- Transcript 'KH2012:KH.C1.279.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.279.v1.A.SL3-1
Possible name(s)
FBLN1; FBLN2; HMCN1
Gene model
Location
KhC1 [6,053,226 / 6,064,588]
Amino acid sequence
Length: 713
>KH.C1.279.v1.A.SL3-1
LYVLTDQVKSVKMFINFVRVLLLLTFSCLVHCQLPESFENVLTACCYQGKQFALSHDSCH
GIPVTVTSYTQICAVAQEKCCLEAEEQETCNRGVATARSMAVCDAPTSIRGQCEQDGFKS
CCDCCALGLKAYGLSLSCSMEILGEPCNSAYSECCRTGPLTTQPGDTTETSTSTAKSARL
NTTPATEFTGPRCATSNVCDHTCTDTSTGIQCSCREGYALEDDSVTCSDINECVLATHSC
VEGQICFNTLGSFTCQRLISCGTGYELTDRNTCDDIDECQLNIDNCGDKLNCINIRGSFR
CVAKSCDAGYFTDAVGGCIDIDECRSGDYICPSGTHCRNTHGSYVCDCPDGYVLSSDQQS
CEDIDECILGAHECADGETCVNTEGSFNCIQRPSLTCTAGYEISDDGESCIDVNECDRGT
HTCSSGSTCINEEGSFRCQDPIICTPGTRPSSNQRSCIDIDECEDPLIHQCGEGARCVNV
PGSFRCECNRGYRTTFQGSRTRCQDINECALAAGERCMYRCRNSPGSYSCVCPSGYNLER
FDGTCTDIDECNTNQHNCSRSETCFNTRGGFKCVEITCPAHYARLSNRKRCVRQSCKAAT
NKRSCIRLPKQISHHNISVRNNAAPGTTLFRMSLAKGYPKDRYYFMLTKGNEDMLFRASK
RRFKKRKSGIVYATRKLTGPKDYVVDLTLKLYRKRRWATFISRLYIFVSEFHF
Nucleotide sequence
Length: 2,922
>KH2012:KH.C1.279.v1.A.SL3-1
ATTATATGTGCTTACTGATCAAGTTAAAAGTGTGAAAATGTTTATAAACTTCGTGCGGGT
ACTTTTATTGCTGACTTTCTCGTGTCTCGTGCACTGTCAACTCCCAGAAAGCTTCGAAAA
TGTTCTTACCGCCTGCTGTTACCAAGGAAAGCAGTTTGCGCTAAGTCATGACAGCTGTCA
TGGCATTCCAGTGACCGTAACTTCCTACACCCAAATCTGCGCTGTGGCTCAGGAGAAATG
CTGCCTTGAGGCGGAAGAACAAGAAACCTGCAACCGCGGAGTTGCGACCGCTCGGAGCAT
GGCAGTATGTGACGCCCCTACATCAATCCGCGGTCAATGCGAACAAGACGGTTTCAAATC
CTGCTGCGATTGCTGTGCTCTTGGGTTGAAGGCTTATGGTTTATCCCTCAGCTGCAGCAT
GGAGATCCTTGGCGAACCGTGCAACAGTGCTTACTCGGAATGCTGCAGGACAGGCCCCCT
TACCACCCAACCAGGAGATACAACTGAGACGTCAACTTCAACTGCGAAGTCTGCGCGTCT
CAACACGACTCCGGCTACAGAGTTCACGGGACCGCGATGCGCCACCAGCAACGTATGCGA
CCACACTTGCACTGATACCAGCACTGGCATCCAGTGTTCCTGTAGGGAAGGCTACGCCCT
TGAAGACGATAGTGTGACTTGCTCAGATATCAACGAATGCGTGCTAGCGACCCACTCCTG
TGTTGAAGGCCAGATTTGCTTCAACACGCTCGGTAGCTTTACCTGTCAGCGACTCATAAG
CTGTGGTACTGGATACGAGCTCACCGACCGCAACACGTGCGACGATATTGACGAATGCCA
GCTAAACATCGATAATTGCGGGGACAAGCTCAACTGCATCAACATACGAGGCTCATTCCG
ATGTGTAGCCAAGTCTTGCGACGCTGGCTATTTCACCGACGCGGTCGGTGGTTGCATAGA
TATTGATGAATGTCGATCCGGAGACTATATTTGCCCCTCTGGGACGCACTGTCGGAATAC
ACACGGGTCGTACGTATGCGATTGCCCCGATGGTTATGTACTAAGTTCAGATCAACAGTC
TTGTGAAGACATCGACGAATGTATCTTGGGAGCTCACGAATGCGCTGACGGTGAGACATG
CGTCAATACAGAGGGAAGCTTTAATTGCATCCAACGTCCATCATTGACTTGCACGGCTGG
TTATGAGATTAGTGACGACGGCGAGTCGTGCATAGATGTCAACGAGTGCGACCGCGGTAC
ACATACTTGTTCCAGCGGTTCAACTTGCATCAACGAGGAAGGCAGCTTCAGATGCCAAGA
TCCAATTATATGCACACCTGGAACTCGCCCGAGCAGCAATCAACGCTCGTGTATTGATAT
CGATGAATGCGAGGACCCTTTGATTCATCAGTGTGGCGAGGGCGCTCGGTGTGTCAATGT
ACCTGGATCGTTCAGATGCGAGTGCAACCGTGGCTACAGGACAACCTTCCAGGGTAGTCG
CACCAGATGTCAAGATATTAACGAATGCGCACTTGCGGCCGGAGAGAGATGCATGTACAG
GTGCCGCAATTCACCAGGAAGCTATTCGTGTGTTTGCCCGAGTGGTTATAATTTGGAACG
ATTCGACGGAACTTGCACAGATATTGATGAGTGTAATACTAATCAACACAACTGCAGTCG
