- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C1.267.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.267.v2.A.nonSL5-1
Possible name(s)
BPTF; ING3; TAF3
Gene model
Location
KhC1 [3,007,404 / 3,020,530]
Amino acid sequence
Length: 863
>KH.C1.267.v2.A.nonSL5-1
SYHTFCSYSCSRNMADVFSKGVLKIVVAQLTQAVGFDSLQLGTLEVLTDLLERFLLTTGR
TAHDLSEKCGRTNVMTGDIEHCFNLLHISPREIIDYVQQMDQVQFPSKVAKFPIPKSSNF
QFQSIHESSDSDIPSYFPSLKQSAAEEKPLNTSDQRSRSPLFTIAGKDASSDESAADGYA
SDGSSTHNAELRYLTNPEDIPVVSGTAASSSPSSLSTTDYHPFKREVAVTPPEIPNKLTE
NIRPKPHNTKQSLSKNDEPLWVKQHAARMEHQTPKSSKSFIKSTSTPVFPNRDSGKPIKH
ETPAPKVSPWDSPLFSNPKLLSSKSSDSFKKSTPKDKFRGDFSEKTSKPKKTSITSRIAE
VDKLLHDPLVVKEEPTPPSKVKLEKSPMSPHYNLLRAAELTKTPIEAPSSNNSALFASPK
SMDDAIDAVVHRASKEVEEAELMKFSHLVKDSSSSGEDFDVEVSHKTEELLQLEQRGFHH
HHDEESPVRPPLTPSPAPSNTSMIIDQDIDFNPGNKSTYRDKVPSLLVHTPEPQSERKHS
VSSHSSVVSHDFHDEPHDIYDSPHRKHSREIQSSHTSYSPPHHKKSKKDRKDKDYNKVKS
LKKSKHKDKEKKRSTSHEQHKLDLKSKSVEKLVLKKSKFIAPKVKPVVKEREVVSCSFQR
ERLPLPKLSAEIPAPLIINKDKKKEKKEKKKKKEKEIKLMKHTKEEVTPIPKLTFKMTTS
DKKVSIVKPSKHKRTPSLDEDESDFNDDLDDEDLYPPPPKKKAPEVKKEQKPVERKLITQ
TISVGHAVGVVLDDDGNRVWICPGCNKPDDGSPMIGCDKCDDWYHWPCVGIIQEPPENEE
WFCPNCRKAQKQKGKKKIKTKHR
Nucleotide sequence
Length: 2,862
>KH2012:KH.C1.267.v2.A.nonSL5-1
GATTTTTTTGGTTAACTATAGTACTACCACTACCATCATTCATATGGGACGAGAAAATAG
AACAAAAAGTTACCCTAGTCCTACCATACATTTTGCTCATATTCTTGCTCCAGAAACATG
GCGGACGTATTTAGCAAGGGCGTTTTAAAGATAGTGGTAGCTCAACTGACTCAGGCTGTT
GGATTCGATTCCTTACAACTTGGTACTTTAGAAGTATTGACAGATCTCTTGGAAAGGTTT
CTTCTCACAACTGGACGGACTGCTCATGACCTGAGTGAAAAATGTGGCAGAACCAATGTA
ATGACGGGCGACATCGAACACTGCTTCAACTTGCTTCATATTTCACCACGTGAGATAATT
GACTATGTTCAACAAATGGACCAAGTGCAATTCCCGTCAAAAGTTGCAAAATTTCCCATT
CCAAAGTCGTCCAATTTCCAGTTCCAGTCTATCCATGAATCGAGTGATTCAGATATACCA
AGTTATTTTCCCTCTTTAAAACAGTCAGCAGCAGAAGAAAAGCCACTAAACACATCAGAC
CAAAGGTCTCGGAGTCCTCTTTTTACAATTGCTGGTAAAGATGCTTCATCTGATGAAAGC
GCGGCAGATGGATATGCTTCCGATGGTTCATCCACTCATAATGCAGAATTGAGATACCTT
ACCAACCCTGAAGACATCCCTGTAGTGAGTGGAACAGCAGCTTCAAGTTCTCCATCTTCA
CTAAGCACAACAGACTATCATCCATTCAAACGTGAAGTTGCTGTCACGCCTCCAGAGATT
CCAAACAAACTTACAGAAAACATCCGGCCCAAGCCACACAACACCAAGCAGTCATTAAGT
AAAAATGACGAACCCCTTTGGGTTAAACAGCACGCAGCAAGGATGGAGCACCAGACTCCA
AAATCATCAAAAAGTTTCATCAAGTCCACCAGTACACCTGTGTTTCCGAACAGAGACAGT
GGAAAGCCAATAAAACATGAAACTCCTGCTCCAAAGGTGTCTCCCTGGGACTCGCCTCTA
TTTTCAAACCCAAAACTGCTTTCTTCCAAAAGTTCAGACTCGTTTAAAAAGAGCACGCCA
AAGGATAAATTTCGGGGCGATTTTTCGGAAAAAACTTCAAAGCCAAAAAAAACTTCTATT
ACATCAAGGATAGCTGAGGTGGATAAACTTTTACACGACCCCCTGGTTGTTAAAGAAGAA
