- Transcript 'KH2012:KH.C12.491.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.491.v1.A.SL1-1
Possible name(s)
BMP3; BMP4; GDF10
Gene model
Location
KhC12 [4,643,944 / 4,648,723]
Amino acid sequence
Length: 676
>KH.C12.491.v1.A.SL1-1
RKIYCVIMRLSKTLRIVLVLVVWSVLMYTSSARKNRQRNTEGRRTDVVPRPRRNRVEISD
TRNNTNAANNASAEETALPTTTDARKRKRKNKRQRKRKQRNRRKGKKLRKFAEETASTDL
FSDEVQKELLRNTVSEMFGFDHMTSPRPGQTRSSVPETRVTDIELEQGLPHPPDFMLQLY
KTFSADRDPVMLPSRTQGNTVRSFFSVAGDTLSRPRDKGKPILIVPATSTGSNTAETDLT
ARSLRVFAFNITSIPDTESVVKAELRIDCSTNDEERAGNGHNASRREWQVVLGSYRQHSG
QNGHNETLNFFQRAGNLVRLSQTSATAWTGEHIFDIIRRARRDGHLIIVQFEDELQRHRR
NAAGPLPENHSSREAVSTPVLPDSFTVLDSERSKRNTGRNRHGGQQNRPGDVFDSLAAVS
ASPLLIVYTNDSKTVLTKSSGSLSERILLSSLGNITASLAARNTRFRRSAGTRRGNAARN
GSNSLPGEDTPENEQRSIIPVNLPQSVDNDQTELHDNGLVDRAVIQSLTDQKTARKKKRR
RKPCRKRGRRAKRKCKKASSTAPEADLNGSQQTCSRKSLTVDFADIGWSQWIISPTRFDA
YYCSGLCRFKNIKNAQFSNHAIIQAVIKAFNVRPKIPAPCCVPDEMTTLNVLFFDKDDNV
VLKAYPDMQVKTCGCR
Nucleotide sequence
Length: 2,506
>KH2012:KH.C12.491.v1.A.SL1-1
ATTACTAGAATTTATTAGCGTAAAATATATTGTGTTATAATGAGACTCAGTAAAACCTTA
AGAATTGTCCTCGTACTGGTTGTTTGGAGTGTATTGATGTACACCAGCAGTGCACGGAAG
AACAGGCAACGAAACACCGAAGGCAGACGAACCGATGTCGTCCCCAGGCCCAGAAGAAAC
CGGGTCGAAATAAGCGACACAAGAAATAACACAAACGCTGCCAATAACGCAAGCGCTGAA
GAGACTGCACTTCCAACAACAACGGATGCTCGTAAAAGAAAACGAAAGAATAAACGGCAA
AGAAAGCGAAAGCAGCGCAACCGTCGCAAGGGAAAGAAACTGCGCAAGTTTGCTGAGGAA
ACAGCTTCCACAGATTTGTTCTCCGATGAAGTACAAAAGGAATTATTACGGAACACCGTT
AGCGAAATGTTCGGCTTCGATCATATGACATCACCGAGGCCGGGACAGACTCGGTCCAGC
GTTCCAGAGACCCGAGTTACTGACATCGAGCTCGAGCAAGGCCTTCCCCACCCACCAGAT
TTCATGCTACAACTTTATAAGACTTTCTCCGCCGACAGAGATCCTGTAATGCTACCTTCT
CGCACACAAGGGAACACTGTCCGTAGCTTCTTCTCTGTAGCAGGTGATACGCTCTCTCGG
CCCCGGGATAAAGGAAAACCTATTCTAATCGTACCCGCTACGTCAACCGGGAGCAACACA
GCCGAAACTGACTTAACAGCACGTTCTTTGAGGGTCTTTGCTTTTAACATAACTTCAATT
CCTGACACGGAATCGGTTGTAAAGGCAGAACTACGAATCGACTGTTCGACAAACGACGAG
GAAAGGGCGGGTAACGGTCACAACGCTTCACGCAGAGAATGGCAGGTGGTGTTGGGGAGT
TATCGCCAACATTCGGGGCAAAACGGCCACAACGAAACACTGAACTTTTTCCAGCGAGCC
GGCAATTTGGTGCGATTGTCGCAGACGAGCGCCACCGCGTGGACGGGTGAACACATTTTC
GATATTATCAGGCGAGCAAGAAGAGATGGCCATCTTATAATTGTTCAGTTTGAGGATGAA
