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TRANSCRIPT CARD

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  1. Clone 'cima820361' > 
  2. Transcript 'KH2012:KH.C3.310.v1....' > 
  3. Transcript 'KH2012:KH.C13.116.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.116.v1.A.nonSL2-1

Possible name(s)

COL11A2

Gene model

KH2012:KH.C13.116

Location

KhC13 [1,601,999 / 1,630,881]

Sequences

Amino acid sequence

Length: 1,307

>KH.C13.116.v1.A.nonSL2-1
WLLCCISLAIIPNVQTARIDLLDRFKISTSLGVSPVPGSCANAKKRAAPRTAFRLSRNTQ
AIALPSDYVFSEFVRDGFPQEFSITAIIKPKVGVRNPFLLQMMHADRWRQLGFTVGEEPE
FHYRTDTDVPPDYPTFSSVNLADGRWHKVAWSVYNENVQLWVDCVMVTEKIVRSDANTQL
NLGGVVLLGKEPGTSGNGFVGDIENLYFDSDPSVAGQMCFPASNLSPNCGSTAAAIREEP
ETAVFSAAGTPNPEESEGLIIPDSSLPGERDGGRGDNGDGGSRGQKGEKGEQAVIEPGIF
IPGPPGPPGEPGLDGPPGFQGPPGGPGEMGDRGLDGPPGFQGPPGGPGEMGDRGPAGRDG
LPGAKGLPGPPGRHIMIPFRIAQPHGQKGPGSNAPAELQAQLALTQARLALQGPPGPQGL
SGMTGAAGDMGPAGIKGESGEPGPMGQRGSRGPPGLDGVSGKTGRPGEDGLRGEPGPVGI
KGDRGYDGLPGLPGPKGHRGETGGVGPIGPPGVDGEQGEHGEPGPRGLPGEAGPRGELGH
KGPPGVSGPPGPRGVHGQQGSKGNLGPQGEPGPPGQQGAPGPQGISGPQGLMGPPGVKGP
PGKSGLPGIPGADGVPGHPGNEGPSGSKGSQGQFGPQGPQGYPGTRGVKGEGGVRGIKGN
KGEKGLDGLAGFKGDMGPKGDGGISGAPGPRGEDGPDGPKGREGPRGEVGPVGLPGEKGK
IGLPGILGYPGRSGIKGSLGKPGKTGHTGLKGDRGLEGKRGQQGQRGPKGPRGKRGPRGS
TGKSGPKGDRGQDGPQGPIGERGPPGPRGASGYTGSKGPPGPPGKDGLPGHPGSRGETGF
QGKTGPPGPAGVVGPQGPTGENGPSGERGHPGPPGPIGEPGLSGSAGKEGSKGDRGPNGP
PGKMGATGSPGFPGSRGPQGPVGAPGLKGNEGPPGPTGPAGVSGQRGPPGPSGQIGPLGR
PGSSGPAGPPGENGSPGGPGGPGPAGRDGLQGPVGLPGPPGSIGPRGEDGDKGEAGPPGS
TGLKGGKGEHGPPGPPGEQGNSGEPGPAGNDGEPGARGQQGLYGEKGDEGARGFPGPPGP
RGLQGIPGTSGNKGDSGDAGPLGPPGPPGQRGPPGVQGADGPLGPPGTYGQPGNVGDKGE
PGNVGAPGIPGDSGPMGPNGEAGQKGETGPSGPQGENGPKGPRGDDGPKGEPGPIGHPGD
PGVAGIPGTMGDEGPPGDVGDTGAPGEPGPPGPIGEVGPSGGPGRRGPAGNPGTEGRSGE
KGAKGEAGGIGPVGEPGAHGPQGKHGKQGCTGLNAIAWPCRCTWVAW

