Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.250.v2.A.ND2-1

Possible name(s)

STMND1

Gene model

KH2012:KH.C1.250

Location

KhC1 [6,542,206 / 6,546,114]

Sequences

Amino acid sequence

Length: 320

>KH.C1.250.v2.A.ND2-1
LLTSVASNSRGNQQRRITRLQLKSFLRKRRRVRFYNHLFTMGCGPSKDSVKAITTGEDGQ
IRSKSASKVKVKSAKESAVNESAATIVGATKSTSAKSRDSGIQEMDYESGDIITENSDPN
RVQEVEADGRPETPGRQLTSKSAGRERIKSRAILQELEAEGLITGSKVQKGGAAFEVRAG
PLQPLEPLAPIRRPPPRLEKLKRESSTLTKADLEQKLKAAEERRKKNLEKKTSRLAMQLA
RDRELANKFEADNATLEFEKQLSTDPFNQGRGERTDAIENPLTKKTIFDEASLSSLEDGD
AKPSDDFYTNTVNSNSQIFD

Nucleotide sequence

Length: 1,790

>KH2012:KH.C1.250.v2.A.ND2-1
CGGCCTACCATATCTCTAGAACTAAAAAATATAAGACTGATTGACGGTTGAATGCAAATA
AGCCTTTAATGTTGAAAGGCGACCTACTACTTTAAATGGGCCGAAGTGTTTCGCTTGAGT
AACTGCTGACGTCAGTCGCTAGCAACAGCCGTGGTAACCAACAACGCCGCATAACACGAT
TACAGCTGAAATCATTCCTTCGAAAAAGACGTCGTGTCAGATTTTATAACCATCTCTTTA
CAATGGGGTGTGGGCCTTCTAAAGATAGTGTGAAAGCTATTACCACTGGCGAAGATGGCC
AAATTAGATCAAAAAGTGCATCAAAAGTAAAAGTAAAGTCAGCAAAAGAGTCGGCTGTTA
ATGAATCTGCCGCAACTATCGTTGGAGCAACCAAATCCACATCTGCGAAAAGCAGAGACA
GTGGGATTCAAGAAATGGATTATGAATCAGGAGACATCATCACTGAGAATTCGGATCCTA
ACCGTGTACAAGAAGTTGAGGCTGATGGACGTCCTGAGACACCAGGCAGGCAACTCACCA
GTAAGAGTGCTGGACGAGAACGAATAAAGTCAAGAGCCATTTTACAAGAACTAGAGGCAG
AAGGATTAATAACAGGTTCAAAAGTACAAAAGGGAGGTGCTGCCTTTGAAGTGCGTGCGG
GTCCATTACAACCACTGGAACCCCTGGCCCCCATCCGAAGGCCCCCACCAAGGTTGGAAA
AGTTGAAACGAGAATCGAGTACTTTAACCAAAGCTGATCTTGAACAGAAATTAAAGGCTG
CAGAAGAAAGAAGGAAGAAAAACTTGGAAAAGAAAACTAGTCGACTTGCGATGCAACTTG
CGAGAGACAGAGAATTGGCAAACAAGTTTGAAGCTGATAATGCAACTTTGGAATTTGAAA
AACAACTTTCGACCGATCCATTTAACCAGGGAAGAGGAGAGAGAACTGATGCCATTGAGA
ATCCTCTTACTAAGAAGACTATCTTTGATGAAGCAAGTCTCAGTAGTTTGGAGGATGGAG
ATGCCAAACCATCCGATGACTTTTACACCAACACTGTGAACTCCAACTCACAAATTTTCG
ACTAACTTCTGAAGCACTGGCGCAGAAGGCTCATGCATTCTCTTCAGAAACCTGTAATAT
ACATTTCAAGGATTTGCCCATTAGTCTTCTAAACCTAAAGACTACGTATGGCTAAACATG
TTATGTGTGGCCGAAATGCGACACACCGCTTTCAAACAGCATTATTGCAGTTGATCTTTA
AGCTTATTGTTCTTCCTTTTTCATATTCTTCCACATAGGCAACTTTTTTATGTAAAATTA
CTTCTTCCGTCCAGTGTTTTAAACTGCATGTGCTATAAGATTGCCTTAAACTGTCCATAG
TAACTGAAACTGTTTTCTTTTCATAAAATTTGTGTTTTAGAAATACTTTTTTAAAGCCTT
TTAATGTTTATACCTGTAAACTTATTTTTTTTATAATTTTAGCGAAATAGAAAAATTGAG
TTTTTTGCTTTTGTTAATAAATATACATGCTTTTATATTCAGTCCCTAAATATGCCCTTG
TGACTAACCTATATAACTATATTGTCACGTGTATCTCAAGTTCAAATTGTATTCCCTTTT
TAGTATTTGCTTATTTTTTTACTTTGCCAGTCAAGTGCTCTAAAATATTTTGGTTTATTT
ATTTATTATCAGTTTTCTATCCTTAATAGCATAATAGTTTTAAATTCTCAGTAAAACTAC
CAACCACGTCAAGTACTGGGTTTGGGATTTCAAATTAATTTTCAGTGATA

InterProScan

PANTHER	Stathmin_fam (IPR000956) - T[41-319] 1.5E-70
Pfam	Stathmin_fam (IPR000956) - T[169-256] 4.3E-9
SUPERFAMILY	Stathmin_sf (IPR036002) - T[169-254] 1.7E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value