- Transcript 'Cisavi.CG.ENS81.R88....' >
- Transcript 'KH2012:KH.C11.339.v1...' >
- Transcript 'KH2012:KH.L170.28.v2...' >
- Transcript 'KH2012:KH.L170.28.v5...' >
- Transcript 'KH2012:KH.C1.287.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.287.v1.A.nonSL3-1
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
KhC1 [407,015 / 413,953]
Amino acid sequence
Length: 431
>KH.C1.287.v1.A.nonSL3-1
NMSRYGGNDLRGSKGEAQYDTFSQQKDENLPPKQEYNGPPGMDADGLIETNYDKIVESFD
DMCLKEELLRGIYAYGFEKPSAIQQRAIQPCIEGKDVIAQAQSGTGKTATFAISVLQKID
ASLKQTQALVIAPTRELAQQIQKVVMALGDYESIHCHACIGGTSVRTEIQVFQTNPPQIV
VGTPGRVFDMINRKYLDTSKVKMFVLDEADEMLSRGFKDQIYEIFRTMPATIQVILLSAT
MPTDVLDVTTCFMPDPIRILVKKEELTLEGIQQFYVFVEKEEWKLDTLCDLYETLTITQA
VIFSNTRRKVDWLTEELQRRDFTVSALHGDMDQGDREVIMREFRSGSSRVLITTDLLARG
IDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTDDDKRTLKDIEKFYNTKI
EEMPMNVADLF
Nucleotide sequence
Length: 2,000
>KH2012:KH.C1.287.v1.A.nonSL3-1
GAGTAAGATATTCAACCGCGCTTACAACGTGAGTTTAGCGAGTACCATAGGATCTTTCTT
TCTGATAAAACATGTCACGTTACGGAGGAAACGATTTAAGAGGCTCTAAAGGTGAAGCTC
AGTACGACACCTTCAGTCAACAAAAAGATGAAAACTTGCCGCCCAAACAAGAATATAATG
GCCCACCTGGAATGGACGCCGATGGCTTGATTGAGACCAACTATGACAAAATAGTTGAAT
CGTTTGATGACATGTGCCTCAAAGAAGAACTCTTGAGAGGTATCTATGCCTATGGGTTTG
AAAAACCTTCAGCAATTCAACAAAGAGCCATCCAGCCTTGCATTGAAGGCAAAGACGTGA
TCGCTCAAGCCCAATCTGGGACCGGCAAAACGGCAACATTTGCCATTTCAGTTTTACAAA
AGATCGACGCTTCATTAAAACAAACGCAAGCGCTCGTGATCGCCCCAACCCGAGAGTTGG
CCCAGCAGATCCAAAAAGTGGTGATGGCACTCGGTGACTACGAGTCCATACATTGCCACG
CATGTATTGGAGGCACCAGTGTAAGGACAGAGATCCAAGTTTTTCAAACCAACCCCCCAC
AAATAGTGGTTGGCACTCCAGGTCGTGTGTTTGACATGATCAACAGGAAGTATCTGGACA
CATCCAAAGTCAAGATGTTCGTCCTTGATGAAGCCGATGAAATGTTGTCTAGAGGGTTCA
AGGACCAGATTTATGAAATCTTTAGAACTATGCCTGCTACCATTCAAGTGATCTTGTTAT
CGGCTACCATGCCCACTGACGTGTTGGACGTAACGACGTGCTTCATGCCCGACCCCATTC
GTATCCTTGTAAAGAAAGAGGAACTTACACTGGAAGGTATCCAACAGTTCTATGTATTTG
TGGAGAAAGAAGAATGGAAGTTGGACACCCTGTGTGATCTATATGAGACACTTACTATTA
CCCAAGCTGTCATATTCTCAAATACAAGGAGAAAAGTTGATTGGTTGACTGAGGAGCTCC
AACGAAGAGATTTCACCGTCTCTGCTTTGCATGGAGACATGGACCAAGGTGATCGTGAGG
TCATCATGCGCGAGTTCCGATCCGGGTCGTCTCGTGTCCTTATTACAACAGATCTACTTG
CACGTGGTATCGATGTGCAACAAGTGTCGCTTGTTATTAATTATGATCTGCCATCAAATA
GAGAGAATTATATTCATAGGATTGGACGTGGTGGTCGATTTGGTAGGAAAGGGGTCGCCA
TCAACTTTGTAACTGACGATGACAAACGAACACTCAAAGATATTGAAAAGTTTTACAATA
CTAAGATTGAGGAGATGCCAATGAATGTGGCTGATCTATTCTAGTTTAAAGTGGACCGAG
TTGACAACAGTTTGCCTCGTACTGTTGTTGTTGTTGTTAAACCTTAACGCATCTAAATAA
TAAGCGAATCTATACGTGCTGAACATATCTAGCTATCTATACATAAAGCAGCACTTTGTA
AATCTATCTGTCTACCAACGCCCAACTGTATTGCTTCTTATCGGAATATTTTTTCCTTTT
GGAATCTTTGTTATGTAAAAATAGCGATCTATTAAAACAAATTGAAACCTCTGTCCTTGG
GGCAGTTGGTGGCCCGCCCACCCTAACCAATCGCTTTGCGTTTATTTAAAATGCCTGTTA
TACTTTGTATTGTGTATTGCGTGTTTAGATTCTTATTTCCCAGCAGTTCAGTGAAAATGT
CCATTCATTTCCACCAATATTTTGCTCCCAGCCAAGTAACTAGTAAACTTTTCATGCGTG
TTTTATTTTACTGGAATGATATCTTATGGAGAGAAGTGACGTCATTGATTATTCGTAAAT
GGCGTTCTTGTCTGCACGCGCTCACAATATCTTTTAATTCATCTTCTCATGTTCAAATCA
TACCTTGATGTTGGATTGTTTTGTTATTAGGGAATTCTCTGGTAAAATGTGGGTAATAAT
AAACATGTTACGTTATATTT
| PANTHER |
EIF4A (IPR037583) - T[37-430] 3.0E-199 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[57-85] 10.625 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[76-274] 8.8E-60 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[82-246] 6.0E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[88-259] 30.49 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[125-413] 2.21E-74 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[205-213] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[270-431] 27.553 |
| CDD |
Helicase_C (IPR001650) - T[271-386] 9.36222E-35 |
| Pfam |
Helicase_C (IPR001650) - T[284-392] 3.6E-30 |
| SMART |
Helicase_C (IPR001650) - T[311-392] 1.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 67.639 % | 546 | 0 |
| IF4A1_HUMAN | 79.747 % | 632 | 0 |
| IF4A2_HUMAN | 79.899 % | 637 | 0 |