- Transcript 'Haaura.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C12.47.v2....'
Transcript Model
Transcript Id
KH2012:KH.C12.47.v2.A.nonSL11-1
Possible name(s)
PDHA1; PDHA2; RPS18
Gene model
Location
KhC12 [1,592,041 / 1,597,310]
Amino acid sequence
Length: 520
>KH.C12.47.v2.A.nonSL11-1
ARKHVSKMSLVIPEKFQHILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLT
KRAGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIER
LKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPIDTHKLENTPA
TEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCAGIEASLTPK
DDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYGGNGIVGAQV
PLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVCENNRYGMGT
SVERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILMELVTYRYHGH
SMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVKQHVENETAK
ALASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV
Nucleotide sequence
Length: 2,065
>KH2012:KH.C12.47.v2.A.nonSL11-1
GATCAAGGGTGAGCTCGTAAGCACGTTAGCAAGATGTCCTTAGTAATCCCGGAGAAGTTT
CAGCACATTCTTCGTATTTTAAATACGAATATTGATGGTCGCCGTCATATCGCATTCGCC
TTGACCGCCATCAAGGGAATCGGCCGCAGGTTTAGCACTCTGGTGTGCAAAAAAGCCGAC
GTTGATCTTACGAAACGCGCCGGGGAGCTTTCCGATGATGAGATTGATCGCATCGTCACG
ATCATGCAAAACCCTCGCCAGTACAAGATTCCCGACTGGTTTTTGAATAGACAAAAGGAT
GTTCGTGATGGCAAGTTTGGTCAAATTCTTTCCAACCAGCTTGACAACAAACTTCGTGAA
GACATCGAACGTTTGAAGAAGATTCGTGCTCACAGGGGTTTGCGACACTACTGGGGCCTC
CGTGTTCGAGGCCAACACACCAAAACCACAGGACGGCGTGGTCGAACTCCCTTGGGTGTT
CGAACTTATTCTGTGGAAGCAACATTTCCCATCAAACCAATTGACACACACAAGCTTGAA
AACACACCTGCAACTGAAGTACAGATCAACAAAGATGATGCAATATCTTACTACACGAAA
ATGCAAATTATTCGTCGAATGGAGCTGAAAGCTGATCAACTGTACAAACAAAAAATAATT
CGAGGATTCTGTCATTTGTATGATGGGCAGGAAGCTTGTTGTGCTGGTATTGAGGCATCA
CTGACTCCAAAGGACGATGTGATCACTGCATATCGTGCTCATGGCTGGGCTTACATCAGG
GGTGTACCTGTTTGCAACATTCTAGCTGAACTATTTGGTCGAAAGCTTGGCTGTGCTAAA
GGCAAGGGAGGTTCCATGCATATGTACAGCAAGAATTTCTATGGCGGCAATGGTATTGTT
GGTGCACAAGTACCACTTGGTGCAGGAATTGCATTCGCCCACAAATACAGAAACAGTGAC
ACAGTAACCGTTGCATGTTATGGAGATGGAGCAGCTAACCAGGGTCAAATATTTGAATCA
TTCAACATGTCACAACTGTGGAAGCTGCCTGCTATATTTGTATGCGAGAACAACCGCTAT
GGTATGGGCACATCAGTGGAAAGGGCATCAGCAAGTACAGATTATTTTACTCGAGGCGAT
TACATTCCTGGTTTAAGAGTTGATGGAATGGATGTTCTTGCTGTACGTGAAGCAACGAGG
TTTGCAAAGGAACATGCAGTTAAAGAGGGCCCAATATTGATGGAACTTGTTACATACAGA
TATCATGGACACAGCATGAGTGACCCTGGTACAAGTTATCGTACGCGAGATGAAGTCAAA
GAAATTCGACAGAATTTGGATCCGATTATGAATTTCCGTGAAAAGATAATTTCTGCAGGT
TTCGTTACCAAACAAGACGTTGCGACAATCGATGCTGAAGTGAAACAACATGTTGAAAAC
GAAACTGCAAAAGCTCTTGCCTCAACTGAGCCGGATTTTGATCAAATTGCTTGCGACATT
TATGTCACTGACACCCCCCTTTCTATCCGATCCTGCAACATTTACAACCAGCTACACCAC
CAGCCATCTGTCTAAATATTCTGTTTGCACCATTTTCGTTTACCTTTCTCTTATATTTTT
CAAACTAAAAATTCTAATATATATATAAATCTCGTATTGCAGGTTGAATTAAGACCGTGA
TACATTAAATTATCATAAAGATGTTTATGCTTTAGTAGTAAAGAGGTTAGTACTGTACAA
AGGTAGAAAGATATTTATATTATTCCTTCCAATGTGCAACACTGTTTTACGCGAAAGTGT
TCCGGAATCTTTCAGTTCGCTGTCTTCCTGCTTGGTTGGTGAAGTTTATTAGTCGAATAC
CTCGTAACCGAACCGTTGGATGATCGACGTTGGTACATGTATAAATGATTTGACGTCCTG
TTCAGCAATGCACTTACTATATTGCATCGGCCCAATAGTTTTGTACAGAGAATGATCATC
TGAAGTTGCAGAGGTATTAGCTCTCTAGCGTACGCTTCCGTTTCGCGATAACTTGCTTCA
ACCGTATGGTTCTTTCTGGGTTGTC
| Hamap |
Ribosomal_S13 (IPR001892) - T[19-160] 22.803 |
| SUPERFAMILY |
Ribosomal_S13-like_H2TH (IPR010979) - T[20-152] 3.3E-36 |
| Pfam |
Ribosomal_S13 (IPR001892) - T[21-149] 4.7E-54 |
| ProSiteProfiles |
Ribosomal_S13 (IPR001892) - T[22-152] 35.364 |
| Gene3D |
30s_Rbsml_prot_S13_C (IPR027437) - T[99-146] 1.8E-26 |
| ProSitePatterns |
Ribosomal_S13_CS (IPR018269) - T[128-141] . |
| SUPERFAMILY |
THDP-binding (IPR029061) - T[179-511] 5.16E-101 |
| TIGRFAM |
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[188-497] 1.4E-128 |
| Pfam |
DH_E1 (IPR001017) - T[196-487] 6.8E-116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ODPAT_HUMAN | 57.222 % | 444 | 4.19E-154 |
| ODPA_HUMAN | 61.111 % | 452 | 5.59E-157 |
| RS18_HUMAN | 82.759 % | 267 | 4.39E-88 |