CTCAGAGACTTGCTTTAACACAAGAGGAGGCTTCAAGTGTGTTGAAATCACCTGCCCTGC
GCATTACGCCAGACTTTCGAACCGAAAAAGATGCGTTCGTCAATCCTGCAAAGCGGCAAC
CAACAAGCGGTCGTGCATACGACTGCCGAAGCAGATTTCACACCACAACATCTCAGTGAG
GAACAACGCTGCTCCCGGAACAACTTTGTTCAGAATGAGTTTAGCAAAAGGTTACCCGAA
AGATCGATACTACTTCATGCTTACCAAGGGTAACGAGGATATGCTCTTCCGCGCATCTAA
GCGTCGTTTTAAGAAGAGAAAGAGTGGAATAGTTTATGCTACGAGGAAACTCACAGGACC
GAAAGATTACGTGGTCGACCTCACATTGAAGTTGTACCGAAAGCGAAGATGGGCCACCTT
TATTTCTCGTTTATATATTTTTGTTTCGGAATTTCACTTCTAGTTTTCTCTACTTGACAG
TCGGGCTGAATCAGTCGTTGTGTGGCACCTAGAGACAAAAAGAAGCTCCTACGCATCTGT
ATAGGAGGGCGCGAAGAGTCCAGATTAGGATTATGTACATAGCTGAATCGGCAAATGTAA
ATTACAAGTTTTCAAGCGCATCAGGGATTTCAAAATTACAGCATAACCGCTCTCACAGCA
CGCCAAACCTGATTTCAATTTCAGTGTTTTATCGTTTAGAGATAACTATTTTTTCGTCTT
TAATGCAGTATTAGTCTGTCACAGCATAGATAGTAACACACATAAGCATTCGATGAGAAA
TTATCGGTTGCTGTTAACAAAGAAACTAAACTACAAAACAACACTGGTGGAAAATTATGT
TCCCTTTTATTAATTGCCCCCTGTTTAAGATCTAATAACAATTTCTTACCCTATTATATT
CCTTTGCGCATATTTTCCCATATAATGTGTGGGTTAAATACGTTTAAGTTCACTAATTCA
TTAACCATAGTCTTATCATCTCATTTTTTGCACATCGGCGTACCAAGCTGAGCGGACAAT
GCCGCTTAAGCCATATATGGTGAAGCAAATGGGTAAAGTTTCCCGAATGTTCTTACTGGT
TCCTGCTTTTAGATTATTTATTTTTTGCATCCTCGTTGTTTTGCCGATGTTCCACGTTGT
TTTAAGCTGCCTTGTACAATGTACACTTTGCATGTCACTCGCCTACAATGCCAATATGCT
CCTACAGGCACACAGGCATCCAAATAAACCGACGAAAAAGTG
| SMART |
Anaphylatoxin/fibulin (IPR000020) - T[45-81] 0.049 - T[124-155] 1.5 |
| ProSitePatterns |
Anaphylatoxin/fibulin (IPR000020) - T[124-155] . |
| ProSiteProfiles |
Anaphylatoxin/fibulin (IPR000020) - T[124-155] 7.878 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[189-228] 6.652 - T[320-362] 12.779 - T[459-504] 13.541 - T[505-542] 10.804 |
| SMART |
EGF-like_dom (IPR000742) - T[192-228] 0.002 - T[232-274] 9.4 - T[278-319] 57.0 - T[323-362] 2.7E-4 - T[366-411] 200.0 - T[415-458] 18.0 - T[462-504] 8.1E-4 - T[508-546] 0.0047 - T[550-592] 23.0 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[193-228] 0.92 - T[229-274] 1.3E-6 - T[275-319] 7.7E-5 - T[320-362] 1.1E-10 - T[363-411] 8.0E-5 - T[412-458] 1.3E-7 - T[459-504] 4.6E-12 - T[505-546] 2.4E-9 - T[547-592] 3.8E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[212-227] . - T[346-361] . |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[229-273] 4.2E-10 - T[275-312] 5.4E-8 - T[320-361] 2.7E-11 - T[363-410] 9.5E-12 - T[412-457] 6.8E-10 - T[459-503] 5.6E-10 - T[505-545] 6.6E-7 - T[547-591] 2.4E-10 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[320-346] . - T[547-573] . |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[323-459] 2.12E-13 - T[443-596] 4.39E-11 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[337-348] . - T[477-488] . - T[521-532] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FBLN1_HUMAN | 37.946 % | 374 | 8.06E-120 |
| HMCN1_HUMAN | 31.317 % | 219 | 7.21E-60 |
| FBLN2_HUMAN | 31.258 % | 342 | 1.9E-103 |