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  1. Clone 'cien45890' > 
  2. Transcript 'KH2012:KH.C13.106.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.106.v1.R.ND1-1

Possible name(s)

GMDS; TGDS; UXS1

Gene model

KH2012:KH.C13.106

Location

KhC13 [65,561 / 72,294]

Sequences

Amino acid sequence

Length: 376

>KH.C13.106.v1.R.ND1-1
LRNMADSSCNGKRKNGDSCDTETKKQKKTALVTGITGQDGSYLAELLIEKGYEVHGIIRR
ASQPNTARIEHLYADRATHKEGSMKLHYGDLTDSSCLVKIINQVKPNEIYNLGAMSHVKV
SFDLAEYTADVDGVGTLRLLDAIRTCGMSDSVRFYQASTSEMFGKVQEIPQKETTPFYPR
SPYAAAKVYAYWIVVNYREAYGMHASNGILFNHESPRRGFNFVTRKITRSVAKIHLGLQE
LITLGNLDSKRDWGHARDYVKGMWMMMQHDEPGDYVLSTNETHSVREFVEKSFKHIGVEL
EWQGEGVNEIGVDKSTGVKRVQISERYYRPTEVEFLLGDYSKAKKVLGWSPDIKFNELVK
EMVEADINLMKKTPNA

Nucleotide sequence

Length: 2,369

>KH2012:KH.C13.106.v1.R.ND1-1
TGACATTTTTGCCACGAACCTTCCAAGAATTCGTATTCCGATTCAGTCGCTCACTGTTGA
TAAGATTGTTTTGTTGTTTAATTAGTAGTTAAGAAACATGGCGGACAGTAGTTGTAACGG
AAAACGAAAAAACGGAGATTCTTGCGACACGGAAACAAAAAAGCAAAAGAAAACAGCGTT
GGTTACCGGCATAACTGGTCAAGATGGTTCTTACCTGGCCGAACTACTCATCGAAAAAGG
TTACGAGGTTCATGGTATAATACGAAGAGCTAGTCAGCCAAACACAGCACGGATAGAACA
TCTGTATGCAGATCGAGCAACACACAAAGAGGGGAGCATGAAACTGCATTATGGTGATCT
CACTGATAGTAGTTGTCTCGTTAAAATCATTAATCAGGTTAAACCAAATGAGATCTACAA
TCTCGGTGCAATGAGCCACGTGAAGGTGTCGTTTGATTTAGCTGAATATACAGCAGATGT
TGATGGGGTTGGTACGTTAAGGTTGCTTGATGCTATACGAACTTGTGGAATGAGCGACTC
AGTAAGGTTCTATCAAGCTTCAACAAGTGAGATGTTTGGAAAGGTCCAGGAAATCCCGCA
AAAAGAGACGACCCCGTTTTACCCTCGATCCCCGTATGCTGCCGCAAAGGTGTACGCATA
CTGGATAGTTGTGAACTACCGTGAGGCGTATGGCATGCACGCAAGTAATGGTATTCTGTT
TAACCATGAAAGCCCAAGAAGAGGTTTTAACTTCGTGACGAGGAAAATTACGCGGAGTGT
CGCGAAGATACATCTAGGATTACAAGAATTGATAACTCTTGGTAACCTTGATTCGAAGCG
TGATTGGGGTCATGCACGTGATTATGTGAAAGGGATGTGGATGATGATGCAGCATGATGA
ACCAGGAGATTATGTTTTATCGACCAACGAGACACACAGTGTACGAGAGTTTGTTGAGAA
ATCGTTCAAGCACATCGGGGTGGAACTTGAATGGCAAGGAGAGGGTGTGAATGAGATTGG
TGTAGATAAATCTACAGGGGTTAAGCGAGTTCAAATAAGTGAGCGATATTATCGACCCAC
CGAAGTTGAATTTCTTCTCGGAGATTATTCCAAAGCTAAGAAGGTTCTTGGTTGGTCACC
TGATATTAAGTTTAACGAGTTGGTGAAAGAAATGGTGGAAGCTGATATCAATCTCATGAA
GAAAACACCAAATGCTTAAATCATAAACTTGGGACTTCGGGGTCATGAACTTATGACTTC
GGGGTCATGAACTTATGACCTCGGGTCATGAACTTGTGACTTCGGGGTCATGAACCCGTG
ACCGCAGGGGTCATGGTTTTACAGTTTTTTGCCCTGTTTATAACCTATTGCTTGTATCTA
TCTGCTTTAAGGTACCTTAGTAGCTTAATGTAAATTCTCAATCTATACACACTCTCATGT
TACTTGATTTTTTTTACTTCAAACACAAGTTATTTGTTCTTCAAAAAATTTTAACTTCAT
TTTTTTAAGCAGTTTTCATTGTGATATAACTTCAACTATTCACCTTATGTCTTCATGATA
ACATTGTCTTCAATATGAGTTGTTTCAGCAAAATGTCTCGTTTTTTTGTGGGTTGGAAAA
TTGTTCCTGTTAAAACTTATTTACCTTTAAACACCTGAAATAATCGGTGCAGCTATTTCT
TACTGTTTAACACTATTTATATAACTTTGGCTTATATAACTATATAAATTATAACTTTTA
TATATTTAGCAAAATTTCAATTAGAAAATAAACAATTTATAAATCACCTGAAAAATGGTG
CAACCTGTTCAAAATTATTGTTTTAACAACTTTTCACAAACTACTTGTCTATATAGTAGG
TTGGGGTAAGATGGTCAATCTTTTCATTTTATTTTCTGGTATCATTTTATATTAAACAAA
AAATTGACCATTTTATAAAACTGTATCCTCACGATTCTAAAGATGTTGTTAATTGTTGAA
ACACGATTAAGAAATATGGGATATTATTTGCAAACAGTACCCATCTTACCCCACAATACT
ATATTTCTCTTTTCAACTGAACAATCTAAGCCATTTTATTTCAACGATTATTTCTTCATG
AAGCTTATTATGCAGTTCTGTAGCTTATTTAGGACCGTGTGTTTTACCCAGCACTTTATA
ATATAAACTGTCTCTCCACAAAACCGTTTGTGACGTAACAAACCAAACTAACGACTTCCT
TTTCCAGTATGGTGCTCTGTTACCTTATATATACATGGGCGTTCTATATATTGATAACAA
TTCCATATTTCCAGTGTGTTTGTTCCGTGTTGTATATACCGTGTGTAGGATTAGCAGTAA
TTGATATAATAAAAGCTGAAGCTAGTTCA

InterProScan

PANTHER
GDP_Man_deHydtase (IPR006368) - T[7-374] 3.2E-179
Hamap
GDP_Man_deHydtase (IPR006368) - T[28-372] 56.172
TIGRFAM
GDP_Man_deHydtase (IPR006368) - T[28-369] 3.2E-181
SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[28-368] 6.03E-81
Pfam
NAD(P)-bd_dom (IPR016040) - T[31-362] 1.0E-157

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
GMDS_HUMAN 69.355 % 553 0