Login
Help

Submit your Data

  1. Transcript 'KH2012:KH.C12.121.v2...'
  2. Transcript 'KH2012:KH.C12.47.v2....'

Transcript Model

Transcript Id

KH2012:KH.C12.47.v2.A.nonSL13-1

Possible name(s)

PDHA1; PDHA2; RPS18

Location

KhC12 [1,592,051 / 1,597,310]

Sequences

Amino acid sequence

Length: 520

>KH.C12.47.v2.A.nonSL13-1
ARKHVSKMSLVIPEKFQHILRILNTNIDGRRHIAFALTAIKGIGRRFSTLVCKKADVDLT
KRAGELSDDEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIER
LKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPIDTHKLENTPA
TEVQINKDDAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCAGIEASLTPK
DDVITAYRAHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYGGNGIVGAQV
PLGAGIAFAHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVCENNRYGMGT
SVERASASTDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILMELVTYRYHGH
SMSDPGTSYRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVKQHVENETAK
ALASTEPDFDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV

Nucleotide sequence

Length: 2,055

>KH2012:KH.C12.47.v2.A.nonSL13-1
GAGCTCGTAAGCACGTTAGCAAGATGTCCTTAGTAATCCCGGAGAAGTTTCAGCACATTC
TTCGTATTTTAAATACGAATATTGATGGTCGCCGTCATATCGCATTCGCCTTGACCGCCA
TCAAGGGAATCGGCCGCAGGTTTAGCACTCTGGTGTGCAAAAAAGCCGACGTTGATCTTA
CGAAACGCGCCGGGGAGCTTTCCGATGATGAGATTGATCGCATCGTCACGATCATGCAAA
ACCCTCGCCAGTACAAGATTCCCGACTGGTTTTTGAATAGACAAAAGGATGTTCGTGATG
GCAAGTTTGGTCAAATTCTTTCCAACCAGCTTGACAACAAACTTCGTGAAGACATCGAAC
GTTTGAAGAAGATTCGTGCTCACAGGGGTTTGCGACACTACTGGGGCCTCCGTGTTCGAG
GCCAACACACCAAAACCACAGGACGGCGTGGTCGAACTCCCTTGGGTGTTCGAACTTATT
CTGTGGAAGCAACATTTCCCATCAAACCAATTGACACACACAAGCTTGAAAACACACCTG
CAACTGAAGTACAGATCAACAAAGATGATGCAATATCTTACTACACGAAAATGCAAATTA
TTCGTCGAATGGAGCTGAAAGCTGATCAACTGTACAAACAAAAAATAATTCGAGGATTCT
GTCATTTGTATGATGGGCAGGAAGCTTGTTGTGCTGGTATTGAGGCATCACTGACTCCAA
AGGACGATGTGATCACTGCATATCGTGCTCATGGCTGGGCTTACATCAGGGGTGTACCTG
TTTGCAACATTCTAGCTGAACTATTTGGTCGAAAGCTTGGCTGTGCTAAAGGCAAGGGAG
GTTCCATGCATATGTACAGCAAGAATTTCTATGGCGGCAATGGTATTGTTGGTGCACAAG
TACCACTTGGTGCAGGAATTGCATTCGCCCACAAATACAGAAACAGTGACACAGTAACCG
TTGCATGTTATGGAGATGGAGCAGCTAACCAGGGTCAAATATTTGAATCATTCAACATGT
CACAACTGTGGAAGCTGCCTGCTATATTTGTATGCGAGAACAACCGCTATGGTATGGGCA
CATCAGTGGAAAGGGCATCAGCAAGTACAGATTATTTTACTCGAGGCGATTACATTCCTG
GTTTAAGAGTTGATGGAATGGATGTTCTTGCTGTACGTGAAGCAACGAGGTTTGCAAAGG
AACATGCAGTTAAAGAGGGCCCAATATTGATGGAACTTGTTACATACAGATATCATGGAC
ACAGCATGAGTGACCCTGGTACAAGTTATCGTACGCGAGATGAAGTCAAAGAAATTCGAC
AGAATTTGGATCCGATTATGAATTTCCGTGAAAAGATAATTTCTGCAGGTTTCGTTACCA
AACAAGACGTTGCGACAATCGATGCTGAAGTGAAACAACATGTTGAAAACGAAACTGCAA
AAGCTCTTGCCTCAACTGAGCCGGATTTTGATCAAATTGCTTGCGACATTTATGTCACTG
ACACCCCCCTTTCTATCCGATCCTGCAACATTTACAACCAGCTACACCACCAGCCATCTG
TCTAAATATTCTGTTTGCACCATTTTCGTTTACCTTTCTCTTATATTTTTCAAACTAAAA
ATTCTAATATATATATAAATCTCGTATTGCAGGTTGAATTAAGACCGTGATACATTAAAT
TATCATAAAGATGTTTATGCTTTAGTAGTAAAGAGGTTAGTACTGTACAAAGGTAGAAAG
ATATTTATATTATTCCTTCCAATGTGCAACACTGTTTTACGCGAAAGTGTTCCGGAATCT
TTCAGTTCGCTGTCTTCCTGCTTGGTTGGTGAAGTTTATTAGTCGAATACCTCGTAACCG
AACCGTTGGATGATCGACGTTGGTACATGTATAAATGATTTGACGTCCTGTTCAGCAATG
CACTTACTATATTGCATCGGCCCAATAGTTTTGTACAGAGAATGATCATCTGAAGTTGCA
GAGGTATTAGCTCTCTAGCGTACGCTTCCGTTTCGCGATAACTTGCTTCAACCGTATGGT
TCTTTCTGGGTTGTC

InterProScan

Hamap
Ribosomal_S13 (IPR001892) - T[19-160] 22.803
SUPERFAMILY
Ribosomal_S13-like_H2TH (IPR010979) - T[20-152] 3.3E-36
Pfam
Ribosomal_S13 (IPR001892) - T[21-149] 4.7E-54
ProSiteProfiles
Ribosomal_S13 (IPR001892) - T[22-152] 35.364
Gene3D
30s_Rbsml_prot_S13_C (IPR027437) - T[99-146] 1.8E-26
ProSitePatterns
Ribosomal_S13_CS (IPR018269) - T[128-141] .
SUPERFAMILY
THDP-binding (IPR029061) - T[179-511] 5.16E-101
TIGRFAM
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[188-497] 1.4E-128
Pfam
DH_E1 (IPR001017) - T[196-487] 6.8E-116

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ODPAT_HUMAN 57.222 % 444 4.19E-154
ODPA_HUMAN 61.111 % 452 5.59E-157
RS18_HUMAN 82.759 % 267 4.39E-88





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.