGGCAGA
AGTGAGGCAGTTCTGTGAATTATTAACTCCCCAACATTATGCAGGCAATCCTACTGAACG
GTTGAGGTTGCAAGGGGAGGTGAAGAAGCATAATCTTGTCATAGCTTCGTACGAGGTTAT
AAGAAATGACATCGAATTTTTCAGTCAAATAAAATGGAATTATTGCGTCCTGGATGAAGG
CCATGCTATCAAGAATGGGAAAAGTAAATTATCCCAATGTATCAAGTCTCTATATGCTAA
GCATAGACTTATTTTAACTGGAACACCAATACAGAACAGTGTATTGGAGCTATGGTCATT
ATTTGATTTCCTAATCCCTGGTTTACTTGGCTCAGAGTCAGAATTTAACGCAAGATATTC
CAAACCTATCATTGCAAGTAGAGACGCTAAAAGCTCATCTGTTGAGCAGGAGGAAGGATT
AATCGCGATGGAGTCCCTGCATCGTCAAGTCCTCCCGTTTATGCTCCGAAGGATGAAAGA
GGATGTTCTTAAGGATTTACCTCCAAAGATAATCCAAGATTATTATTGTGAGCTCAGTCC
TCTGCAATTTCAACTTTACGAGGATTTTGCGAAGAGTCGAGCGAAGAAAGATGCCGAGTC
GTCCATTAAGATCATAGATGAAGAGAAAGATCAAACGAACCTCATGAAGGGGACTTCCCA
TGTATTTCAGGCGCTGCAATATCTTCAGAAAGTTTGCAACCATCCTCTGTTCGTATTAAC
GCCGAGTCATCCCCAGTACAACGCTATTATGACTCAGCTAAAAAAATCGAAAACTTCTCT
TCATGACGTGAAACATGCTTCGAAACTGACCGCGTTACAACAGTTGCTACTTGACTGTGG
GATTGGAAAAACTGGTGACTCACTTTCTGAGGAGTCTGTGGCCAATCAGCATCGAGCGCT
CGTGTTTTGTCAACATAGAAATCTTCTAAACATCATTGAGAATGATTTGCTGCGTCAACT
TATGCCTGGTGTAACTTATCTAAGACTGGATGGTGGGGTTCCTTCAAATCAAAGATATTC
CATTGTTTCAAAGTTCAATAATGATCCATCCATCGACTTACTTTTACTAACCACTAAAGT
TGGGGGATTGGGCTTAAACTTAACTGGAGCTGACACTGTTATATTTGTGGAGCATGACTG
GAATCCTATGGTGGATTTACAGGCAATGGACCGAGCCCACCGCATTGGACAGAAGAAAGT
GGTGAACGTATATCGTATAATTACTCGTGGTACAATGGAAGAAAAAATCCTTGGTTTGCA
AGAATTTAAACTTAATGTTGCGAATACCATAGTTGGTGATGATAACAGGGGAATACAGAG
CATGGGAACCAACCAAGTGCTGGATCTGTTTAATGTTGACCAGTCCACCCCGAAAAGCCA
CCCTCACAGCAACGATGCCACAAACCCAAGTAAAGGGCTTCGTGCTATGATGGAAGGGTT
GGGCGAACTGTGGGACCAGAATCAATATGATGAAGAATATAACTTGGATAACTTTCTGCA
TTCGCTTACTAAGTGATTGGTGGAAATATTGGAAAGGTTTACTTAGCGTTAAAATATGTC
AAACTAAATGTCAAAATTAAGTTTAACTGAAATATTTACTTGAAATTCAGTTAAATTTAT
CTGCAAACTTAGGGGTAACTAAATTTTGTTTTAAATATGCATTTGTAATTCCAATGCTGC
TTCGAAGTACACTAATACCCTTTTTGCATGGTCACTTTTATGCGCGTAAGTACTCGCATA
TTTACTCGCAAACGCTTATGACGTTATGCGTGTTAACTTTGTTTTTGCGAGTAAATATGT
GAGTACTTACGCGCATAAAAGTAACCATGCAAAAAGGGTATAATATTCCTTTTTGTACAC
ATTTGCTCATTTTCAAATATTCATTTTCATTCTAGTTTC
| SUPERFAMILY |
ARM-type_fold (IPR016024) - T[13-78] 8.51E-53 - T[267-352] 8.51E-53 - T[408-544] 8.51E-53 - T[585-690] 8.51E-53 - T[770-854] 8.51E-53 - T[938-1199] 8.51E-53 |
| Pfam |
DUF3535 (IPR022707) - T[527-961] 1.4E-72 |
| Gene3D |
ARM-like (IPR011989) - T[913-1116] 2.6E-10 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[1119-1392] 1.72E-57 - T[1394-1691] 2.66E-65 |
| Gene3D |
SNF2-like_sf (IPR038718) - T[1126-1391] 1.1E-70 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[1153-1349] 8.6E-30 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1169-1342] 21.977 |
| Pfam |
SNF2_N (IPR000330) - T[1176-1471] 1.9E-59 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[1515-1677] 16.444 |
| CDD |
Helicase_C (IPR001650) - T[1521-1639] 1.03461E-26 |
| Pfam |
Helicase_C (IPR001650) - T[1526-1631] 2.8E-17 |
| SMART |
Helicase_C (IPR001650) - T[1545-1631] 3.5E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BTAF1_HUMAN | 42.027 % | 1415 | 0 |
| ERCC6_HUMAN | 34.414 % | 290 | 1.96E-79 |
| SMCA2_HUMAN | 33.719 % | 280 | 4.68E-76 |