- Transcript 'KH2012:KH.C1.250.v1....' >
- Transcript 'KH2012:KH.C10.27.v3....' >
- Transcript 'KH2012:KH.L153.31.v3...' >
- Clone 'cien114445' >
- Transcript 'KH2012:KH.C13.116.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.116.v1.A.nonSL4-1
Possible name(s)
COL11A2
Gene model
Location
KhC13 [1,601,679 / 1,630,881]
Amino acid sequence
Length: 1,344
>KH.C13.116.v1.A.nonSL4-1
RARKRPRTIRSIVSETMGTSTSSIVTPQWGKQSALAAWLLCCISLAIIPNVQTARIDLLD
RFKISTSLGVSPVPGSCANAKKRAAPRTAFRLSRNTQAIALPSDYVFSEFVRDGFPQEFS
ITAIIKPKVGVRNPFLLQMMHADRWRQLGFTVGEEPEFHYRTDTDVPPDYPTFSSVNLAD
GRWHKVAWSVYNENVQLWVDCVMVTEKIVRSDANTQLNLGGVVLLGKEPGTSGNGFVGDI
ENLYFDSDPSVAGQMCFPASNLSPNCGSTAAAIREEPETAVFSAAGTPNPEESEGLIIPD
SSLPGERDGGRGDNGDGGSRGQKGEKGEQAVIEPGIFIPGPPGPPGEPGLDGPPGFQGPP
GGPGEMGDRGLDGPPGFQGPPGGPGEMGDRGPAGRDGLPGAKGLPGPPGRHIMIPFRIAQ
PHGQKGPGSNAPAELQAQLALTQARLALQGPPGPQGLSGMTGAAGDMGPAGIKGESGEPG
PMGQRGSRGPPGLDGVSGKTGRPGEDGLRGEPGPVGIKGDRGYDGLPGLPGPKGHRGETG
GVGPIGPPGVDGEQGEHGEPGPRGLPGEAGPRGELGHKGPPGVSGPPGPRGVHGQQGSKG
NLGPQGEPGPPGQQGAPGPQGISGPQGLMGPPGVKGPPGKSGLPGIPGADGVPGHPGNEG
PSGSKGSQGQFGPQGPQGYPGTRGVKGEGGVRGIKGNKGEKGLDGLAGFKGDMGPKGDGG
ISGAPGPRGEDGPDGPKGREGPRGEVGPVGLPGEKGKIGLPGILGYPGRSGIKGSLGKPG
KTGHTGLKGDRGLEGKRGQQGQRGPKGPRGKRGPRGSTGKSGPKGDRGQDGPQGPIGERG
PPGPRGASGYTGSKGPPGPPGKDGLPGHPGSRGETGFQGKTGPPGPAGVVGPQGPTGENG
PSGERGHPGPPGPIGEPGLSGSAGKEGSKGDRGPNGPPGKMGATGSPGFPGSRGPQGPVG
APGLKGNEGPPGPTGPAGVSGQRGPPGPSGQIGPLGRPGSSGPAGPPGENGSPGGPGGPG
PAGRDGLQGPVGLPGPPGSIGPRGEDGDKGEAGPPGSTGLKGGKGEHGPPGPPGEQGNSG
EPGPAGNDGEPGARGQQGLYGEKGDEGARGFPGPPGPRGLQGIPGTSGNKGDSGDAGPLG
PPGPPGQRGPPGVQGADGPLGPPGTYGQPGNVGDKGEPGNVGAPGIPGDSGPMGPNGEAG
QKGETGPSGPQGENGPKGPRGDDGPKGEPGPIGHPGDPGVAGIPGTMGDEGPPGDVGDTG
APGEPGPPGPIGEVGPSGGPGRRGPAGNPGTEGRSGEKGAKGEAGGIGPVGEPGAHGPQG
KHGKQGCTGLNAIAWPCRCTWVAW
Nucleotide sequence
Length: 5,674
>KH2012:KH.C13.116.v1.A.nonSL4-1
