Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C9.419.v1....'
  2. Transcript 'Harore.CG.MTP2014.S2...'
  3. Transcript 'KH2012:KH.C4.184.v2....'
  4. Transcript 'KH2012:KH.C9.264.v1....'
  5. Transcript 'KH2012:KH.C12.578.v2...'

Transcript Model

Transcript Id

KH2012:KH.C12.578.v2.A.ND2-1

Possible name(s)

NBN

Location

KhC12 [4,396,549 / 4,402,946]

Sequences

Amino acid sequence

Length: 784

>KH.C12.578.v2.A.ND2-1
SFNLSIQFTEKKMWSLVSTENNQVKRLLANRVYTFGRKDVDFIIANDSSVSRKHGTIKVI
DEESSNEPCLLVSDSSKFGTFYSKNETGNEQHLVFNKITGKVRLKHGDCLRIGVLKSIFK
IKHKPLLIVTSSMSSVLQEKLRDKVSKLGGKLTTSWQTGVTHLAMQSILLNVKVTQALAC
ACPIVSEKYFSKLLKSVETNEAELPSTNDFLPDISEQGLDKRECSFQVNVERKNIFRDKT
VVFLSHKQMKRLGSSCSYSGATVCLVSDQKCTDEKLIDENTIVVRCADNAESQVIDAKKL
EKLQRQFRRKQLRFIQEHEIGLSLLYCSTDIYCNPSFDLEQETTFSQRPIPGSTFSQNMD
HLQRVKSRQEVEDTDDPNSLFISCIPETMKSQAPDTFCSLDVGMESEIGRKKRPHEDHGT
DEITSKHQKPNSPPKHQPHTVSSKLIDDTAHFSKDPTHRKTPELPFKVPKPQENIAQSVE
NIAQSMLGSSMTSNKKKSKPPPKKKRISVVPTTPVQLTIPTNKPTIDHNPTETHIITSTK
VASNYDIALNPGPVSPIQQNVDDIPDSCIEDDSLWTSSMDLNQKNDVLVLPVKTEYIAPE
ISVDQDSERYVDPDLIDSERFTESQHCEPTVQIKPKQELLVVKKEKTSQPYPQVNKDKFK
NVTAGWADPKNAPTSDYCEVIPDYPTSDLSKLVQVSLIVTTSTTRVTSKSNAQRNTKNYK
CFRKVYPTYMDYESQNNTAASFKPPTIIGGRDLFKHENKISKDTNLEDWAMLNEKENDNL
NPFG

