Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Clone 'cijv047h15'
  2. Clone 'cien222086'
  3. Clone 'cieg030d13'
  4. Transcript 'KH2012:KH.C12.47.v2....'

Transcript Model

Transcript Id

KH2012:KH.C12.47.v2.A.nonSL10-1

Possible name(s)

PDHA1; PDHA2; RPS18

Location

KhC12 [1,592,057 / 1,597,310]

Sequences

Amino acid sequence

Length: 518

>KH.C12.47.v2.A.nonSL10-1
KHVSKMSLVIPEKFQHILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLTKR
AGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLK
KIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPIDTHKLENTPATE
VQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCAGIEASLTPKDD
VITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYGGNGIVGAQVPL
GAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVCENNRYGMGTSV
ERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILMELVTYRYHGHSM
SDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVKQHVENETAKAL
ASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV

Nucleotide sequence

Length: 2,049

>KH2012:KH.C12.47.v2.A.nonSL10-1
GTAAGCACGTTAGCAAGATGTCCTTAGTAATCCCGGAGAAGTTTCAGCACATTCTTCGTA
TTTTAAATACGAATATTGATGGTCGCCGTCATATCGCATTCGCCTTGACCGCCATCAAGG
GAATCGGCCGCAGGTTTAGCACTCTGGTGTGCAAAAAAGCCGACGTTGATCTTACGAAAC
GCGCCGGGGAGCTTTCCGATGATGAGATTGATCGCATCGTCACGATCATGCAAAACCCTC
GCCAGTACAAGATTCCCGACTGGTTTTTGAATAGACAAAAGGATGTTCGTGATGGCAAGT
TTGGTCAAATTCTTTCCAACCAGCTTGACAACAAACTTCGTGAAGACATCGAACGTTTGA
AGAAGATTCGTGCTCACAGGGGTTTGCGACACTACTGGGGCCTCCGTGTTCGAGGCCAAC
ACACCAAAACCACAGGACGGCGTGGTCGAACTCCCTTGGGTGTTCGAACTTATTCTGTGG
AAGCAACATTTCCCATCAAACCAATTGACACACACAAGCTTGAAAACACACCTGCAACTG
AAGTACAGATCAACAAAGATGATGCAATATCTTACTACACGAAAATGCAAATTATTCGTC
GAATGGAGCTGAAAGCTGATCAACTGTACAAACAAAAAATAATTCGAGGATTCTGTCATT
TGTATGATGGGCAGGAAGCTTGTTGTGCTGGTATTGAGGCATCACTGACTCCAAAGGACG
ATGTGATCACTGCATATCGTGCTCATGGCTGGGCTTACATCAGGGGTGTACCTGTTTGCA
ACATTCTAGCTGAACTATTTGGTCGAAAGCTTGGCTGTGCTAAAGGCAAGGGAGGTTCCA
TGCATATGTACAGCAAGAATTTCTATGGCGGCAATGGTATTGTTGGTGCACAAGTACCAC
TTGGTGCAGGAATTGCATTCGCCCACAAATACAGAAACAGTGACACAGTAACCGTTGCAT
GTTATGGAGATGGAGCAGCTAACCAGGGTCAAATATTTGAATCATTCAACATGTCACAAC
TGTGGAAGCTGCCTGCTATATTTGTATGCGAGAACAACCGCTATGGTATGGGCACATCAG
TGGAAAGGGCATCAGCAAGTACAGATTATTTTACTCGAGGCGATTACATTCCTGGTTTAA
GAGTTGATGGAATGGATGTTCTTGCTGTACGTGAAGCAACGAGGTTTGCAAAGGAACATG
CAGTTAAAGAGGGCCCAATATTGATGGAACTTGTTACATACAGATATCATGGACACAGCA
TGAGTGACCCTGGTACAAGTTATCGTACGCGAGATGAAGTCAAAGAAATTCGACAGAATT
TGGATCCGATTATGAATTTCCGTGAAAAGATAATTTCTGCAGGTTTCGTTACCAAACAAG
ACGTTGCGACAATCGATGCTGAAGTGAAACAACATGTTGAAAACGAAACTGCAAAAGCTC
TTGCCTCAACTGAGCCGGATTTTGATCAAATTGCTTGCGACATTTATGTCACTGACACCC
CCCTTTCTATCCGATCCTGCAACATTTACAACCAGCTACACCACCAGCCATCTGTCTAAA
TATTCTGTTTGCACCATTTTCGTTTACCTTTCTCTTATATTTTTCAAACTAAAAATTCTA
ATATATATATAAATCTCGTATTGCAGGTTGAATTAAGACCGTGATACATTAAATTATCAT
AAAGATGTTTATGCTTTAGTAGTAAAGAGGTTAGTACTGTACAAAGGTAGAAAGATATTT
ATATTATTCCTTCCAATGTGCAACACTGTTTTACGCGAAAGTGTTCCGGAATCTTTCAGT
TCGCTGTCTTCCTGCTTGGTTGGTGAAGTTTATTAGTCGAATACCTCGTAACCGAACCGT
TGGATGATCGACGTTGGTACATGTATAAATGATTTGACGTCCTGTTCAGCAATGCACTTA
CTATATTGCATCGGCCCAATAGTTTTGTACAGAGAATGATCATCTGAAGTTGCAGAGGTA
TTAGCTCTCTAGCGTACGCTTCCGTTTCGCGATAACTTGCTTCAACCGTATGGTTCTTTC
TGGGTTGTC

InterProScan

Hamap
Ribosomal_S13 (IPR001892) - T[17-158] 22.803
SUPERFAMILY
Ribosomal_S13-like_H2TH (IPR010979) - T[18-150] 3.3E-36
Pfam
Ribosomal_S13 (IPR001892) - T[19-147] 4.7E-54
ProSiteProfiles
Ribosomal_S13 (IPR001892) - T[20-150] 35.364
Gene3D
30s_Rbsml_prot_S13_C (IPR027437) - T[97-144] 1.8E-26
ProSitePatterns
Ribosomal_S13_CS (IPR018269) - T[126-139] .
SUPERFAMILY
THDP-binding (IPR029061) - T[177-509] 5.16E-101
TIGRFAM
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[186-495] 1.4E-128
Pfam
DH_E1 (IPR001017) - T[194-485] 6.7E-116

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ODPAT_HUMAN 57.222 % 444 5.47E-154
ODPA_HUMAN 61.111 % 452 4.63E-157
RS18_HUMAN 82.759 % 266 4.99E-88