- Transcript 'KH2012:KH.S522.3.v1....' >
- Transcript 'KH2012:KH.C3.17.v2.R...' >
- Transcript 'KH2012:KH.C2.249.v1....' >
- Transcript 'KH2012:KH.C1.84.v1.A...' >
- Transcript 'KH2012:KH.C12.670.v1...'
Transcript Model
Transcript Id
KH2012:KH.C12.670.v1.A.nonSL2-1
Possible name(s)
CSMD1; CSMD2; MASP1
Gene model
Location
KhC12 [3,770,754 / 3,776,049]
Amino acid sequence
Length: 683
>KH.C12.670.v1.A.nonSL2-1
PGYTWLSECMALWWPCRSAVFQVFALLWLCSVQQALGDVCEPSNGTLLFDRYTSKLIPPE
RRFMLFASDTLGVNSKSVETLDFDHAKCIEAGNETVVIRPCNSSIVSQKWYQLHNQLVSI
PIGKCIASEPNNFDTDLQLKNCRTGQPSQEWSCLHHNSTEVLLSSAGRFLAVSSGTVHTV
DTKPANWRWKIADNSGKVLEKNPAAKRLCLTAASACPFPKQGVRSYFVTSDTALAKVMHP
PKELVLKHLGDTIRMCYAVGNNILAVCPLGFVALGSQTKQHQEKTCLAGGVWSEQQPLHC
VRRSCGRPDEGHHSTFIAGAIFMATLFTTHVMRNTSQTDHHEYADRTEDGQVLLFTANFY
LTGNSGTVTSPNYPQPYPASKNCEWKIEVEQGLRVVIWFRDFFIEPGSPFTGDCRHDVFY
INVGNKIKQFCGSLYPESWIAASNKVKLVFCSDVSGNSKGFKIDYTSWNSSKCYKPLCPN
FSMSANPVAPVRNGTFPDEEDNSHVYIGTEYANYFIEIVYGVLVISAIFLIAMLIVSHFF
NDIRTRIHPVSPTSSEEDFYDETERHRRLAQRRMTTMFDPVTIAPKITSDGVFVTQQWMA
DIDSMSSHSQGSVILSEPCLDRQHLPNVVPETQSNPLPVKIQISDADNKDLSEIKENRQV
SKPPEKGKKTAGAGGVRFSINGN
Nucleotide sequence
Length: 2,310
>KH2012:KH.C12.670.v1.A.nonSL2-1
AACCTGGGTATACATGGCTATCAGAATGCATGGCGTTGTGGTGGCCATGTCGTTCAGCTG
TTTTTCAAGTTTTTGCCCTGCTGTGGTTGTGTAGCGTACAGCAAGCGCTAGGCGACGTGT
GCGAGCCAAGTAACGGAACCCTTCTCTTCGACCGGTATACGAGTAAACTCATTCCGCCCG
AAAGAAGGTTTATGCTTTTTGCGTCCGACACCTTAGGAGTAAATTCCAAATCTGTCGAGA
CTTTAGATTTTGACCATGCTAAGTGTATTGAAGCAGGAAATGAAACAGTAGTAATACGTC
CTTGCAACAGCAGCATCGTATCGCAAAAGTGGTACCAGCTTCATAACCAACTTGTCAGTA
TACCTATCGGCAAATGTATTGCAAGCGAACCGAACAATTTCGATACCGATCTTCAGTTGA
AGAATTGTAGAACGGGCCAACCAAGTCAAGAATGGTCGTGTTTGCATCATAACAGCACAG
AAGTATTGTTGTCAAGCGCTGGACGTTTCCTGGCTGTCAGCTCTGGTACTGTACATACTG
TGGACACGAAACCAGCAAACTGGCGATGGAAAATTGCGGACAATTCTGGAAAAGTACTTG
AGAAAAATCCGGCCGCTAAAAGGTTATGTCTTACTGCAGCATCGGCATGTCCTTTTCCAA
AGCAAGGTGTTCGATCTTATTTCGTAACATCTGATACTGCACTAGCAAAGGTCATGCACC
CGCCAAAGGAATTGGTTCTAAAACACTTGGGCGACACCATCAGGATGTGTTATGCTGTTG
GAAACAACATTCTTGCTGTATGCCCATTGGGTTTCGTTGCTCTTGGTTCCCAAACCAAAC
AACACCAAGAGAAAACTTGCTTGGCTGGGGGTGTATGGTCAGAACAACAACCTTTACATT
