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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C8.640.v1....' > 
  2. Molecular Tool 'En>Ngn (Stolfi 2011)' > 
  3. Transcript 'KH2012:KH.C2.108.v1....' > 
  4. Transcript 'KH2012:KH.C1.250.v3....'

Transcript Model

Transcript Id

KH2012:KH.C1.250.v3.A.ND4-1

Possible name(s)

STMND1

Gene model

KH2012:KH.C1.250

Location

KhC1 [6,542,206 / 6,547,591]

Sequences

Amino acid sequence

Length: 292

>KH.C1.250.v3.A.ND4-1
FYNHLFTMGCGPSKDSVKAITTGEDGQIRSKSASKVKVKSAKESAVNESAATIVGATKST
SAKSRDSGIQEMDYESGDIITENSDPNRVQEVEADGRPETPDFELVGRQLTSKSAGRERI
KSRAILQELEAEGLITGSKVQKGGAAFEVRAGPLQPLEPLAPIRRPPPRLEKLKRESSTL
TKADLEQKLKAAEERRKKNLEKKTSRLAMQLARDRELANKFEADNATLEFEKQLSTDPFN
QGRGERTDAIENPLTKKTIFDEASLSSLEDGDAKPSDDFYTNTVNSNSQIFD

Nucleotide sequence

Length: 1,797

>KH2012:KH.C1.250.v3.A.ND4-1
CATTTTAAAAACCTTGTATTAAATTTGACTTAAAATTGTTTGGAAAGGTATGTTGCTTTG
ATTGAGGATGTTTCATGTGTGGCAGTTAAGCATATATATATATATACGGTATATGGCGAT
CTGCAGGGAATTTGCATTTGGACATATGCAGGCGAAGGAAAGTTGATGAAACGAAACTTT
ACAACTAGTCGGCTACAAATATAGTAGTATTGATTTTATAACCATCTCTTTACAATGGGG
TGTGGGCCTTCTAAAGATAGTGTGAAAGCTATTACCACTGGCGAAGATGGCCAAATTAGA
TCAAAAAGTGCATCAAAAGTAAAAGTAAAGTCAGCAAAAGAGTCGGCTGTTAATGAATCT
GCCGCAACTATCGTTGGAGCAACCAAATCCACATCTGCGAAAAGCAGAGACAGTGGGATT
CAAGAAATGGATTATGAATCAGGAGACATCATCACTGAGAATTCGGATCCTAACCGTGTA
CAAGAAGTTGAGGCTGATGGACGTCCTGAGACACCAGATTTTGAATTGGTAGGCAGGCAA
CTCACCAGTAAGAGTGCTGGACGAGAACGAATAAAGTCAAGAGCCATTTTACAAGAACTA
GAGGCAGAAGGATTAATAACAGGTTCAAAAGTACAAAAGGGAGGTGCTGCCTTTGAAGTG
CGTGCGGGTCCATTACAACCACTGGAACCCCTGGCCCCCATCCGAAGGCCCCCACCAAGG
TTGGAAAAGTTGAAACGAGAATCGAGTACTTTAACCAAAGCTGATCTTGAACAGAAATTA
AAGGCTGCAGAAGAAAGAAGGAAGAAAAACTTGGAAAAGAAAACTAGTCGACTTGCGATG
CAACTTGCGAGAGACAGAGAATTGGCAAACAAGTTTGAAGCTGATAATGCAACTTTGGAA
TTTGAAAAACAACTTTCGACCGATCCATTTAACCAGGGAAGAGGAGAGAGAACTGATGCC
ATTGAGAATCCTCTTACTAAGAAGACTATCTTTGATGAAGCAAGTCTCAGTAGTTTGGAG
GATGGAGATGCCAAACCATCCGATGACTTTTACACCAACACTGTGAACTCCAACTCACAA
ATTTTCGACTAACTTCTGAAGCACTGGCGCAGAAGGCTCATGCATTCTCTTCAGAAACCT
GTAATATACATTTCAAGGATTTGCCCATTAGTCTTCTAAACCTAAAGACTACGTATGGCT
AAACATGTTATGTGTGGCCGAAATGCGACACACCGCTTTCAAACAGCATTATTGCAGTTG
ATCTTTAAGCTTATTGTTCTTCCTTTTTCATATTCTTCCACATAGGCAACTTTTTTATGT
AAAATTACTTCTTCCGTCCAGTGTTTTAAACTGCATGTGCTATAAGATTGCCTTAAACTG
TCCATAGTAACTGAAACTGTTTTCTTTTCATAAAATTTGTGTTTTAGAAATACTTTTTTA
AAGCCTTTTAATGTTTATACCTGTAAACTTATTTTTTTTATAATTTTAGCGAAATAGAAA
AATTGAGTTTTTTGCTTTTGTTAATAAATATACATGCTTTTATATTCAGTCCCTAAATAT
GCCCTTGTGACTAACCTATATAACTATATTGTCACGTGTATCTCAAGTTCAAATTGTATT
CCCTTTTTAGTATTTGCTTATTTTTTTACTTTGCCAGTCAAGTGCTCTAAAATATTTTGG
TTTATTTATTTATTATCAGTTTTCTATCCTTAATAGCATAATAGTTTTAAATTCTCAGTA
AAACTACCAACCACGTCAAGTACTGGGTTTGGGATTTCAAATTAATTTTCAGTGATA

InterProScan

PANTHER
Stathmin_fam (IPR000956) - T[8-291] 1.1E-70
Pfam
Stathmin_fam (IPR000956) - T[141-228] 3.6E-9
SUPERFAMILY
Stathmin_sf (IPR036002) - T[141-226] 1.44E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value