- Transcript 'KH2012:KH.C1.279.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.279.v1.A.SL2-1
Possible name(s)
FBLN1; FBLN2; HMCN1
Gene model
Location
KhC1 [6,053,226 / 6,064,599]
Amino acid sequence
Length: 717
>KH.C1.279.v1.A.SL2-1
SYVRLYVLTDQVKSVKMFINFVRVLLLLTFSCLVHCQLPESFENVLTACCYQGKQFALSH
DSCHGIPVTVTSYTQICAVAQEKCCLEAEEQETCNRGVATARSMAVCDAPTSIRGQCEQD
GFKSCCDCCALGLKAYGLSLSCSMEILGEPCNSAYSECCRTGPLTTQPGDTTETSTSTAK
SARLNTTPATEFTGPRCATSNVCDHTCTDTSTGIQCSCREGYALEDDSVTCSDINECVLA
THSCVEGQICFNTLGSFTCQRLISCGTGYELTDRNTCDDIDECQLNIDNCGDKLNCINIR
GSFRCVAKSCDAGYFTDAVGGCIDIDECRSGDYICPSGTHCRNTHGSYVCDCPDGYVLSS
DQQSCEDIDECILGAHECADGETCVNTEGSFNCIQRPSLTCTAGYEISDDGESCIDVNEC
DRGTHTCSSGSTCINEEGSFRCQDPIICTPGTRPSSNQRSCIDIDECEDPLIHQCGEGAR
CVNVPGSFRCECNRGYRTTFQGSRTRCQDINECALAAGERCMYRCRNSPGSYSCVCPSGY
NLERFDGTCTDIDECNTNQHNCSRSETCFNTRGGFKCVEITCPAHYARLSNRKRCVRQSC
KAATNKRSCIRLPKQISHHNISVRNNAAPGTTLFRMSLAKGYPKDRYYFMLTKGNEDMLF
RASKRRFKKRKSGIVYATRKLTGPKDYVVDLTLKLYRKRRWATFISRLYIFVSEFHF
Nucleotide sequence
Length: 2,933
>KH2012:KH.C1.279.v1.A.SL2-1
TCTTATGTTAGATTATATGTGCTTACTGATCAAGTTAAAAGTGTGAAAATGTTTATAAAC
TTCGTGCGGGTACTTTTATTGCTGACTTTCTCGTGTCTCGTGCACTGTCAACTCCCAGAA
AGCTTCGAAAATGTTCTTACCGCCTGCTGTTACCAAGGAAAGCAGTTTGCGCTAAGTCAT
GACAGCTGTCATGGCATTCCAGTGACCGTAACTTCCTACACCCAAATCTGCGCTGTGGCT
CAGGAGAAATGCTGCCTTGAGGCGGAAGAACAAGAAACCTGCAACCGCGGAGTTGCGACC
GCTCGGAGCATGGCAGTATGTGACGCCCCTACATCAATCCGCGGTCAATGCGAACAAGAC
GGTTTCAAATCCTGCTGCGATTGCTGTGCTCTTGGGTTGAAGGCTTATGGTTTATCCCTC
AGCTGCAGCATGGAGATCCTTGGCGAACCGTGCAACAGTGCTTACTCGGAATGCTGCAGG
ACAGGCCCCCTTACCACCCAACCAGGAGATACAACTGAGACGTCAACTTCAACTGCGAAG
TCTGCGCGTCTCAACACGACTCCGGCTACAGAGTTCACGGGACCGCGATGCGCCACCAGC
AACGTATGCGACCACACTTGCACTGATACCAGCACTGGCATCCAGTGTTCCTGTAGGGAA
GGCTACGCCCTTGAAGACGATAGTGTGACTTGCTCAGATATCAACGAATGCGTGCTAGCG
ACCCACTCCTGTGTTGAAGGCCAGATTTGCTTCAACACGCTCGGTAGCTTTACCTGTCAG
CGACTCATAAGCTGTGGTACTGGATACGAGCTCACCGACCGCAACACGTGCGACGATATT
GACGAATGCCAGCTAAACATCGATAATTGCGGGGACAAGCTCAACTGCATCAACATACGA
GGCTCATTCCGATGTGTAGCCAAGTCTTGCGACGCTGGCTATTTCACCGACGCGGTCGGT
GGTTGCATAGATATTGATGAATGTCGATCCGGAGACTATATTTGCCCCTCTGGGACGCAC
TGTCGGAATACACACGGGTCGTACGTATGCGATTGCCCCGATGGTTATGTACTAAGTTCA
GATCAACAGTCTTGTGAAGACATCGACGAATGTATCTTGGGAGCTCACGAATGCGCTGAC
GGTGAGACATGCGTCAATACAGAGGGAAGCTTTAATTGCATCCAACGTCCATCATTGACT
TGCACGGCTGGTTATGAGATTAGTGACGACGGCGAGTCGTGCATAGATGTCAACGAGTGC
GACCGCGGTACACATACTTGTTCCAGCGGTTCAACTTGCATCAACGAGGAAGGCAGCTTC
AGATGCCAAGATCCAATTATATGCACACCTGGAACTCGCCCGAGCAGCAATCAACGCTCG
TGTATTGATATCGATGAATGCGAGGACCCTTTGATTCATCAGTGTGGCGAGGGCGCTCGG
TGTGTCAATGTACCTGGATCGTTCAGATGCGAGTGCAACCGTGGCTACAGGACAACCTTC
CAGGGTAGTCGCACCAGATGTCAAGATATTAACGAATGCGCACTTGCGGCCGGAGAGAGA
TGCATGTACAGGTGCCGCAATTCACCAGGAAGCTATTCGTGTGTTTGCCCGAGTGGTTAT
AATTTGGAACGATTCGACGGAACTTGCACAGATATTGATGAGTGTAATACTAATCAACAC
