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- Transcript 'KH2012:KH.C12.578.v2...'
Transcript Model
Transcript Id
KH2012:KH.C12.578.v2.A.ND2-1
Possible name(s)
NBN
Gene model
Location
KhC12 [4,396,549 / 4,402,946]
Amino acid sequence
Length: 784
>KH.C12.578.v2.A.ND2-1
SFNLSIQFTEKKMWSLVSTENNQVKRLLANRVYTFGRKDVDFIIANDSSVSRKHGTIKVI
DEESSNEPCLLVSDSSKFGTFYSKNETGNEQHLVFNKITGKVRLKHGDCLRIGVLKSIFK
IKHKPLLIVTSSMSSVLQEKLRDKVSKLGGKLTTSWQTGVTHLAMQSILLNVKVTQALAC
ACPIVSEKYFSKLLKSVETNEAELPSTNDFLPDISEQGLDKRECSFQVNVERKNIFRDKT
VVFLSHKQMKRLGSSCSYSGATVCLVSDQKCTDEKLIDENTIVVRCADNAESQVIDAKKL
EKLQRQFRRKQLRFIQEHEIGLSLLYCSTDIYCNPSFDLEQETTFSQRPIPGSTFSQNMD
HLQRVKSRQEVEDTDDPNSLFISCIPETMKSQAPDTFCSLDVGMESEIGRKKRPHEDHGT
DEITSKHQKPNSPPKHQPHTVSSKLIDDTAHFSKDPTHRKTPELPFKVPKPQENIAQSVE
NIAQSMLGSSMTSNKKKSKPPPKKKRISVVPTTPVQLTIPTNKPTIDHNPTETHIITSTK
VASNYDIALNPGPVSPIQQNVDDIPDSCIEDDSLWTSSMDLNQKNDVLVLPVKTEYIAPE
ISVDQDSERYVDPDLIDSERFTESQHCEPTVQIKPKQELLVVKKEKTSQPYPQVNKDKFK
NVTAGWADPKNAPTSDYCEVIPDYPTSDLSKLVQVSLIVTTSTTRVTSKSNAQRNTKNYK
CFRKVYPTYMDYESQNNTAASFKPPTIIGGRDLFKHENKISKDTNLEDWAMLNEKENDNL
NPFG
Nucleotide sequence
Length: 2,959
>KH2012:KH.C12.578.v2.A.ND2-1
TTTGTTTTGTATGAGCTGCATGTGTTTGGAGGATTTTTTAAATACGCATGCATTTATCTG
ATTAGTGATTACATCAATTCTAGTTAAAGGATACAGATGTCCGCGTTGTAATCTTTTAAC
TTAAGTATACAGTTCACCGAGAAGAAAATGTGGTCCCTGGTTTCAACAGAAAATAATCAA
GTAAAGAGGCTTCTTGCAAATCGAGTATACACGTTTGGAAGAAAGGATGTGGACTTCATA
ATTGCTAATGATTCGTCAGTGAGTAGAAAGCATGGGACAATAAAAGTGATCGATGAGGAA
TCAAGTAATGAACCATGTCTGCTTGTGAGTGACAGCTCAAAGTTTGGGACATTCTACTCA
AAAAATGAAACTGGAAATGAACAACATTTGGTTTTTAACAAAATAACGGGTAAAGTTCGA
CTCAAACATGGGGATTGTCTTCGAATTGGAGTTCTGAAGTCAATTTTCAAAATCAAACAC
AAACCACTGCTCATTGTTACATCATCAATGAGTTCTGTTCTGCAAGAAAAGTTGCGTGAC
AAAGTTTCAAAGCTTGGTGGTAAACTGACCACTAGCTGGCAAACTGGAGTTACACATCTA
GCCATGCAAAGCATTCTTCTTAATGTGAAGGTCACACAAGCGTTAGCATGTGCTTGTCCT
ATTGTCAGTGAAAAGTATTTTTCCAAACTTTTGAAATCAGTTGAAACTAATGAAGCTGAA
CTGCCAAGTACTAATGATTTTCTTCCCGATATATCTGAACAAGGTCTTGATAAACGTGAA
TGTTCGTTTCAAGTAAACGTGGAAAGAAAAAATATCTTTCGTGATAAAACAGTTGTTTTT
CTCAGCCATAAACAGATGAAGCGTCTTGGTTCTTCATGCTCGTACTCTGGTGCCACCGTG
TGTTTGGTATCTGATCAAAAATGCACGGATGAAAAATTAATTGACGAAAATACAATCGTT
GTACGATGTGCTGATAACGCGGAATCTCAAGTAATTGATGCAAAAAAACTTGAAAAGTTG
CAGAGACAGTTTCGTAGAAAACAGCTACGTTTCATACAAGAGCATGAGATAGGATTATCT
TTGTTGTATTGCTCCACTGATATTTATTGCAACCCTTCATTTGATCTTGAACAAGAAACC
ACTTTCTCCCAACGACCGATACCGGGTTCTACATTCTCTCAAAACATGGACCATCTCCAG
