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TRANSCRIPT CARD

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  1. Clone 'ma008k21' > 
  2. Clone 'cima820459' > 
  3. Clone 'ma105i14' > 
  4. Clone 'cicl060j13' > 
  5. Transcript 'KH2012:KH.C13.106.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.106.v1.A.nonSL3-1

Possible name(s)

GMDS; TGDS; UXS1

Gene model

KH2012:KH.C13.106

Location

KhC13 [65,548 / 72,294]

Sequences

Amino acid sequence

Length: 376

>KH.C13.106.v1.A.nonSL3-1
LRNMADSSCNGKRKNGDSCDTETKKQKKTALVTGITGQDGSYLAELLIEKGYEVHGIIRR
ASQPNTARIEHLYADRATHKEGSMKLHYGDLTDSSCLVKIINQVKPNEIYNLGAMSHVKV
SFDLAEYTADVDGVGTLRLLDAIRTCGMSDSVRFYQASTSEMFGKVQEIPQKETTPFYPR
SPYAAAKVYAYWIVVNYREAYGMHASNGILFNHESPRRGFNFVTRKITRSVAKIHLGLQE
LITLGNLDSKRDWGHARDYVKGMWMMMQHDEPGDYVLSTNETHSVREFVEKSFKHIGVEL
EWQGEGVNEIGVDKSTGVKRVQISERYYRPTEVEFLLGDYSKAKKVLGWSPDIKFNELVK
EMVEADINLMKKTPNA

Nucleotide sequence

Length: 2,382

>KH2012:KH.C13.106.v1.A.nonSL3-1
ACGCGTGTTCAACTGACATTTTTGCCACGAACCTTCCAAGAATTCGTATTCCGATTCAGT
CGCTCACTGTTGATAAGATTGTTTTGTTGTTTAATTAGTAGTTAAGAAACATGGCGGACA
GTAGTTGTAACGGAAAACGAAAAAACGGAGATTCTTGCGACACGGAAACAAAAAAGCAAA
AGAAAACAGCGTTGGTTACCGGCATAACTGGTCAAGATGGTTCTTACCTGGCCGAACTAC
TCATCGAAAAAGGTTACGAGGTTCATGGTATAATACGAAGAGCTAGTCAGCCAAACACAG
CACGGATAGAACATCTGTATGCAGATCGAGCAACACACAAAGAGGGGAGCATGAAACTGC
ATTATGGTGATCTCACTGATAGTAGTTGTCTCGTTAAAATCATTAATCAGGTTAAACCAA
ATGAGATCTACAATCTCGGTGCAATGAGCCACGTGAAGGTGTCGTTTGATTTAGCTGAAT
ATACAGCAGATGTTGATGGGGTTGGTACGTTAAGGTTGCTTGATGCTATACGAACTTGTG
GAATGAGCGACTCAGTAAGGTTCTATCAAGCTTCAACAAGTGAGATGTTTGGAAAGGTCC
AGGAAATCCCGCAAAAAGAGACGACCCCGTTTTACCCTCGATCCCCGTATGCTGCCGCAA
AGGTGTACGCATACTGGATAGTTGTGAACTACCGTGAGGCGTATGGCATGCACGCAAGTA
ATGGTATTCTGTTTAACCATGAAAGCCCAAGAAGAGGTTTTAACTTCGTGACGAGGAAAA
TTACGCGGAGTGTCGCGAAGATACATCTAGGATTACAAGAATTGATAACTCTTGGTAACC
TTGATTCGAAGCGTGATTGGGGTCATGCACGTGATTATGTGAAAGGGATGTGGATGATGA
TGCAGCATGATGAACCAGGAGATTATGTTTTATCGACCAACGAGACACACAGTGTACGAG
AGTTTGTTGAGAAATCGTTCAAGCACATCGGGGTGGAACTTGAATGGCAAGGAGAGGGTG
TGAATGAGATTGGTGTAGATAAATCTACAGGGGTTAAGCGAGTTCAAATAAGTGAGCGAT
ATTATCGACCCACCGAAGTTGAATTTCTTCTCGGAGATTATTCCAAAGCTAAGAAGGTTC
TTGGTTGGTCACCTGATATTAAGTTTAACGAGTTGGTGAAAGAAATGGTGGAAGCTGATA
TCAATCTCATGAAGAAAACACCAAATGCTTAAATCATAAACTTGGGACTTCGGGGTCATG
AACTTATGACTTCGGGGTCATGAACTTATGACCTCGGGTCATGAACTTGTGACTTCGGGG
TCATGAACCCGTGACCGCAGGGGTCATGGTTTTACAGTTTTTTGCCCTGTTTATAACCTA
TTGCTTGTATCTATCTGCTTTAAGGTACCTTAGTAGCTTAATGTAAATTCTCAATCTATA
CACACTCTCATGTTACTTGATTTTTTTTACTTCAAACACAAGTTATTTGTTCTTCAAAAA
ATTTTAACTTCATTTTTTTAAGCAGTTTTCATTGTGATATAACTTCAACTATTCACCTTA
TGTCTTCATGATAACATTGTCTTCAATATGAGTTGTTTCAGCAAAATGTCTCGTTTTTTT
GTGGGTTGGAAAATTGTTCCTGTTAAAACTTATTTACCTTTAAACACCTGAAATAATCGG
TGCAGCTATTTCTTACTGTTTAACACTATTTATATAACTTTGGCTTATATAACTATATAA
ATTATAACTTTTATATATTTAGCAAAATTTCAATTAGAAAATAAACAATTTATAAATCAC
CTGAAAAATGGTGCAACCTGTTCAAAATTATTGTTTTAACAACTTTTCACAAACTACTTG
TCTATATAGTAGGTTGGGGTAAGATGGTCAATCTTTTCATTTTATTTTCTGGTATCATTT
TATATTAAACAAAAAATTGACCATTTTATAAAACTGTATCCTCACGATTCTAAAGATGTT
GTTAATTGTTGAAACACGATTAAGAAATATGGGATATTATTTGCAAACAGTACCCATCTT
ACCCCACAATACTATATTTCTCTTTTCAACTGAACAATCTAAGCCATTTTATTTCAACGA
TTATTTCTTCATGAAGCTTATTATGCAGTTCTGTAGCTTATTTAGGACCGTGTGTTTTAC
CCAGCACTTTATAATATAAACTGTCTCTCCACAAAACCGTTTGTGACGTAACAAACCAAA
CTAACGACTTCCTTTTCCAGTATGGTGCTCTGTTACCTTATATATACATGGGCGTTCTAT
ATATTGATAACAATTCCATATTTCCAGTGTGTTTGTTCCGTGTTGTATATACCGTGTGTA
GGATTAGCAGTAATTGATATAATAAAAGCTGAAGCTAGTTCA

InterProScan

PANTHER
GDP_Man_deHydtase (IPR006368) - T[7-374] 3.2E-179
Hamap
GDP_Man_deHydtase (IPR006368) - T[28-372] 56.172
TIGRFAM
GDP_Man_deHydtase (IPR006368) - T[28-369] 3.2E-181
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[28-368] 6.03E-81
Pfam
NAD(P)-bd_dom (IPR016040) - T[31-362] 1.0E-157

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GMDS_HUMAN 69.355 % 553 0