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  1. Transcript 'KH2012:KH.C1.26.v8.A...'

Transcript Model

Transcript Id

KH2012:KH.C1.26.v8.A.ND4-2

Possible name(s)

ATF1; CREB1; CREM

Gene model

KH2012:KH.C1.26

Location

KhC1 [7,314,987 / 7,318,894]

Sequences

Amino acid sequence

Length: 244

>KH.C1.26.v8.A.ND4-2
FDDLQSGSGETQMVTLPVSMAHAINSAQGQQTVISSQQSGQPVAQDTAKRRELLSRRPSY
RKILNELSGQPDANQRVKDEPGGSKSSESSESDSGGQMVTPLQAPTIAYQTGSGTVTVHQ
SPQTIQIPASALNHDQHVTSVAGLQTFSMANALAQGQAALVQDSNTSGNTLWMPGNHVVV
QGGDSQMYQIRTSTSSNAIPNVVLSGNSMQSPQQMAEEASRKRELRLMKNRFVTWLFIIL
AFLI

Nucleotide sequence

Length: 2,051

>KH2012:KH.C1.26.v8.A.ND4-2
TGTATATGTATGTAAGTTTAATTCAGTTAGTGCAGTTTAATGTTTTGATATCTTAATGGC
AACAAACTGCGAAGCTTTCTATTTAGCATAGCATAGAACTGCCAAGAACTCCATTAGTTG
GTAGTATTTTAAGAGTATAAATTAACAAGACATTATTAGTTATTGTAAGTGACATTGCGT
GAATGCACATTTTATAAACTTCATTATTAATGAAGCCATGTCAGATGTTCGATTTAATAT
GTCATGTTCGCAAATTTCGAATACCCATTATAATGAATTCGTAATTTGATGATTTGCAGT
CTGGTTCCGGCGAAACACAGATGGTGACTTTACCAGTGTCAATGGCACATGCAATCAACT
CAGCTCAAGGCCAACAAACAGTCATATCAAGTCAACAATCAGGCCAACCTGTTGCTCAGG
ATACTGCGAAGAGGCGAGAACTGCTGTCCAGAAGGCCTTCCTACAGGAAAATTTTAAACG
AGTTGTCAGGACAACCAGATGCAAACCAACGAGTCAAAGATGAACCAGGTGGAAGCAAAT
CTTCAGAAAGCTCCGAATCTGACTCCGGTGGTCAAATGGTAACTCCATTACAAGCACCAA
CCATAGCATACCAAACTGGGAGTGGAACAGTGACTGTCCACCAATCTCCACAAACAATTC
AAATACCGGCCTCTGCTTTAAACCATGATCAACATGTGACCTCCGTGGCTGGTCTTCAAA
CTTTCTCCATGGCCAACGCCCTCGCACAAGGCCAAGCTGCTTTAGTACAAGATTCCAATA
CCAGCGGAAACACCCTGTGGATGCCAGGGAATCATGTTGTGGTACAAGGAGGCGACTCCC
AGATGTACCAAATCCGTACCTCCACTTCATCAAATGCAATTCCTAATGTTGTGTTAAGTG
GTAACAGCATGCAATCACCTCAGCAGATGGCAGAAGAAGCTTCAAGGAAGCGGGAACTGA
GGTTAATGAAAAACAGGTTTGTAACTTGGCTTTTCATTATTTTAGCTTTCTTAATCTAGT
ACTTCATGTACCATTTTTGCCGGAAATGCATTATAATTTTATTTCATCCGAAAACTAGTC
AGACATAGAAGTTTGTTTACCTGTTAGTGCATATACAAAGTTTTTTTTCACCCTCCAAAA
CAATTTTTTTACCTTTAAAAGTTTTATATCCTGAAACATTTGCAATGGTAGCATGAGTTT
GGTCAGTTTTGTTTGCTTTCCGTTGTTTGTTCGCTTTTCTTGCGGAGCTGGCATCACAGA
ACCAGATTAACGGACGGTTAAATAACCATTATTAACCATGCATGCATCAATGTAACGGCA
TGATTGCTAATGTTATTTTACTTTTTGTTTTTCTGGTTCTGTCGCCGATGTCTCAACCCC
CTGTGCGCTGTCGGGATTTCACACGATACAGAGAAGCGGCCAAGGATTGCAGGTTAAAGA
AGAAAGAGTACATTAAGTGCTTAGAGAACCGTGTCCATGTGCTTGAAACACAAAACAAAG
CTCTTATAGATGAGTTGCAACAGTTAAAGGAGATGTACTGTAGAGATGAATTGCACTGAA
CAATTTTTAAGCAATCATCCTGACGTTGTTTTTCAATTTCTCACATTTGTTGCTTACATA
ACTGGTTTCATTATTTATTCAGTTGTACCTGGCCATATTGCTAAATATAACTGAGCTAAG
TATTAGCAACAGTGTTGGCAATTAGCGTGGATATTTAGCGTTCCTTTGTACAGTTTTTAA
GCAGTTTTTCACCAGCACAATATTCAACTGACTAAGCCATGACTAAATAAACTTAATACC
CTCTGACAACTCTGGTAACATGCAAAGAATGTGCATATTAACCTCAACCAACTGAGCACA
TACAGATTTATTCACACCTCCTGCAACTGCCTTGTTGCCTTACCAGCTCTGGAATAATAC
AACATTGCACATGAATGTGGCTGCATTTATTTTGCTTATTTAACCAGTTTTAAAAATTCA
TTTGCCTTGTCGTGTTATGTTATAGCTCATTTCTGCCTTTCATTCTGTTGTAAATAAACA
CTAGTAAAACC

InterProScan

PANTHER
CREB1 (IPR029802) - T[19-232] 4.0E-27
ProSiteProfiles
Coactivator_CBP_pKID (IPR003102) - T[27-86] 12.79
Pfam
Coactivator_CBP_pKID (IPR003102) - T[39-79] 1.3E-19
PRINTS
Leuzip_CREB (IPR001630) - T[44-66] 3.4E-19 - T[180-191] 3.4E-19 - T[217-233] 3.4E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ATF1_HUMAN 36.649 % 85.5 7.72E-20
CREM_HUMAN 40.952 % 103 3.92E-26
CREB1_HUMAN 43.455 % 115 1.96E-30