CCTACACCGCCATCCAAGGTCAAACTAGAAAAGTCACCCATGAGCCCCCACTATAACCTG
CTACGAGCTGCTGAGTTGACTAAGACACCGATAGAAGCTCCGAGTTCAAATAATTCAGCT
TTATTTGCTTCTCCAAAATCCATGGATGATGCAATTGATGCTGTTGTACATCGAGCATCA
AAAGAAGTGGAAGAAGCAGAACTTATGAAGTTTTCGCATCTAGTGAAGGACTCGAGCAGT
TCTGGTGAGGATTTCGATGTGGAAGTTTCACATAAAACAGAGGAGTTGTTGCAGTTGGAA
CAGCGAGGTTTCCACCACCATCATGATGAAGAATCTCCCGTTCGTCCCCCCCTGACCCCC
TCACCTGCCCCATCTAATACCTCCATGATAATAGACCAAGATATTGACTTTAACCCTGGA
AATAAATCTACATACAGAGATAAAGTTCCATCATTGCTTGTCCACACACCAGAACCACAA
AGTGAACGAAAGCACAGTGTGTCTTCTCACAGCTCAGTGGTGTCACATGATTTTCACGAT
GAACCTCATGATATTTATGATTCCCCTCATAGGAAACATTCACGTGAAATACAAAGTTCT
CACACTAGCTACAGCCCTCCACATCATAAGAAATCTAAGAAAGACCGTAAAGACAAAGAT
TACAACAAAGTTAAATCTCTCAAGAAATCAAAGCATAAGGATAAAGAAAAGAAACGTTCA
ACATCACACGAACAACACAAACTCGATTTGAAGTCAAAGTCAGTTGAAAAACTTGTGCTC
AAAAAATCAAAGTTTATTGCACCTAAAGTAAAGCCTGTTGTGAAAGAGAGAGAGGTAGTT
TCATGTTCCTTTCAACGTGAGAGACTTCCACTGCCCAAGCTTTCTGCTGAAATACCTGCC
CCTCTCATTATTAACAAGGATAAAAAGAAGGAGAAAAAAGAGAAAAAGAAGAAAAAGGAA
AAAGAAATAAAACTAATGAAACATACAAAGGAAGAAGTCACCCCAATACCCAAGTTAACG
TTTAAAATGACAACCAGTGACAAGAAAGTGAGTATAGTGAAGCCATCTAAACATAAGAGG
ACACCATCCTTAGATGAAGACGAAAGTGACTTTAATGATGACTTGGATGATGAAGATCTG
TACCCTCCACCGCCAAAGAAAAAAGCTCCGGAAGTTAAAAAAGAGCAAAAACCAGTGGAA
AGAAAACTGATCACTCAAACCATCAGTGTTGGTCATGCAGTTGGTGTTGTACTTGATGAC
GATGGAAACAGGGTTTGGATTTGCCCTGGTTGCAATAAACCTGATGACGGTAGTCCTATG
ATAGGCTGTGATAAATGTGATGATTGGTATCATTGGCCGTGCGTTGGCATCATACAAGAA
CCGCCTGAAAATGAAGAATGGTTTTGTCCGAACTGCAGAAAAGCTCAAAAGCAGAAGGGA
AAGAAAAAGATTAAAACAAAACATAGATAAATCAAAATCGTGTTTTCTATGTTAAATATA
ATGATATAAATCAGTTCGGAGCAGTTTGTTTCACACACTGTCATATGCCTGACCATTCTA
TATGGTTAATGCTGCCAGATATAGTTTCGTTTTTCAAACGTTATCAGTATATTATGTGTT
TTATTAATCTGCTGTTTTTTGGAATAAACAGTTCACCAATCA
| Gene3D |
Histone-fold (IPR009072) - T[12-104] 5.6E-16 |
| PANTHER |
TAF3 (IPR037815) - T[14-377] 1.4E-153 - T[373-523] 1.4E-153 - T[528-685] 1.4E-153 - T[585-862] 1.4E-153 |
| SMART |
BTP (IPR006565) - T[16-92] 1.4E-12 |
| Pfam |
BTP (IPR006565) - T[17-85] 3.6E-12 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[758-850] 1.48E-18 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[787-856] 7.8E-23 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[799-849] 10.042 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[801-848] 7.4E-11 |
| SMART |
Znf_PHD (IPR001965) - T[801-847] 9.4E-14 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[802-846] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF3_HUMAN | 65.278 % | 129 | 1.68E-30 |