- Region 'REG00000868' >
- Clone 'cima8116351' >
- Transcript 'KH2012:KH.C12.47.v2....'
Transcript Model
Transcript Id
KH2012:KH.C12.47.v2.A.nonSL18-1
Possible name(s)
PDHA1; PDHA2; RPS18
Gene model
Location
KhC12 [1,592,257 / 1,597,310]
Amino acid sequence
Length: 452
>KH.C12.47.v2.A.nonSL18-1
DEIDRIVTIMQNPRQYKIPDWFLNRQKDVRDGKFGQILSNQLDNKLREDIERLKKIRAHR
GLRHYWGLRVRGQHTKTTGRRGRTPLGVRTYSVEATFPIKPIDTHKLENTPATEVQINKD
DAISYYTKMQIIRRMELKADQLYKQKIIRGFCHLYDGQEACCAGIEASLTPKDDVITAYR
AHGWAYIRGVPVCNILAELFGRKLGCAKGKGGSMHMYSKNFYGGNGIVGAQVPLGAGIAF
AHKYRNSDTVTVACYGDGAANQGQIFESFNMSQLWKLPAIFVCENNRYGMGTSVERASAS
TDYFTRGDYIPGLRVDGMDVLAVREATRFAKEHAVKEGPILMELVTYRYHGHSMSDPGTS
YRTRDEVKEIRQNLDPIMNFREKIISAGFVTKQDVATIDAEVKQHVENETAKALASTEPD
FDQIACDIYVTDTPLSIRSCNIYNQLHHQPSV
Nucleotide sequence
Length: 1,849
>KH2012:KH.C12.47.v2.A.nonSL18-1
GATGAGATTGATCGCATCGTCACGATCATGCAAAACCCTCGCCAGTACAAGATTCCCGAC
TGGTTTTTGAATAGACAAAAGGATGTTCGTGATGGCAAGTTTGGTCAAATTCTTTCCAAC
CAGCTTGACAACAAACTTCGTGAAGACATCGAACGTTTGAAGAAGATTCGTGCTCACAGG
GGTTTGCGACACTACTGGGGCCTCCGTGTTCGAGGCCAACACACCAAAACCACAGGACGG
CGTGGTCGAACTCCCTTGGGTGTTCGAACTTATTCTGTGGAAGCAACATTTCCCATCAAA
CCAATTGACACACACAAGCTTGAAAACACACCTGCAACTGAAGTACAGATCAACAAAGAT
GATGCAATATCTTACTACACGAAAATGCAAATTATTCGTCGAATGGAGCTGAAAGCTGAT
CAACTGTACAAACAAAAAATAATTCGAGGATTCTGTCATTTGTATGATGGGCAGGAAGCT
TGTTGTGCTGGTATTGAGGCATCACTGACTCCAAAGGACGATGTGATCACTGCATATCGT
GCTCATGGCTGGGCTTACATCAGGGGTGTACCTGTTTGCAACATTCTAGCTGAACTATTT
GGTCGAAAGCTTGGCTGTGCTAAAGGCAAGGGAGGTTCCATGCATATGTACAGCAAGAAT
TTCTATGGCGGCAATGGTATTGTTGGTGCACAAGTACCACTTGGTGCAGGAATTGCATTC
GCCCACAAATACAGAAACAGTGACACAGTAACCGTTGCATGTTATGGAGATGGAGCAGCT
AACCAGGGTCAAATATTTGAATCATTCAACATGTCACAACTGTGGAAGCTGCCTGCTATA
TTTGTATGCGAGAACAACCGCTATGGTATGGGCACATCAGTGGAAAGGGCATCAGCAAGT
ACAGATTATTTTACTCGAGGCGATTACATTCCTGGTTTAAGAGTTGATGGAATGGATGTT
CTTGCTGTACGTGAAGCAACGAGGTTTGCAAAGGAACATGCAGTTAAAGAGGGCCCAATA
TTGATGGAACTTGTTACATACAGATATCATGGACACAGCATGAGTGACCCTGGTACAAGT
TATCGTACGCGAGATGAAGTCAAAGAAATTCGACAGAATTTGGATCCGATTATGAATTTC
CGTGAAAAGATAATTTCTGCAGGTTTCGTTACCAAACAAGACGTTGCGACAATCGATGCT
GAAGTGAAACAACATGTTGAAAACGAAACTGCAAAAGCTCTTGCCTCAACTGAGCCGGAT
TTTGATCAAATTGCTTGCGACATTTATGTCACTGACACCCCCCTTTCTATCCGATCCTGC
AACATTTACAACCAGCTACACCACCAGCCATCTGTCTAAATATTCTGTTTGCACCATTTT
CGTTTACCTTTCTCTTATATTTTTCAAACTAAAAATTCTAATATATATATAAATCTCGTA
TTGCAGGTTGAATTAAGACCGTGATACATTAAATTATCATAAAGATGTTTATGCTTTAGT
AGTAAAGAGGTTAGTACTGTACAAAGGTAGAAAGATATTTATATTATTCCTTCCAATGTG
CAACACTGTTTTACGCGAAAGTGTTCCGGAATCTTTCAGTTCGCTGTCTTCCTGCTTGGT
TGGTGAAGTTTATTAGTCGAATACCTCGTAACCGAACCGTTGGATGATCGACGTTGGTAC
ATGTATAAATGATTTGACGTCCTGTTCAGCAATGCACTTACTATATTGCATCGGCCCAAT
AGTTTTGTACAGAGAATGATCATCTGAAGTTGCAGAGGTATTAGCTCTCTAGCGTACGCT
TCCGTTTCGCGATAACTTGCTTCAACCGTATGGTTCTTTCTGGGTTGTC
| Pfam |
Ribosomal_S13 (IPR001892) - T[1-81] 1.1E-32 |
| ProSiteProfiles |
Ribosomal_S13 (IPR001892) - T[1-84] 20.756 |
| SUPERFAMILY |
Ribosomal_S13-like_H2TH (IPR010979) - T[1-84] 4.59E-17 |
| Gene3D |
30s_Rbsml_prot_S13_C (IPR027437) - T[31-78] 1.5E-26 |
| ProSitePatterns |
Ribosomal_S13_CS (IPR018269) - T[60-73] . |
| SUPERFAMILY |
THDP-binding (IPR029061) - T[111-443] 3.19E-101 |
| TIGRFAM |
Pyrv_DH_E1_asu_subgrp-y (IPR017597) - T[120-429] 9.1E-129 |
| Pfam |
DH_E1 (IPR001017) - T[128-419] 4.6E-116 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ODPAT_HUMAN | 57.222 % | 444 | 6.33E-155 |
| ODPA_HUMAN | 61.111 % | 451 | 1.21E-157 |
| RS18_HUMAN | 85.714 % | 165 | 2.36E-49 |