- Clone 'AHC0AAA202YN15' >
- Clone 'AHC0AAA181YK19' >
- Transcript 'KH2012:KH.S215.9.v1....' >
- Transcript 'KH2012:KH.C8.904.v1....' >
- Transcript 'KH2012:KH.C13.116.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.116.v1.A.nonSL3-1
Possible name(s)
COL11A2
Gene model
Location
KhC13 [1,601,812 / 1,630,881]
Amino acid sequence
Length: 1,344
>KH.C13.116.v1.A.nonSL3-1
RARKRPRTIRSIVSETMGTSTSSIVTPQWGKQSALAAWLLCCISLAIIPNVQTARIDLLD
RFKISTSLGVSPVPGSCANAKKRAAPRTAFRLSRNTQAIALPSDYVFSEFVRDGFPQEFS
ITAIIKPKVGVRNPFLLQMMHADRWRQLGFTVGEEPEFHYRTDTDVPPDYPTFSSVNLAD
GRWHKVAWSVYNENVQLWVDCVMVTEKIVRSDANTQLNLGGVVLLGKEPGTSGNGFVGDI
ENLYFDSDPSVAGQMCFPASNLSPNCGSTAAAIREEPETAVFSAAGTPNPEESEGLIIPD
SSLPGERDGGRGDNGDGGSRGQKGEKGEQAVIEPGIFIPGPPGPPGEPGLDGPPGFQGPP
GGPGEMGDRGLDGPPGFQGPPGGPGEMGDRGPAGRDGLPGAKGLPGPPGRHIMIPFRIAQ
PHGQKGPGSNAPAELQAQLALTQARLALQGPPGPQGLSGMTGAAGDMGPAGIKGESGEPG
PMGQRGSRGPPGLDGVSGKTGRPGEDGLRGEPGPVGIKGDRGYDGLPGLPGPKGHRGETG
GVGPIGPPGVDGEQGEHGEPGPRGLPGEAGPRGELGHKGPPGVSGPPGPRGVHGQQGSKG
NLGPQGEPGPPGQQGAPGPQGISGPQGLMGPPGVKGPPGKSGLPGIPGADGVPGHPGNEG
PSGSKGSQGQFGPQGPQGYPGTRGVKGEGGVRGIKGNKGEKGLDGLAGFKGDMGPKGDGG
ISGAPGPRGEDGPDGPKGREGPRGEVGPVGLPGEKGKIGLPGILGYPGRSGIKGSLGKPG
KTGHTGLKGDRGLEGKRGQQGQRGPKGPRGKRGPRGSTGKSGPKGDRGQDGPQGPIGERG
PPGPRGASGYTGSKGPPGPPGKDGLPGHPGSRGETGFQGKTGPPGPAGVVGPQGPTGENG
PSGERGHPGPPGPIGEPGLSGSAGKEGSKGDRGPNGPPGKMGATGSPGFPGSRGPQGPVG
APGLKGNEGPPGPTGPAGVSGQRGPPGPSGQIGPLGRPGSSGPAGPPGENGSPGGPGGPG
PAGRDGLQGPVGLPGPPGSIGPRGEDGDKGEAGPPGSTGLKGGKGEHGPPGPPGEQGNSG
EPGPAGNDGEPGARGQQGLYGEKGDEGARGFPGPPGPRGLQGIPGTSGNKGDSGDAGPLG
PPGPPGQRGPPGVQGADGPLGPPGTYGQPGNVGDKGEPGNVGAPGIPGDSGPMGPNGEAG
QKGETGPSGPQGENGPKGPRGDDGPKGEPGPIGHPGDPGVAGIPGTMGDEGPPGDVGDTG
APGEPGPPGPIGEVGPSGGPGRRGPAGNPGTEGRSGEKGAKGEAGGIGPVGEPGAHGPQG
KHGKQGCTGLNAIAWPCRCTWVAW
Nucleotide sequence
Length: 5,541
>KH2012:KH.C13.116.v1.A.nonSL3-1
ATTTCTGAAATCACTTGCCGCTACAGGCGCGGCCCCGGAGTTGCGTTTTACGGTTTAGGA
AGCGGCATTGAAGTTGACGGGCGCGAAAGCGACCGCGAACTATTCGTTCAATTGTGAGCG
AAACAATGGGCACCAGCACATCGTCCATTGTTACGCCACAATGGGGCAAACAATCAGCAT