Nucleotide sequence

Length: 5,354

>KH2012:KH.C13.116.v1.A.nonSL2-1
GTGGCTGCTGTGCTGCATTAGCTTGGCTATAATTCCAAACGTACAAACGGCTCGAATTGA
CTTGTTGGACAGATTTAAGATATCGACCAGTCTTGGGGTGTCTCCTGTTCCGGGGAGTTG
CGCCAATGCAAAGAAAAGGGCTGCACCAAGAACTGCCTTCAGGCTTTCTAGAAACACCCA
GGCCATTGCTCTACCATCGGACTATGTCTTCAGCGAATTCGTTCGCGATGGCTTCCCTCA
AGAGTTCTCGATCACGGCAATTATCAAACCAAAAGTTGGGGTCAGGAATCCATTCCTGCT
CCAAATGATGCACGCTGATCGGTGGAGACAACTTGGTTTTACTGTGGGAGAAGAACCAGA
GTTCCACTACAGAACAGACACAGACGTTCCACCTGACTATCCAACCTTCTCGAGTGTCAA
TCTTGCTGATGGAAGATGGCACAAAGTTGCGTGGTCAGTTTACAACGAGAACGTACAGTT
GTGGGTGGATTGCGTCATGGTGACGGAGAAGATCGTTCGATCTGACGCGAACACACAACT
CAACCTTGGAGGTGTGGTTTTGCTAGGAAAAGAACCCGGGACATCTGGAAATGGATTTGT
GGGAGACATAGAAAACCTATACTTCGACTCAGACCCGAGTGTAGCTGGCCAGATGTGTTT
CCCAGCATCCAACCTATCTCCAAACTGTGGATCTACAGCAGCAGCCATCAGGGAAGAACC
AGAAACTGCTGTTTTCTCTGCAGCTGGCACCCCAAACCCAGAGGAATCTGAAGGTTTAAT
AATTCCTGATTCATCTTTACCTGGTGAAAGGGATGGGGGAAGGGGAGATAATGGAGATGG
TGGAAGCAGGGGACAAAAAGGAGAGAAGGGAGAACAAGCTGTGATTGAACCTGGGATTTT
CATTCCTGGACCCCCCGGACCGCCTGGAGAACCTGGTCTCGACGGACCTCCTGGATTCCA
AGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGGGGTCTCGACGGACCTCCTGGATT
CCAAGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGGGGCCCTGCTGGTAGAGATGG
ACTTCCTGGCGCCAAGGGGCTTCCTGGTCCGCCTGGTCGACACATCATGATACCATTCAG
AATAGCTCAACCTCATGGACAGAAGGGACCAGGTTCGAACGCACCAGCTGAACTCCAGGC
ACAACTTGCTTTAACACAAGCTAGGCTTGCTCTACAAGGACCACCTGGACCACAGGGATT
GTCAGGAATGACTGGAGCTGCTGGTGACATGGGACCTGCAGGCATTAAAGGCGAAAGTGG
TGAACCAGGACCTATGGGACAAAGGGGGTCACGTGGTCCCCCTGGTTTGGATGGTGTGTC
CGGCAAAACTGGAAGACCAGGAGAGGATGGTTTACGAGGTGAACCTGGACCTGTTGGAAT
CAAGGGTGACAGAGGATATGATGGTCTTCCTGGCTTACCAGGACCAAAGGGGCACAGGGG
TGAAACTGGCGGAGTTGGACCTATTGGACCACCAGGTGTCGATGGAGAGCAGGGAGAACA
TGGTGAACCAGGACCTCGTGGATTGCCTGGCGAGGCGGGACCACGTGGAGAGTTGGGACA
CAAGGGACCACCTGGTGTTTCTGGGCCTCCTGGACCAAGAGGTGTTCATGGGCAACAAGG
ATCAAAAGGAAACTTGGGCCCACAAGGAGAGCCTGGTCCACCTGGACAACAAGGAGCACC
CGGGCCACAGGGTATATCTGGTCCCCAAGGGTTGATGGGTCCACCTGGAGTCAAAGGACC
CCCCGGGAAGTCTGGGTTACCCGGTATTCCTGGGGCTGATGGGGTTCCTGGTCACCCTGG