AACTGCAGTCGCTCAGAGACTTGCTTTAACACAAGAGGAGGCTTCAAGTGTGTTGAAATC
ACCTGCCCTGCGCATTACGCCAGACTTTCGAACCGAAAAAGATGCGTTCGTCAATCCTGC
AAAGCGGCAACCAACAAGCGGTCGTGCATACGACTGCCGAAGCAGATTTCACACCACAAC
ATCTCAGTGAGGAACAACGCTGCTCCCGGAACAACTTTGTTCAGAATGAGTTTAGCAAAA
GGTTACCCGAAAGATCGATACTACTTCATGCTTACCAAGGGTAACGAGGATATGCTCTTC
CGCGCATCTAAGCGTCGTTTTAAGAAGAGAAAGAGTGGAATAGTTTATGCTACGAGGAAA
CTCACAGGACCGAAAGATTACGTGGTCGACCTCACATTGAAGTTGTACCGAAAGCGAAGA
TGGGCCACCTTTATTTCTCGTTTATATATTTTTGTTTCGGAATTTCACTTCTAGTTTTCT
CTACTTGACAGTCGGGCTGAATCAGTCGTTGTGTGGCACCTAGAGACAAAAAGAAGCTCC
TACGCATCTGTATAGGAGGGCGCGAAGAGTCCAGATTAGGATTATGTACATAGCTGAATC
GGCAAATGTAAATTACAAGTTTTCAAGCGCATCAGGGATTTCAAAATTACAGCATAACCG
CTCTCACAGCACGCCAAACCTGATTTCAATTTCAGTGTTTTATCGTTTAGAGATAACTAT
TTTTTCGTCTTTAATGCAGTATTAGTCTGTCACAGCATAGATAGTAACACACATAAGCAT
TCGATGAGAAATTATCGGTTGCTGTTAACAAAGAAACTAAACTACAAAACAACACTGGTG
GAAAATTATGTTCCCTTTTATTAATTGCCCCCTGTTTAAGATCTAATAACAATTTCTTAC
CCTATTATATTCCTTTGCGCATATTTTCCCATATAATGTGTGGGTTAAATACGTTTAAGT
TCACTAATTCATTAACCATAGTCTTATCATCTCATTTTTTGCACATCGGCGTACCAAGCT
GAGCGGACAATGCCGCTTAAGCCATATATGGTGAAGCAAATGGGTAAAGTTTCCCGAATG
TTCTTACTGGTTCCTGCTTTTAGATTATTTATTTTTTGCATCCTCGTTGTTTTGCCGATG
TTCCACGTTGTTTTAAGCTGCCTTGTACAATGTACACTTTGCATGTCACTCGCCTACAAT
GCCAATATGCTCCTACAGGCACACAGGCATCCAAATAAACCGACGAAAAAGTG
| SMART |
Anaphylatoxin/fibulin (IPR000020) - T[49-85] 0.049 - T[128-159] 1.5 |
| ProSiteProfiles |
Anaphylatoxin/fibulin (IPR000020) - T[128-159] 7.878 |
| ProSitePatterns |
Anaphylatoxin/fibulin (IPR000020) - T[128-159] . |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[193-232] 6.652 - T[324-366] 12.779 - T[463-508] 13.541 - T[509-546] 10.804 |
| SMART |
EGF-like_dom (IPR000742) - T[196-232] 0.002 - T[236-278] 9.4 - T[282-323] 57.0 - T[327-366] 2.7E-4 - T[370-415] 200.0 - T[419-462] 18.0 - T[466-508] 8.1E-4 - T[512-550] 0.0047 - T[554-596] 23.0 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[197-232] 0.92 - T[233-278] 1.3E-6 - T[279-323] 7.7E-5 - T[324-366] 1.1E-10 - T[367-415] 8.0E-5 - T[416-462] 1.3E-7 - T[463-508] 4.6E-12 - T[509-550] 2.4E-9 - T[551-596] 3.8E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[216-231] . - T[350-365] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[233-277] 4.2E-10 - T[279-316] 5.4E-8 - T[324-365] 2.7E-11 - T[367-414] 9.6E-12 - T[416-461] 6.8E-10 - T[463-507] 5.6E-10 - T[509-549] 6.7E-7 - T[551-595] 2.4E-10 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[324-350] . - T[551-577] . |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[341-352] . - T[481-492] . - T[525-536] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[447-600] 2.28E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBLN1_HUMAN | 37.946 % | 374 | 9.92E-120 |
| HMCN1_HUMAN | 31.317 % | 219 | 9.41E-60 |
| FBLN2_HUMAN | 31.258 % | 342 | 1.5E-103 |