TAGCGGCGTGGCTGCTGTGCTGCATTAGCTTGGCTATAATTCCAAACGTACAAACGGCTC
GAATTGACTTGTTGGACAGATTTAAGATATCGACCAGTCTTGGGGTGTCTCCTGTTCCGG
GGAGTTGCGCCAATGCAAAGAAAAGGGCTGCACCAAGAACTGCCTTCAGGCTTTCTAGAA
ACACCCAGGCCATTGCTCTACCATCGGACTATGTCTTCAGCGAATTCGTTCGCGATGGCT
TCCCTCAAGAGTTCTCGATCACGGCAATTATCAAACCAAAAGTTGGGGTCAGGAATCCAT
TCCTGCTCCAAATGATGCACGCTGATCGGTGGAGACAACTTGGTTTTACTGTGGGAGAAG
AACCAGAGTTCCACTACAGAACAGACACAGACGTTCCACCTGACTATCCAACCTTCTCGA
GTGTCAATCTTGCTGATGGAAGATGGCACAAAGTTGCGTGGTCAGTTTACAACGAGAACG
TACAGTTGTGGGTGGATTGCGTCATGGTGACGGAGAAGATCGTTCGATCTGACGCGAACA
CACAACTCAACCTTGGAGGTGTGGTTTTGCTAGGAAAAGAACCCGGGACATCTGGAAATG
GATTTGTGGGAGACATAGAAAACCTATACTTCGACTCAGACCCGAGTGTAGCTGGCCAGA
TGTGTTTCCCAGCATCCAACCTATCTCCAAACTGTGGATCTACAGCAGCAGCCATCAGGG
AAGAACCAGAAACTGCTGTTTTCTCTGCAGCTGGCACCCCAAACCCAGAGGAATCTGAAG
GTTTAATAATTCCTGATTCATCTTTACCTGGTGAAAGGGATGGGGGAAGGGGAGATAATG
GAGATGGTGGAAGCAGGGGACAAAAAGGAGAGAAGGGAGAACAAGCTGTGATTGAACCTG
GGATTTTCATTCCTGGACCCCCCGGACCGCCTGGAGAACCTGGTCTCGACGGACCTCCTG
GATTCCAAGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGGGGTCTCGACGGACCTC
CTGGATTCCAAGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGGGGCCCTGCTGGTA
GAGATGGACTTCCTGGCGCCAAGGGGCTTCCTGGTCCGCCTGGTCGACACATCATGATAC
CATTCAGAATAGCTCAACCTCATGGACAGAAGGGACCAGGTTCGAACGCACCAGCTGAAC
TCCAGGCACAACTTGCTTTAACACAAGCTAGGCTTGCTCTACAAGGACCACCTGGACCAC
AGGGATTGTCAGGAATGACTGGAGCTGCTGGTGACATGGGACCTGCAGGCATTAAAGGCG
AAAGTGGTGAACCAGGACCTATGGGACAAAGGGGGTCACGTGGTCCCCCTGGTTTGGATG
GTGTGTCCGGCAAAACTGGAAGACCAGGAGAGGATGGTTTACGAGGTGAACCTGGACCTG
TTGGAATCAAGGGTGACAGAGGATATGATGGTCTTCCTGGCTTACCAGGACCAAAGGGGC
ACAGGGGTGAAACTGGCGGAGTTGGACCTATTGGACCACCAGGTGTCGATGGAGAGCAGG
GAGAACATGGTGAACCAGGACCTCGTGGATTGCCTGGCGAGGCGGGACCACGTGGAGAGT
TGGGACACAAGGGACCACCTGGTGTTTCTGGGCCTCCTGGACCAAGAGGTGTTCATGGGC
AACAAGGATCAAAAGGAAACTTGGGCCCACAAGGAGAGCCTGGTCCACCTGGACAACAAG
GAGCACCCGGGCCACAGGGTATATCTGGTCCCCAAGGGTTGATGGGTCCACCTGGAGTCA
AAGGACCCCCCGGGAAGTCTGGGTTACCCGGTATTCCTGGGGCTGATGGGGTTCCTGGTC
ACCCTGGTAACGAGGGCCCTAGTGGGTCAAAGGGGTCACAGGGTCAATTTGGACCACAAG
GGCCACAGGGTTATCCTGGTACCAGAGGTGTCAAAGGAGAAGGAGGAGTGAGAGGAATAA