Nucleotide sequence

Length: 2,959

>KH2012:KH.C12.578.v2.A.ND2-1
TTTGTTTTGTATGAGCTGCATGTGTTTGGAGGATTTTTTAAATACGCATGCATTTATCTG
ATTAGTGATTACATCAATTCTAGTTAAAGGATACAGATGTCCGCGTTGTAATCTTTTAAC
TTAAGTATACAGTTCACCGAGAAGAAAATGTGGTCCCTGGTTTCAACAGAAAATAATCAA
GTAAAGAGGCTTCTTGCAAATCGAGTATACACGTTTGGAAGAAAGGATGTGGACTTCATA
ATTGCTAATGATTCGTCAGTGAGTAGAAAGCATGGGACAATAAAAGTGATCGATGAGGAA
TCAAGTAATGAACCATGTCTGCTTGTGAGTGACAGCTCAAAGTTTGGGACATTCTACTCA
AAAAATGAAACTGGAAATGAACAACATTTGGTTTTTAACAAAATAACGGGTAAAGTTCGA
CTCAAACATGGGGATTGTCTTCGAATTGGAGTTCTGAAGTCAATTTTCAAAATCAAACAC
AAACCACTGCTCATTGTTACATCATCAATGAGTTCTGTTCTGCAAGAAAAGTTGCGTGAC
AAAGTTTCAAAGCTTGGTGGTAAACTGACCACTAGCTGGCAAACTGGAGTTACACATCTA
GCCATGCAAAGCATTCTTCTTAATGTGAAGGTCACACAAGCGTTAGCATGTGCTTGTCCT
ATTGTCAGTGAAAAGTATTTTTCCAAACTTTTGAAATCAGTTGAAACTAATGAAGCTGAA
CTGCCAAGTACTAATGATTTTCTTCCCGATATATCTGAACAAGGTCTTGATAAACGTGAA
TGTTCGTTTCAAGTAAACGTGGAAAGAAAAAATATCTTTCGTGATAAAACAGTTGTTTTT
CTCAGCCATAAACAGATGAAGCGTCTTGGTTCTTCATGCTCGTACTCTGGTGCCACCGTG
TGTTTGGTATCTGATCAAAAATGCACGGATGAAAAATTAATTGACGAAAATACAATCGTT
GTACGATGTGCTGATAACGCGGAATCTCAAGTAATTGATGCAAAAAAACTTGAAAAGTTG
CAGAGACAGTTTCGTAGAAAACAGCTACGTTTCATACAAGAGCATGAGATAGGATTATCT
TTGTTGTATTGCTCCACTGATATTTATTGCAACCCTTCATTTGATCTTGAACAAGAAACC
ACTTTCTCCCAACGACCGATACCGGGTTCTACATTCTCTCAAAACATGGACCATCTCCAG
CGGGTGAAGTCCAGGCAAGAGGTGGAGGATACTGATGATCCAAACTCTCTCTTTATCTCC
TGCATCCCTGAAACAATGAAATCCCAAGCTCCGGACACGTTTTGTTCCCTGGATGTTGGA
ATGGAGTCCGAGATCGGAAGAAAGAAAAGACCGCATGAAGACCACGGTACTGATGAAATT
ACTTCAAAACATCAAAAACCAAACTCCCCACCAAAACACCAACCACACACTGTATCTTCC
AAGCTTATAGATGATACAGCTCACTTTAGTAAGGATCCAACACACAGAAAAACACCGGAG
TTACCCTTCAAGGTGCCAAAACCACAGGAAAATATTGCCCAATCTGTGGAGAATATTGCG
CAATCCATGCTAGGCAGCTCAATGACTTCAAACAAGAAAAAATCCAAACCTCCACCAAAG
AAAAAACGAATATCTGTCGTTCCAACGACACCAGTTCAACTTACAATTCCAACCAATAAG
CCAACTATAGACCATAACCCAACTGAAACACATATTATAACTTCCACTAAAGTTGCCTCA
AACTATGACATTGCGTTGAATCCAGGCCCTGTTTCACCAATACAACAAAATGTAGATGAT
ATTCCTGACAGTTGTATAGAAGATGATAGTCTATGGACTTCTTCAATGGATTTAAACCAG
AAAAATGATGTTCTTGTGCTCCCAGTGAAGACTGAGTACATAGCTCCTGAAATAAGTGTT
GACCAAGACAGTGAACGTTATGTAGACCCAGATTTAATAGACAGTGAGAGATTTACTGAA
TCGCAACACTGCGAACCAACTGTGCAGATTAAGCCAAAGCAGGAATTGCTTGTTGTTAAA
AAAGAGAAAACAAGCCAACCTTACCCACAAGTAAACAAGGACAAGTTTAAGAACGTAACA
GCAGGTTGGGCTGATCCTAAAAATGCACCTACAAGTGATTATTGTGAAGTAATTCCTGAT
TATCCAACTTCAGATTTAAGCAAACTTGTTCAAGTTTCATTAATTGTTACAACTTCTACA
ACACGTGTGACAAGTAAAAGTAATGCACAGAGAAATACGAAAAACTACAAATGTTTTCGG
AAGGTTTACCCAACATATATGGATTATGAGTCGCAGAATAACACGGCTGCTTCTTTCAAA
CCACCAACAATAATTGGTGGTCGAGATCTTTTTAAACATGAGAACAAAATATCCAAAGAC
ACAAATCTGGAGGACTGGGCAATGCTTAATGAAAAGGAAAATGACAACTTAAATCCATTC
GGGTAATAGCAATTGTACAAATTTGGATGGAACATCTGTTTGATGATAGCCTCGTTGAAA
TTATGTGTTGTTTATGCTCTATCTTCATAATACGTTTTCTTTTGTTTTATTAATCTTTTT
TGTATTTTCTTGCGTTTGGAAATTTCTAATTAGCCATATTTTAGCCACAAATGCTCCTAC
TGGCAAGCATGTTGGGCTGATTGATATAGCCTAACTCTTCTGGCAATTTATTATAAGAGT
TTCAACATCCTATTCAGTTGCTTTCAATGTACCACAACGAATGTGGCACACGATTTATGT
AATCGTAATTCAAAATTTCATTAATTGCACTTCTGATACATAACTGAAAATTATAAAAGT
TCGCCCTGAAATCGCTTCAGAATTTGATGTTACAAAACTAGTTAATCTCTTCCAATATTA
TGAGTTGTGGAAGGTCTGTCAACTCGGTATATGAACTCTGCTGGGGTGAAGTAACCAATG
TATTCGACCTCATCTGGTG

InterProScan

CDD
FHA_dom (IPR000253) - T[13-123] 4.44536E-8
SUPERFAMILY
SMAD_FHA_dom_sf (IPR008984) - T[14-128] 8.42E-11
Pfam
FHA_dom (IPR000253) - T[33-113] 1.9E-7
ProSiteProfiles
FHA_dom (IPR000253) - T[33-87] 7.86
Gene3D
BRCT_dom_sf (IPR036420) - T[123-226] 1.9E-10
SUPERFAMILY
BRCT_dom_sf (IPR036420) - T[127-195] 2.62E-7
CDD
BRCT_dom (IPR001357) - T[129-195] 1.2869E-5
Pfam
BRCT_dom (IPR001357) - T[130-194] 1.2E-7
Pfam
Nibrin_BRCT2 (IPR032429) - T[231-335] 4.6E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NBN_HUMAN 30.084 % 163 6.49E-42