CGGGTGAAGTCCAGGCAAGAGGTGGAGGATACTGATGATCCAAACTCTCTCTTTATCTCC
TGCATCCCTGAAACAATGAAATCCCAAGCTCCGGACACGTTTTGTTCCCTGGATGTTGGA
ATGGAGTCCGAGATCGGAAGAAAGAAAAGACCGCATGAAGACCACGGTACTGATGAAATT
ACTTCAAAACATCAAAAACCAAACTCCCCACCAAAACACCAACCACACACTGTATCTTCC
AAGCTTATAGATGATACAGCTCACTTTAGTAAGGATCCAACACACAGAAAAACACCGGAG
TTACCCTTCAAGGTGCCAAAACCACAGGAAAATATTGCCCAATCTGTGGAGAATATTGCG
CAATCCATGCTAGGCAGCTCAATGACTTCAAACAAGAAAAAATCCAAACCTCCACCAAAG
AAAAAACGAATATCTGTCGTTCCAACGACACCAGTTCAACTTACAATTCCAACCAATAAG
CCAACTATAGACCATAACCCAACTGAAACACATATTATAACTTCCACTAAAGTTGCCTCA
AACTATGACATTGCGTTGAATCCAGGCCCTGTTTCACCAATACAACAAAATGTAGATGAT
ATTCCTGACAGTTGTATAGAAGATGATAGTCTATGGACTTCTTCAATGGATTTAAACCAG
AAAAATGATGTTCTTGTGCTCCCAGTGAAGACTGAGTACATAGCTCCTGAAATAAGTGTT
GACCAAGACAGTGAACGTTATGTAGACCCAGATTTAATAGACAGTGAGAGATTTACTGAA
TCGCAACACTGCGAACCAACTGTGCAGATTAAGCCAAAGCAGGAATTGCTTGTTGTTAAA
AAAGAGAAAACAAGCCAACCTTACCCACAAGTAAACAAGGACAAGTTTAAGAACGTAACA
GCAGGTTGGGCTGATCCTAAAAATGCACCTACAAGTGATTATTGTGAAGTAATTCCTGAT
TATCCAACTTCAGATTTAAGCAAACTTGTTCAAGTTTCATTAATTGTTACAACTTCTACA
ACACGTGTGACAAGTAAAAGTAATGCACAGAGAAATACGAAAAACTACAAATGTTTTCGG
AAGGTTTACCCAACATATATGGATTATGAGTCGCAGAATAACACGGCTGCTTCTTTCAAA
CCACCAACAATAATTGGTGGTCGAGATCTTTTTAAACATGAGAACAAAATATCCAAAGAC
ACAAATCTGGAGGACTGGGCAATGCTTAATGAAAAGGAAAATGACAACTTAAATCCATTC
GGGTAATAGCAATTGTACAAATTTGGATGGAACATCTGTTTGATGATAGCCTCGTTGAAA
TTATGTGTTGTTTATGCTCTATCTTCATAATACGTTTTCTTTTGTTTTATTAATCTTTTT
TGTATTTTCTTGCGTTTGGAAATTTCTAATTAGCCATATTTTAGCCACAAATGCTCCTAC
TGGCAAGCATGTTGGGCTGATTGATATAGCCTAACTCTTCTGGCAATTTATTATAAGAGT
TTCAACATCCTATTCAGTTGCTTTCAATGTACCACAACGAATGTGGCACACGATTTATGT
AATCGTAATTCAAAATTTCATTAATTGCACTTCTGATACATAACTGAAAATTATAAAAGT
TCGCCCTGAAATCGCTTCAGAATTTGATGTTACAAAACTAGTTAATCTCTTCCAATATTA
TGAGTTGTGGAAGGTCTGTCAACTCGGTATATGAACTCTGCTGGGGTGAAGTAACCAATG
TATTCGACCTCATCTGGTG
| CDD |
FHA_dom (IPR000253) - T[13-123] 4.44536E-8 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[14-128] 8.42E-11 |
| Pfam |
FHA_dom (IPR000253) - T[33-113] 1.9E-7 |
| ProSiteProfiles |
FHA_dom (IPR000253) - T[33-87] 7.86 |
| Gene3D |
BRCT_dom_sf (IPR036420) - T[123-226] 1.9E-10 |
| SUPERFAMILY |
BRCT_dom_sf (IPR036420) - T[127-195] 2.62E-7 |
| CDD |
BRCT_dom (IPR001357) - T[129-195] 1.2869E-5 |
| Pfam |
BRCT_dom (IPR001357) - T[130-194] 1.2E-7 |
| Pfam |
Nibrin_BRCT2 (IPR032429) - T[231-335] 4.6E-17 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NBN_HUMAN | 30.084 % | 163 | 6.49E-42 |