AAGGAAACAAAGGAGAAAAAGGTCTCGATGGTTTAGCCGGTTTCAAAGGTGACATGGGAC
CTAAAGGAGATGGCGGGATTTCTGGCGCTCCAGGTCCACGCGGAGAAGATGGGCCAGATG
GCCCTAAGGGAAGAGAAGGTCCTCGTGGAGAAGTTGGCCCTGTTGGTTTGCCCGGTGAAA
AGGGAAAGATTGGTCTCCCTGGTATTCTGGGTTATCCTGGAAGATCTGGTATCAAGGGGT
CACTGGGCAAGCCTGGAAAAACTGGACATACTGGACTCAAGGGTGACCGGGGCTTGGAAG
GCAAGAGAGGTCAACAAGGTCAAAGGGGGCCAAAGGGTCCACGAGGCAAACGAGGTCCGA
GAGGATCTACTGGGAAATCTGGACCAAAGGGTGACAGAGGACAAGATGGACCGCAAGGAC
CAATCGGAGAAAGAGGCCCACCAGGACCCAGAGGAGCAAGTGGTTACACTGGCAGCAAGG
GACCCCCTGGCCCACCAGGAAAAGATGGTTTACCTGGACACCCTGGAAGTCGGGGTGAAA
CAGGTTTCCAAGGGAAGACTGGGCCCCCTGGACCTGCTGGTGTTGTAGGACCTCAAGGTC
CAACCGGTGAAAATGGACCATCAGGGGAGCGAGGACACCCGGGACCTCCTGGACCAATTG
GAGAACCTGGTTTGTCTGGATCTGCTGGAAAAGAGGGATCTAAGGGAGACAGAGGACCAA
ATGGACCCCCAGGAAAGATGGGTGCAACAGGTTCACCGGGTTTCCCAGGTTCAAGGGGAC
CACAAGGCCCTGTGGGTGCTCCAGGATTGAAGGGTAATGAAGGACCTCCTGGCCCCACTG
GACCAGCTGGCGTCAGTGGTCAACGCGGCCCTCCTGGTCCCTCTGGCCAAATTGGACCTC
TGGGTCGCCCAGGGTCAAGTGGGCCTGCTGGACCACCTGGTGAGAACGGAAGCCCCGGTG
GACCTGGAGGCCCAGGACCTGCTGGTAGAGATGGTCTACAAGGGCCTGTTGGTCTTCCTG
GTCCTCCTGGTTCCATTGGCCCAAGAGGAGAAGATGGGGACAAGGGTGAAGCTGGTCCAC
CAGGCTCCACAGGTTTGAAAGGCGGGAAAGGCGAACATGGGCCACCTGGACCTCCCGGTG
AACAAGGAAACAGTGGAGAACCTGGACCTGCTGGTAACGATGGTGAACCCGGGGCTCGGG
GTCAACAAGGTTTATATGGAGAGAAGGGTGATGAAGGGGCTAGGGGATTCCCCGGACCCC
CAGGACCCCGTGGCTTACAGGGTATTCCCGGAACTTCTGGCAACAAAGGTGACTCAGGAG
ATGCTGGACCTTTGGGACCACCTGGCCCTCCCGGACAACGAGGCCCCCCTGGTGTTCAAG
GTGCCGATGGACCTCTTGGCCCCCCTGGTACTTATGGACAACCTGGCAACGTTGGAGACA
AGGGTGAACCTGGTAATGTAGGAGCACCTGGTATTCCTGGAGATTCGGGCCCAATGGGAC
CAAACGGAGAAGCGGGACAAAAGGGTGAAACTGGGCCATCGGGACCACAAGGTGAAAATG
GACCAAAAGGACCTCGCGGAGATGATGGTCCTAAAGGAGAACCTGGACCCATCGGCCATC
CTGGAGACCCTGGTGTGGCTGGTATTCCTGGTACAATGGGAGACGAAGGACCACCGGGTG
ACGTTGGTGACACGGGAGCACCTGGAGAGCCGGGACCTCCTGGACCCATCGGTGAGGTTG
GACCTTCTGGTGGCCCCGGAAGACGGGGACCTGCCGGTAACCCTGGAACTGAAGGACGAT
CTGGAGAGAAAGGAGCTAAGGGTGAAGCTGGTGGTATTGGACCTGTAGGCGAACCTGGTG
CCCATGGACCTCAAGGTAAACATGGAAAACAAGGATGTACCGGTTTGAATGCTATTGCCT
GGCCCTGCAGGTGCACCTGGGTTGCCTGGTAACGCTGGAGCTGATGGCCCTGTTGGCCCA
