- Transcript 'KH2012:KH.C4.584.v1....' >
- Transcript 'KH2012:KH.L134.4.v3....' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C1.287.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.287.v1.A.nonSL5-1
Possible name(s)
EIF4A1; EIF4A2; EIF4A3
Gene model
Location
KhC1 [407,015 / 413,949]
Amino acid sequence
Length: 431
>KH.C1.287.v1.A.nonSL5-1
NMSRYGGNDLRGSKGEAQYDTFSQQKDENLPPKQEYNGPPGMDADGLIETNYDKIVESFD
DMCLKEELLRGIYAYGFEKPSAIQQRAIQPCIEGKDVIAQAQSGTGKTATFAISVLQKID
ASLKQTQALVIAPTRELAQQIQKVVMALGDYESIHCHACIGGTSVRTEIQVFQTNPPQIV
VGTPGRVFDMINRKYLDTSKVKMFVLDEADEMLSRGFKDQIYEIFRTMPATIQVILLSAT
MPTDVLDVTTCFMPDPIRILVKKEELTLEGIQQFYVFVEKEEWKLDTLCDLYETLTITQA
VIFSNTRRKVDWLTEELQRRDFTVSALHGDMDQGDREVIMREFRSGSSRVLITTDLLARG
IDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTDDDKRTLKDIEKFYNTKI
EEMPMNVADLF
Nucleotide sequence
Length: 1,996
>KH2012:KH.C1.287.v1.A.nonSL5-1
AAGATATTCAACCGCGCTTACAACGTGAGTTTAGCGAGTACCATAGGATCTTTCTTTCTG
ATAAAACATGTCACGTTACGGAGGAAACGATTTAAGAGGCTCTAAAGGTGAAGCTCAGTA
CGACACCTTCAGTCAACAAAAAGATGAAAACTTGCCGCCCAAACAAGAATATAATGGCCC
ACCTGGAATGGACGCCGATGGCTTGATTGAGACCAACTATGACAAAATAGTTGAATCGTT
TGATGACATGTGCCTCAAAGAAGAACTCTTGAGAGGTATCTATGCCTATGGGTTTGAAAA
ACCTTCAGCAATTCAACAAAGAGCCATCCAGCCTTGCATTGAAGGCAAAGACGTGATCGC
TCAAGCCCAATCTGGGACCGGCAAAACGGCAACATTTGCCATTTCAGTTTTACAAAAGAT
CGACGCTTCATTAAAACAAACGCAAGCGCTCGTGATCGCCCCAACCCGAGAGTTGGCCCA
GCAGATCCAAAAAGTGGTGATGGCACTCGGTGACTACGAGTCCATACATTGCCACGCATG
TATTGGAGGCACCAGTGTAAGGACAGAGATCCAAGTTTTTCAAACCAACCCCCCACAAAT
AGTGGTTGGCACTCCAGGTCGTGTGTTTGACATGATCAACAGGAAGTATCTGGACACATC
CAAAGTCAAGATGTTCGTCCTTGATGAAGCCGATGAAATGTTGTCTAGAGGGTTCAAGGA
CCAGATTTATGAAATCTTTAGAACTATGCCTGCTACCATTCAAGTGATCTTGTTATCGGC
TACCATGCCCACTGACGTGTTGGACGTAACGACGTGCTTCATGCCCGACCCCATTCGTAT
CCTTGTAAAGAAAGAGGAACTTACACTGGAAGGTATCCAACAGTTCTATGTATTTGTGGA
GAAAGAAGAATGGAAGTTGGACACCCTGTGTGATCTATATGAGACACTTACTATTACCCA
AGCTGTCATATTCTCAAATACAAGGAGAAAAGTTGATTGGTTGACTGAGGAGCTCCAACG
AAGAGATTTCACCGTCTCTGCTTTGCATGGAGACATGGACCAAGGTGATCGTGAGGTCAT
CATGCGCGAGTTCCGATCCGGGTCGTCTCGTGTCCTTATTACAACAGATCTACTTGCACG
TGGTATCGATGTGCAACAAGTGTCGCTTGTTATTAATTATGATCTGCCATCAAATAGAGA
GAATTATATTCATAGGATTGGACGTGGTGGTCGATTTGGTAGGAAAGGGGTCGCCATCAA
CTTTGTAACTGACGATGACAAACGAACACTCAAAGATATTGAAAAGTTTTACAATACTAA
GATTGAGGAGATGCCAATGAATGTGGCTGATCTATTCTAGTTTAAAGTGGACCGAGTTGA
CAACAGTTTGCCTCGTACTGTTGTTGTTGTTGTTAAACCTTAACGCATCTAAATAATAAG
CGAATCTATACGTGCTGAACATATCTAGCTATCTATACATAAAGCAGCACTTTGTAAATC
TATCTGTCTACCAACGCCCAACTGTATTGCTTCTTATCGGAATATTTTTTCCTTTTGGAA
TCTTTGTTATGTAAAAATAGCGATCTATTAAAACAAATTGAAACCTCTGTCCTTGGGGCA
GTTGGTGGCCCGCCCACCCTAACCAATCGCTTTGCGTTTATTTAAAATGCCTGTTATACT
TTGTATTGTGTATTGCGTGTTTAGATTCTTATTTCCCAGCAGTTCAGTGAAAATGTCCAT
TCATTTCCACCAATATTTTGCTCCCAGCCAAGTAACTAGTAAACTTTTCATGCGTGTTTT
ATTTTACTGGAATGATATCTTATGGAGAGAAGTGACGTCATTGATTATTCGTAAATGGCG
TTCTTGTCTGCACGCGCTCACAATATCTTTTAATTCATCTTCTCATGTTCAAATCATACC
TTGATGTTGGATTGTTTTGTTATTAGGGAATTCTCTGGTAAAATGTGGGTAATAATAAAC
ATGTTACGTTATATTT
| PANTHER |
EIF4A (IPR037583) - T[37-430] 3.0E-199 |
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[57-85] 10.625 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[76-274] 8.8E-60 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[82-246] 6.0E-47 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[88-259] 30.49 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[125-413] 2.21E-74 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[205-213] . |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[270-431] 27.553 |
| CDD |
Helicase_C (IPR001650) - T[271-386] 9.36222E-35 |
| Pfam |
Helicase_C (IPR001650) - T[284-392] 3.6E-30 |
| SMART |
Helicase_C (IPR001650) - T[311-392] 1.5E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IF4A3_HUMAN | 67.639 % | 546 | 0 |
| IF4A1_HUMAN | 79.747 % | 632 | 0 |
| IF4A2_HUMAN | 79.899 % | 637 | 0 |