- Transcript 'Phmamm.CG.MTP2014.S6...' >
- Transcript 'KH2012:KH.C1.267.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.267.v2.A.nonSL7-1
Possible name(s)
BPTF; ING3; TAF3
Gene model
Location
KhC1 [3,007,404 / 3,020,527]
Amino acid sequence
Length: 863
>KH.C1.267.v2.A.nonSL7-1
SYHTFCSYSCSRNMADVFSKGVLKIVVAQLTQAVGFDSLQLGTLEVLTDLLERFLLTTGR
TAHDLSEKCGRTNVMTGDIEHCFNLLHISPREIIDYVQQMDQVQFPSKVAKFPIPKSSNF
QFQSIHESSDSDIPSYFPSLKQSAAEEKPLNTSDQRSRSPLFTIAGKDASSDESAADGYA
SDGSSTHNAELRYLTNPEDIPVVSGTAASSSPSSLSTTDYHPFKREVAVTPPEIPNKLTE
NIRPKPHNTKQSLSKNDEPLWVKQHAARMEHQTPKSSKSFIKSTSTPVFPNRDSGKPIKH
ETPAPKVSPWDSPLFSNPKLLSSKSSDSFKKSTPKDKFRGDFSEKTSKPKKTSITSRIAE
VDKLLHDPLVVKEEPTPPSKVKLEKSPMSPHYNLLRAAELTKTPIEAPSSNNSALFASPK
SMDDAIDAVVHRASKEVEEAELMKFSHLVKDSSSSGEDFDVEVSHKTEELLQLEQRGFHH
HHDEESPVRPPLTPSPAPSNTSMIIDQDIDFNPGNKSTYRDKVPSLLVHTPEPQSERKHS
VSSHSSVVSHDFHDEPHDIYDSPHRKHSREIQSSHTSYSPPHHKKSKKDRKDKDYNKVKS
LKKSKHKDKEKKRSTSHEQHKLDLKSKSVEKLVLKKSKFIAPKVKPVVKEREVVSCSFQR
ERLPLPKLSAEIPAPLIINKDKKKEKKEKKKKKEKEIKLMKHTKEEVTPIPKLTFKMTTS
DKKVSIVKPSKHKRTPSLDEDESDFNDDLDDEDLYPPPPKKKAPEVKKEQKPVERKLITQ
TISVGHAVGVVLDDDGNRVWICPGCNKPDDGSPMIGCDKCDDWYHWPCVGIIQEPPENEE
WFCPNCRKAQKQKGKKKIKTKHR
Nucleotide sequence
Length: 2,859
>KH2012:KH.C1.267.v2.A.nonSL7-1
TTTTTTGGTTAACTATAGTACTACCACTACCATCATTCATATGGGACGAGAAAATAGAAC
AAAAAGTTACCCTAGTCCTACCATACATTTTGCTCATATTCTTGCTCCAGAAACATGGCG
GACGTATTTAGCAAGGGCGTTTTAAAGATAGTGGTAGCTCAACTGACTCAGGCTGTTGGA
TTCGATTCCTTACAACTTGGTACTTTAGAAGTATTGACAGATCTCTTGGAAAGGTTTCTT
CTCACAACTGGACGGACTGCTCATGACCTGAGTGAAAAATGTGGCAGAACCAATGTAATG
ACGGGCGACATCGAACACTGCTTCAACTTGCTTCATATTTCACCACGTGAGATAATTGAC
TATGTTCAACAAATGGACCAAGTGCAATTCCCGTCAAAAGTTGCAAAATTTCCCATTCCA
AAGTCGTCCAATTTCCAGTTCCAGTCTATCCATGAATCGAGTGATTCAGATATACCAAGT
TATTTTCCCTCTTTAAAACAGTCAGCAGCAGAAGAAAAGCCACTAAACACATCAGACCAA
AGGTCTCGGAGTCCTCTTTTTACAATTGCTGGTAAAGATGCTTCATCTGATGAAAGCGCG
GCAGATGGATATGCTTCCGATGGTTCATCCACTCATAATGCAGAATTGAGATACCTTACC
AACCCTGAAGACATCCCTGTAGTGAGTGGAACAGCAGCTTCAAGTTCTCCATCTTCACTA
AGCACAACAGACTATCATCCATTCAAACGTGAAGTTGCTGTCACGCCTCCAGAGATTCCA
AACAAACTTACAGAAAACATCCGGCCCAAGCCACACAACACCAAGCAGTCATTAAGTAAA
AATGACGAACCCCTTTGGGTTAAACAGCACGCAGCAAGGATGGAGCACCAGACTCCAAAA
TCATCAAAAAGTTTCATCAAGTCCACCAGTACACCTGTGTTTCCGAACAGAGACAGTGGA
AAGCCAATAAAACATGAAACTCCTGCTCCAAAGGTGTCTCCCTGGGACTCGCCTCTATTT
TCAAACCCAAAACTGCTTTCTTCCAAAAGTTCAGACTCGTTTAAAAAGAGCACGCCAAAG
GATAAATTTCGGGGCGATTTTTCGGAAAAAACTTCAAAGCCAAAAAAAACTTCTATTACA
TCAAGGATAGCTGAGGTGGATAAACTTTTACACGACCCCCTGGTTGTTAAAGAAGAACCT