TAACGAGGGCCCTAGTGGGTCAAAGGGGTCACAGGGTCAATTTGGACCACAAGGGCCACA
GGGTTATCCTGGTACCAGAGGTGTCAAAGGAGAAGGAGGAGTGAGAGGAATAAAAGGAAA
CAAAGGAGAAAAAGGTCTCGATGGTTTAGCCGGTTTCAAAGGTGACATGGGACCTAAAGG
AGATGGCGGGATTTCTGGCGCTCCAGGTCCACGCGGAGAAGATGGGCCAGATGGCCCTAA
GGGAAGAGAAGGTCCTCGTGGAGAAGTTGGCCCTGTTGGTTTGCCCGGTGAAAAGGGAAA
GATTGGTCTCCCTGGTATTCTGGGTTATCCTGGAAGATCTGGTATCAAGGGGTCACTGGG
CAAGCCTGGAAAAACTGGACATACTGGACTCAAGGGTGACCGGGGCTTGGAAGGCAAGAG
AGGTCAACAAGGTCAAAGGGGGCCAAAGGGTCCACGAGGCAAACGAGGTCCGAGAGGATC
TACTGGGAAATCTGGACCAAAGGGTGACAGAGGACAAGATGGACCGCAAGGACCAATCGG
AGAAAGAGGCCCACCAGGACCCAGAGGAGCAAGTGGTTACACTGGCAGCAAGGGACCCCC
TGGCCCACCAGGAAAAGATGGTTTACCTGGACACCCTGGAAGTCGGGGTGAAACAGGTTT
CCAAGGGAAGACTGGGCCCCCTGGACCTGCTGGTGTTGTAGGACCTCAAGGTCCAACCGG
TGAAAATGGACCATCAGGGGAGCGAGGACACCCGGGACCTCCTGGACCAATTGGAGAACC
TGGTTTGTCTGGATCTGCTGGAAAAGAGGGATCTAAGGGAGACAGAGGACCAAATGGACC
CCCAGGAAAGATGGGTGCAACAGGTTCACCGGGTTTCCCAGGTTCAAGGGGACCACAAGG
CCCTGTGGGTGCTCCAGGATTGAAGGGTAATGAAGGACCTCCTGGCCCCACTGGACCAGC
TGGCGTCAGTGGTCAACGCGGCCCTCCTGGTCCCTCTGGCCAAATTGGACCTCTGGGTCG
CCCAGGGTCAAGTGGGCCTGCTGGACCACCTGGTGAGAACGGAAGCCCCGGTGGACCTGG
AGGCCCAGGACCTGCTGGTAGAGATGGTCTACAAGGGCCTGTTGGTCTTCCTGGTCCTCC
TGGTTCCATTGGCCCAAGAGGAGAAGATGGGGACAAGGGTGAAGCTGGTCCACCAGGCTC
CACAGGTTTGAAAGGCGGGAAAGGCGAACATGGGCCACCTGGACCTCCCGGTGAACAAGG
AAACAGTGGAGAACCTGGACCTGCTGGTAACGATGGTGAACCCGGGGCTCGGGGTCAACA
AGGTTTATATGGAGAGAAGGGTGATGAAGGGGCTAGGGGATTCCCCGGACCCCCAGGACC
CCGTGGCTTACAGGGTATTCCCGGAACTTCTGGCAACAAAGGTGACTCAGGAGATGCTGG
ACCTTTGGGACCACCTGGCCCTCCCGGACAACGAGGCCCCCCTGGTGTTCAAGGTGCCGA
TGGACCTCTTGGCCCCCCTGGTACTTATGGACAACCTGGCAACGTTGGAGACAAGGGTGA
ACCTGGTAATGTAGGAGCACCTGGTATTCCTGGAGATTCGGGCCCAATGGGACCAAACGG
AGAAGCGGGACAAAAGGGTGAAACTGGGCCATCGGGACCACAAGGTGAAAATGGACCAAA
AGGACCTCGCGGAGATGATGGTCCTAAAGGAGAACCTGGACCCATCGGCCATCCTGGAGA
CCCTGGTGTGGCTGGTATTCCTGGTACAATGGGAGACGAAGGACCACCGGGTGACGTTGG
TGACACGGGAGCACCTGGAGAGCCGGGACCTCCTGGACCCATCGGTGAGGTTGGACCTTC
TGGTGGCCCCGGAAGACGGGGACCTGCCGGTAACCCTGGAACTGAAGGACGATCTGGAGA
GAAAGGAGCTAAGGGTGAAGCTGGTGGTATTGGACCTGTAGGCGAACCTGGTGCCCATGG
