- Transcript 'KH2012:KH.C12.47.v2....'
Transcript Model
Transcript Id
KH2012:KH.C12.47.v2.A.nonSL10-1
Possible name(s)
PDHA1; PDHA2; RPS18
Gene model
Location
KhC12 [1,592,057 / 1,597,310]
Amino acid sequence
Length: 518
>KH.C12.47.v2.A.nonSL10-1
KHVSKMSLVIPEKFQHILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKR
AGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLK
KIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPIDTHKLENTPATE
VQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCAGIEASLTPKDD
VITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYGGNGIVGAQVPL
GAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVCENNRYGMGTSV
ERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILMELVTYRYHGHSM
SDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVKQHVENETAKAL
ASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV
Nucleotide sequence
Length: 2,049
>KH2012:KH.C12.47.v2.A.nonSL10-1
GTAAGCACGTTAGCAAGATGTCCTTAGTAATCCCGGAGAAGTTTCAGCACATTCTTCGTA
TTTTAAATACGAATATTGATGGTCGCCGTCATATCGCATTCGCCTTGACCGCCATCAAGG
GAATCGGCCGCAGGTTTAGCACTCTGGTGTGCAAAAAAGCCGACGTTGATCTTACGAAAC
GCGCCGGGGAGCTTTCCGATGATGAGATTGATCGCATCGTCACGATCATGCAAAACCCTC
GCCAGTACAAGATTCCCGACTGGTTTTTGAATAGACAAAAGGATGTTCGTGATGGCAAGT
TTGGTCAAATTCTTTCCAACCAGCTTGACAACAAACTTCGTGAAGACATCGAACGTTTGA
AGAAGATTCGTGCTCACAGGGGTTTGCGACACTACTGGGGCCTCCGTGTTCGAGGCCAAC
ACACCAAAACCACAGGACGGCGTGGTCGAACTCCCTTGGGTGTTCGAACTTATTCTGTGG
AAGCAACATTTCCCATCAAACCAATTGACACACACAAGCTTGAAAACACACCTGCAACTG
AAGTACAGATCAACAAAGATGATGCAATATCTTACTACACGAAAATGCAAATTATTCGTC
GAATGGAGCTGAAAGCTGATCAACTGTACAAACAAAAAATAATTCGAGGATTCTGTCATT
TGTATGATGGGCAGGAAGCTTGTTGTGCTGGTATTGAGGCATCACTGACTCCAAAGGACG
ATGTGATCACTGCATATCGTGCTCATGGCTGGGCTTACATCAGGGGTGTACCTGTTTGCA
ACATTCTAGCTGAACTATTTGGTCGAAAGCTTGGCTGTGCTAAAGGCAAGGGAGGTTCCA
TGCATATGTACAGCAAGAATTTCTATGGCGGCAATGGTATTGTTGGTGCACAAGTACCAC
TTGGTGCAGGAATTGCATTCGCCCACAAATACAGAAACAGTGACACAGTAACCGTTGCAT
GTTATGGAGATGGAGCAGCTAACCAGGGTCAAATATTTGAATCATTCAACATGTCACAAC
TGTGGAAGCTGCCTGCTATATTTGTATGCGAGAACAACCGCTATGGTATGGGCACATCAG
TGGAAAGGGCATCAGCAAGTACAGATTATTTTACTCGAGGCGATTACATTCCTGGTTTAA
GAGTTGATGGAATGGATGTTCTTGCTGTACGTGAAGCAACGAGGTTTGCAAAGGAACATG
CAGTTAAAGAGGGCCCAATATTGATGGAACTTGTTACATACAGATATCATGGACACAGCA
TGAGTGACCCTGGTACAAGTTATCGTACGCGAGATGAAGTCAAAGAAATTCGACAGAATT
TGGATCCGATTATGAATTTCCGTGAAAAGATAATTTCTGCAGGTTTCGTTACCAAACAAG
ACGTTGCGACAATCGATGCTGAAGTGAAACAACATGTTGAAAACGAAACTGCAAAAGCTC
TTGCCTCAACTGAGCCGGATTTTGATCAAATTGCTTGCGACATTTATGTCACTGACACCC
CCCTTTCTATCCGATCCTGCAACATTTACAACCAGCTACACCACCAGCCATCTGTCTAAA
TATTCTGTTTGCACCATTTTCGTTTACCTTTCTCTTATATTTTTCAAACTAAAAATTCTA
ATATATATATAAATCTCGTATTGCAGGTTGAATTAAGACCGTGATACATTAAATTATCAT
AAAGATGTTTATGCTTTAGTAGTAAAGAGGTTAGTACTGTACAAAGGTAGAAAGATATTT
ATATTATTCCTTCCAATGTGCAACACTGTTTTACGCGAAAGTGTTCCGGAATCTTTCAGT
TCGCTGTCTTCCTGCTTGGTTGGTGAAGTTTATTAGTCGAATACCTCGTAACCGAACCGT
TGGATGATCGACGTTGGTACATGTATAAATGATTTGACGTCCTGTTCAGCAATGCACTTA
CTATATTGCATCGGCCCAATAGTTTTGTACAGAGAATGATCATCTGAAGTTGCAGAGGTA
TTAGCTCTCTAGCGTACGCTTCCGTTTCGCGATAACTTGCTTCAACCGTATGGTTCTTTC
TGGGTTGTC
| Hamap |
Ribosomal_S13 (IPR001892) - T[17-158] 22.803 |
| SUPERFAMILY |
Ribosomal_S13-like_H2TH (IPR010979) - T[18-150] 3.3E-36 |
| Pfam |
Ribosomal_S13 (IPR001892) - T[19-147] 4.7E-54 |
| ProSiteProfiles |
Ribosomal_S13 (IPR001892) - T[20-150] 35.364 |
| Gene3D |
30s_Rbsml_prot_S13_C (IPR027437) - T[97-144] 1.8E-26 |
| ProSitePatterns |
Ribosomal_S13_CS (IPR018269) - T[126-139] . |
| SUPERFAMILY |
THDP-binding (IPR029061) - T[177-509] 5.16E-101 |
| TIGRFAM |
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[186-495] 1.4E-128 |
| Pfam |
DH_E1 (IPR001017) - T[194-485] 6.7E-116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ODPAT_HUMAN | 57.222 % | 444 | 5.47E-154 |
| ODPA_HUMAN | 61.111 % | 452 | 4.63E-157 |
| RS18_HUMAN | 82.759 % | 266 | 4.99E-88 |