TTACAAAGACATAGGCGCAACGCTGCAGGTCCACTGCCAGAAAACCATTCCTCCCGTGAA
GCGGTTTCCACTCCGGTTTTGCCCGACAGCTTTACTGTCTTAGATTCAGAAAGATCGAAG
CGAAATACAGGCCGGAATCGACACGGAGGACAGCAGAACAGACCTGGTGACGTTTTTGAC
AGCCTGGCAGCCGTATCTGCTTCTCCTCTGTTGATCGTTTACACCAACGATTCCAAAACT
GTCTTAACGAAATCTAGCGGCTCACTTTCGGAGAGAATTTTGCTGAGCAGTCTGGGGAAT
ATCACCGCGTCTTTAGCAGCTCGCAACACAAGGTTTCGTAGATCTGCTGGTACTCGAAGG
GGCAACGCTGCTCGTAACGGCAGTAACTCCCTTCCTGGGGAAGATACTCCTGAGAATGAA
CAACGATCCATTATTCCGGTTAACCTTCCGCAATCCGTGGATAACGACCAAACAGAACTG
CACGACAACGGTCTCGTTGATAGGGCAGTCATCCAATCCCTGACCGACCAAAAAACCGCC
CGCAAAAAGAAACGAAGACGTAAACCTTGTCGTAAGCGAGGACGACGAGCGAAGAGGAAA
TGTAAGAAGGCGTCGTCAACCGCACCTGAAGCGGACCTCAACGGATCTCAACAAACGTGT
TCTCGCAAATCGCTAACTGTTGATTTTGCGGACATTGGTTGGTCGCAATGGATAATATCT
CCAACACGATTTGACGCTTACTATTGCTCTGGTTTGTGCAGATTCAAAAATATTAAGAAC
GCACAGTTTTCGAACCACGCCATTATTCAAGCGGTCATCAAAGCTTTTAACGTCCGTCCG
AAGATACCTGCCCCGTGTTGCGTGCCGGATGAAATGACGACACTTAACGTATTATTCTTC
GACAAGGACGATAACGTTGTATTGAAAGCATATCCTGATATGCAAGTTAAAACTTGTGGC
TGTCGATGATCGTGACCAACCACGCCACAGTTGGGCACGAAATCAACAAACCGCACCGGC
CCCTCAGCGGACACCTCACGGTCGGTCACGGGCGAAAATAGCGGAGCAGCTATGGGTGTG
ATTACTCCCTCGCTCCGACAGACAGAAACAGTTTCACCGAACGCTGTAGCATGATAACGT
TTCTTGTTTCTTTTCGTTATAAATTAATTCTGTGCGCAAATCACTTCGTTTTCGTTCTCT
TTTTATTGTATGCGCTTAACCTCGCACAGCAACGGTATATTTTCATACCTGCTGCTGTTT
TCACGTGTTATGTTCCGAAATATTAGCATGCAAACTTACTATGTATTCTTGTTTATGAAT
AAGTAGCAGAAAATTCCGGCTCATAGTAAAGATAGGTCTCATTACTACACATGCAATCGC
AGTAGGCTACCTAATGTTTATAAAGAATAGAACTATCGCTATTGCA
| PANTHER |
TGF-beta-rel (IPR015615) - T[12-676] 1.6E-144 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[136-272] 5.1E-8 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[547-676] 35.865 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[563-676] 6.4E-36 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[568-676] 1.33E-33 |
| Pfam |
TGF-b_C (IPR001839) - T[572-675] 3.3E-30 |
| SMART |
TGF-b_C (IPR001839) - T[574-676] 1.8E-45 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[592-607] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 60.194 % | 156 | 4.03E-41 |
| GDF10_HUMAN | 59.615 % | 152 | 7.18E-40 |
| BMP4_HUMAN | 43.077 % | 121 | 1.01E-29 |