ACCTCAAGGTAAACATGGAAAACAAGGATGTACCGGTTTGAATGCTATTGCCTGGCCCTG
CAGGTGCACCTGGGTTGCCTGGTAACGCTGGAGCTGATGGCCCTGTTGGCCCAATGGGAC
CTACTGGTTTGAAAGGAATAAAGGGAGAAGTTGGCCCCGGTGGTGAAAAGGGTCACCCTG
GTTTGATCGGTTTGGTCGGACCCCCAGGTGAAGAGGGTGAGAAGGGTGAACGTGGACCCC
ATGGTAGAGATGGACCCCCAGGGGTTAAGGGTGACGATGGAAGACCTGGCCCCGCTGGCC
CAATAGGGCCAATGGGACCACCTGGGTTACCGGGTGGAGTTGGAATGAAAGGAAATAAGG
GAAGCTTGGGACCCACCGGCCCCAAGGGAGATGAAGGTATCCAAGGGCCTCCTGGCCCTC
CTGGTCCACCCGGCGAAGTCTTCAACGCAGGAGCACTTAGAGCGCCGAGCTCAATCAAGG
CTCGTGCAAGAAGGTCAGCTGAGGAGGAGACAGAAGGTGCCAGAGTGAAACGCCAAGCTG
TGTTTGAGGAGAACATGGTTGATGATTATCCACAAGGCTTGGAGGAAATCTTCGGGATGA
TGGAATCAATTAAGATGGATCTGCAAATGTTGAAAGAACCAATGGGACGAACCAGAGAAA
ATCCTGGCAGGACTTGTAAGGATATCTGGTACTGTCATCCAGACTTTGCTTCAGGATTAT
ACTGGATCGATCCGAACGGTGGGTGCTCGGCAGACGCCATTGAGGTCTGGTGTGATTTTG
AGGCAGAAGGAGACACTTGTCTCAATCCTCTCACGGTTACCATTCCAGCTCGAAGGTGGC
CTAAAGCTTCACCTGGAGATTGGTACAGCTCTTACAGGCTTGGGGAGAAGTTTGATTACA
ACACCACCATCCCACAATACAACTTCCTGAGGTTGCTGTCGAGTCACGCTCGCCAGAGAT
TCACATACAAGTGTGTCAACTCTATTGGATGGGAAGACCAACAGAACGATAACTTCAACA
AAGCAATTCAACTTATGGGTTCAAATGAAGTTGTTTTCACTCATGGAAGTGAAGAAGTAA
CAGTGTTGGAGGACTCTTGCAAGAGTGGACAGGGAACTGGACAAGTTGTGATTGAGGTTC
GAACCAAAGAATTAGAGATGTTGCCGTTGGTCGATTACAAGGCCTTCGATTTTGGAACAC
GACCACAACGGCACGGCTATCATCTCGACCGTGCTTGTTTCAGTGGCTGAATGTAATCAT
GTGTGTCTTCACGGGGCATTTATGATGGGTGGCACGCGCCACGGGATGTGTACGCCTCCT
CTTAATGAAGTCGTGTACACTATGGAGAAGAAATGGGTACGCAAGTGCTGGTGCATACCC
ATTTCTTCATCATCACATGACCTCTGTGGACCAATCAAATTCTTTGTGGGATTCTAGACT
GTGTGATGTCATCAGTATTACGTAATACCTCACTGTTGCTGCTGAGTTGCGTTTTTGGCG
GAAATACAAACTTT

InterProScan

SMART
Laminin_G (IPR001791) - T[18-212] 1.1E-15 - T[80-211] 3.3E-6
SUPERFAMILY
ConA-like_dom_sf (IPR013320) - T[19-219] 1.19E-29
Pfam
Laminin_G (IPR001791) - T[135-210] 3.2E-8
Pfam
Collagen (IPR008160) - T[315-373] 4.2E-7 - T[413-468] 2.1E-8 - T[1235-1292] 1.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
COBA2_HUMAN 64.961 % 575 6.16E-179
COBA1_HUMAN 54.943 % 469 4.57E-140
CO5A3_HUMAN 59.144 % 494 2.06E-149