ATGGGACCTACTGGTTTGAAAGGAATAAAGGGAGAAGTTGGCCCCGGTGGTGAAAAGGGT
CACCCTGGTTTGATCGGTTTGGTCGGACCCCCAGGTGAAGAGGGTGAGAAGGGTGAACGT
GGACCCCATGGTAGAGATGGACCCCCAGGGGTTAAGGGTGACGATGGAAGACCTGGCCCC
GCTGGCCCAATAGGGCCAATGGGACCACCTGGGTTACCGGGTGGAGTTGGAATGAAAGGA
AATAAGGGAAGCTTGGGACCCACCGGCCCCAAGGGAGATGAAGGTATCCAAGGGCCTCCT
GGCCCTCCTGGTCCACCCGGCGAAGTCTTCAACGCAGGAGCACTTAGAGCGCCGAGCTCA
ATCAAGGCTCGTGCAAGAAGGTCAGCTGAGGAGGAGACAGAAGGTGCCAGAGTGAAACGC
CAAGCTGTGTTTGAGGAGAACATGGTTGATGATTATCCACAAGGCTTGGAGGAAATCTTC
GGGATGATGGAATCAATTAAGATGGATCTGCAAATGTTGAAAGAACCAATGGGACGAACC
AGAGAAAATCCTGGCAGGACTTGTAAGGATATCTGGTACTGTCATCCAGACTTTGCTTCA
GGATTATACTGGATCGATCCGAACGGTGGGTGCTCGGCAGACGCCATTGAGGTCTGGTGT
GATTTTGAGGCAGAAGGAGACACTTGTCTCAATCCTCTCACGGTTACCATTCCAGCTCGA
AGGTGGCCTAAAGCTTCACCTGGAGATTGGTACAGCTCTTACAGGCTTGGGGAGAAGTTT
GATTACAACACCACCATCCCACAATACAACTTCCTGAGGTTGCTGTCGAGTCACGCTCGC
CAGAGATTCACATACAAGTGTGTCAACTCTATTGGATGGGAAGACCAACAGAACGATAAC
TTCAACAAAGCAATTCAACTTATGGGTTCAAATGAAGTTGTTTTCACTCATGGAAGTGAA
GAAGTAACAGTGTTGGAGGACTCTTGCAAGAGTGGACAGGGAACTGGACAAGTTGTGATT
GAGGTTCGAACCAAAGAATTAGAGATGTTGCCGTTGGTCGATTACAAGGCCTTCGATTTT
GGAACACGACCACAACGGCACGGCTATCATCTCGACCGTGCTTGTTTCAGTGGCTGAATG
TAATCATGTGTGTCTTCACGGGGCATTTATGATGGGTGGCACGCGCCACGGGATGTGTAC
GCCTCCTCTTAATGAAGTCGTGTACACTATGGAGAAGAAATGGGTACGCAAGTGCTGGTG
CATACCCATTTCTTCATCATCACATGACCTCTGTGGACCAATCAAATTCTTTGTGGGATT
CTAGACTGTGTGATGTCATCAGTATTACGTAATACCTCACTGTTGCTGCTGAGTTGCGTT
TTTGGCGGAAATACAAACTTT
| SMART |
Laminin_G (IPR001791) - T[55-249] 1.1E-15 - T[117-248] 3.3E-6 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[56-256] 1.19E-29 |
| Pfam |
Laminin_G (IPR001791) - T[172-247] 3.3E-8 |
| Pfam |
Collagen (IPR008160) - T[352-410] 4.5E-7 - T[449-505] 7.6E-9 - T[707-762] 1.1E-6 - T[1077-1133] 1.3E-9 - T[1107-1163] 2.3E-8 - T[1131-1188] 8.9E-8 - T[1272-1329] 1.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COBA2_HUMAN | 64.961 % | 576 | 5.2E-179 |
| COBA1_HUMAN | 54.943 % | 469 | 4.19E-140 |
| CO5A3_HUMAN | 59.144 % | 495 | 1.63E-149 |