GTGTTAGGCGGAGCTGTGGGCGACCAGATGAAGGCCATCATTCAACGTTTATCGCAGGGG
CTATCTTTATGGCGACGTTGTTCACTACACATGTGATGCGGAATACATCCCAGACCGATC
ATCACGAATATGCGGACCGGACGGAAGATGGTCAGGTTTTGCTCTTTACTGCAAACTTTT
ATTTGACTGGTAACTCTGGAACCGTGACGTCACCAAATTACCCTCAACCGTATCCGGCTT
CAAAGAACTGCGAGTGGAAAATAGAAGTAGAACAAGGTCTTCGAGTCGTCATCTGGTTTC
GAGACTTCTTCATTGAACCTGGATCTCCCTTTACTGGAGATTGTCGGCACGATGTGTTTT
ATATAAATGTAGGTAACAAAATCAAACAATTTTGTGGTTCTTTGTATCCCGAATCATGGA
TTGCTGCGAGTAATAAAGTGAAGTTGGTATTCTGTTCAGATGTTTCGGGCAATAGTAAAG
GTTTCAAGATCGACTACACTTCTTGGAATAGTAGTAAGTGCTACAAACCACTTTGCCCCA
ACTTTAGCATGTCCGCCAATCCGGTTGCACCAGTTCGAAACGGGACTTTCCCAGACGAAG
AGGACAACTCGCATGTCTACATAGGCACTGAATACGCAAACTACTTTATTGAGATTGTTT
ATGGGGTACTCGTGATATCAGCCATCTTCCTTATCGCGATGCTCATTGTGTCGCATTTCT
TTAACGACATCCGGACACGAATACATCCGGTATCCCCCACTTCCTCAGAAGAGGACTTTT
ACGATGAAACGGAACGTCATCGCCGTCTCGCTCAGCGGAGGATGACAACTATGTTTGATC
CCGTCACAATTGCTCCGAAAATTACGTCGGACGGTGTCTTCGTTACACAGCAATGGATGG
CAGATATTGATTCTATGAGCTCACACTCGCAGGGTTCTGTTATACTCAGTGAACCATGTC
TGGATAGACAACATTTACCCAACGTTGTGCCTGAAACCCAATCTAATCCTCTTCCTGTCA
AGATTCAAATAAGCGACGCCGATAACAAAGATTTATCAGAAATTAAAGAAAATCGCCAAG
TATCCAAGCCACCTGAAAAGGGAAAAAAGACCGCCGGTGCTGGGGGTGTACGCTTTAGCA
TCAACGGGAATTAAATCTCCCGCCCGGGTCTTCGGGGCATTCTTTGCCGCAAAACCCAAC
GGCAACTTCGGCGGGTGTGACTCCTGCGACTCCTACATATAAATCAAGTATTTCTAAACG
CTGAATAAACCATGGCAGGTGCAAACCTCGACGAGAAAGCTTGATGAAGTAGCACGTCGC
TTAAATACGAACAAAGAGGCTTTTGCGTATCCTTCATGATCGTACGATAATTGTTCTACC
TGGGTGTCCAATAAACACATGCGTTTGAAA
| ProSiteProfiles |
Ricin_B_lectin (IPR000772) - T[74-192] 13.375 |
| SUPERFAMILY |
Ricin_B-like_lectins (IPR035992) - T[83-195] 1.45E-10 |
| CDD |
Ricin_B_lectin (IPR000772) - T[87-176] 1.31753E-5 |
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[254-308] 4.89E-5 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[357-468] 21.768 |
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[357-467] 2.6E-26 |
| SMART |
CUB_dom (IPR000859) - T[357-468] 1.5E-22 |
| CDD |
CUB_dom (IPR000859) - T[360-467] 3.23933E-26 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[361-468] 1.57E-26 |
| Pfam |
CUB_dom (IPR000859) - T[361-465] 1.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|