ACACCGCCATCCAAGGTCAAACTAGAAAAGTCACCCATGAGCCCCCACTATAACCTGCTA
CGAGCTGCTGAGTTGACTAAGACACCGATAGAAGCTCCGAGTTCAAATAATTCAGCTTTA
TTTGCTTCTCCAAAATCCATGGATGATGCAATTGATGCTGTTGTACATCGAGCATCAAAA
GAAGTGGAAGAAGCAGAACTTATGAAGTTTTCGCATCTAGTGAAGGACTCGAGCAGTTCT
GGTGAGGATTTCGATGTGGAAGTTTCACATAAAACAGAGGAGTTGTTGCAGTTGGAACAG
CGAGGTTTCCACCACCATCATGATGAAGAATCTCCCGTTCGTCCCCCCCTGACCCCCTCA
CCTGCCCCATCTAATACCTCCATGATAATAGACCAAGATATTGACTTTAACCCTGGAAAT
AAATCTACATACAGAGATAAAGTTCCATCATTGCTTGTCCACACACCAGAACCACAAAGT
GAACGAAAGCACAGTGTGTCTTCTCACAGCTCAGTGGTGTCACATGATTTTCACGATGAA
CCTCATGATATTTATGATTCCCCTCATAGGAAACATTCACGTGAAATACAAAGTTCTCAC
ACTAGCTACAGCCCTCCACATCATAAGAAATCTAAGAAAGACCGTAAAGACAAAGATTAC
AACAAAGTTAAATCTCTCAAGAAATCAAAGCATAAGGATAAAGAAAAGAAACGTTCAACA
TCACACGAACAACACAAACTCGATTTGAAGTCAAAGTCAGTTGAAAAACTTGTGCTCAAA
AAATCAAAGTTTATTGCACCTAAAGTAAAGCCTGTTGTGAAAGAGAGAGAGGTAGTTTCA
TGTTCCTTTCAACGTGAGAGACTTCCACTGCCCAAGCTTTCTGCTGAAATACCTGCCCCT
CTCATTATTAACAAGGATAAAAAGAAGGAGAAAAAAGAGAAAAAGAAGAAAAAGGAAAAA
GAAATAAAACTAATGAAACATACAAAGGAAGAAGTCACCCCAATACCCAAGTTAACGTTT
AAAATGACAACCAGTGACAAGAAAGTGAGTATAGTGAAGCCATCTAAACATAAGAGGACA
CCATCCTTAGATGAAGACGAAAGTGACTTTAATGATGACTTGGATGATGAAGATCTGTAC
CCTCCACCGCCAAAGAAAAAAGCTCCGGAAGTTAAAAAAGAGCAAAAACCAGTGGAAAGA
AAACTGATCACTCAAACCATCAGTGTTGGTCATGCAGTTGGTGTTGTACTTGATGACGAT
GGAAACAGGGTTTGGATTTGCCCTGGTTGCAATAAACCTGATGACGGTAGTCCTATGATA
GGCTGTGATAAATGTGATGATTGGTATCATTGGCCGTGCGTTGGCATCATACAAGAACCG
CCTGAAAATGAAGAATGGTTTTGTCCGAACTGCAGAAAAGCTCAAAAGCAGAAGGGAAAG
AAAAAGATTAAAACAAAACATAGATAAATCAAAATCGTGTTTTCTATGTTAAATATAATG
ATATAAATCAGTTCGGAGCAGTTTGTTTCACACACTGTCATATGCCTGACCATTCTATAT
GGTTAATGCTGCCAGATATAGTTTCGTTTTTCAAACGTTATCAGTATATTATGTGTTTTA
TTAATCTGCTGTTTTTTGGAATAAACAGTTCACCAATCA
| Gene3D |
Histone-fold (IPR009072) - T[12-104] 5.6E-16 |
| PANTHER |
TAF3 (IPR037815) - T[14-377] 1.4E-153 - T[373-523] 1.4E-153 - T[528-685] 1.4E-153 - T[585-862] 1.4E-153 |
| SMART |
BTP (IPR006565) - T[16-92] 1.4E-12 |
| Pfam |
BTP (IPR006565) - T[17-85] 3.6E-12 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[758-850] 1.48E-18 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[787-856] 7.8E-23 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[799-849] 10.042 |
| Pfam |
Znf_PHD-finger (IPR019787) - T[801-848] 7.4E-11 |
| SMART |
Znf_PHD (IPR001965) - T[801-847] 9.4E-14 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[802-846] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TAF3_HUMAN | 65.278 % | 129 | 1.68E-30 |