AGCACAGTGGGGAACCATTCAAGCTTGAAGGAGTACGAGAATTCGCGAACAACCGCGATT
TCCGCTGTCTGGGCTATATGAGACAACTTTTTTCCTTCGGTCGGAATATTTTAACTTGTG
GCAAGGAACGGTCATTTCTGAAATCACTTGCCGCTACAGGCGCGGCCCCGGAGTTGCGTT
TTACGGTTTAGGAAGCGGCATTGAAGTTGACGGGCGCGAAAGCGACCGCGAACTATTCGT
TCAATTGTGAGCGAAACAATGGGCACCAGCACATCGTCCATTGTTACGCCACAATGGGGC
AAACAATCAGCATTAGCGGCGTGGCTGCTGTGCTGCATTAGCTTGGCTATAATTCCAAAC
GTACAAACGGCTCGAATTGACTTGTTGGACAGATTTAAGATATCGACCAGTCTTGGGGTG
TCTCCTGTTCCGGGGAGTTGCGCCAATGCAAAGAAAAGGGCTGCACCAAGAACTGCCTTC
AGGCTTTCTAGAAACACCCAGGCCATTGCTCTACCATCGGACTATGTCTTCAGCGAATTC
GTTCGCGATGGCTTCCCTCAAGAGTTCTCGATCACGGCAATTATCAAACCAAAAGTTGGG
GTCAGGAATCCATTCCTGCTCCAAATGATGCACGCTGATCGGTGGAGACAACTTGGTTTT
ACTGTGGGAGAAGAACCAGAGTTCCACTACAGAACAGACACAGACGTTCCACCTGACTAT
CCAACCTTCTCGAGTGTCAATCTTGCTGATGGAAGATGGCACAAAGTTGCGTGGTCAGTT
TACAACGAGAACGTACAGTTGTGGGTGGATTGCGTCATGGTGACGGAGAAGATCGTTCGA
TCTGACGCGAACACACAACTCAACCTTGGAGGTGTGGTTTTGCTAGGAAAAGAACCCGGG
ACATCTGGAAATGGATTTGTGGGAGACATAGAAAACCTATACTTCGACTCAGACCCGAGT
GTAGCTGGCCAGATGTGTTTCCCAGCATCCAACCTATCTCCAAACTGTGGATCTACAGCA
GCAGCCATCAGGGAAGAACCAGAAACTGCTGTTTTCTCTGCAGCTGGCACCCCAAACCCA
GAGGAATCTGAAGGTTTAATAATTCCTGATTCATCTTTACCTGGTGAAAGGGATGGGGGA
AGGGGAGATAATGGAGATGGTGGAAGCAGGGGACAAAAAGGAGAGAAGGGAGAACAAGCT
GTGATTGAACCTGGGATTTTCATTCCTGGACCCCCCGGACCGCCTGGAGAACCTGGTCTC
GACGGACCTCCTGGATTCCAAGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGGGGT
CTCGACGGACCTCCTGGATTCCAAGGACCACCGGGTGGCCCCGGAGAGATGGGAGATCGG
GGCCCTGCTGGTAGAGATGGACTTCCTGGCGCCAAGGGGCTTCCTGGTCCGCCTGGTCGA
CACATCATGATACCATTCAGAATAGCTCAACCTCATGGACAGAAGGGACCAGGTTCGAAC
GCACCAGCTGAACTCCAGGCACAACTTGCTTTAACACAAGCTAGGCTTGCTCTACAAGGA
CCACCTGGACCACAGGGATTGTCAGGAATGACTGGAGCTGCTGGTGACATGGGACCTGCA
GGCATTAAAGGCGAAAGTGGTGAACCAGGACCTATGGGACAAAGGGGGTCACGTGGTCCC
CCTGGTTTGGATGGTGTGTCCGGCAAAACTGGAAGACCAGGAGAGGATGGTTTACGAGGT
GAACCTGGACCTGTTGGAATCAAGGGTGACAGAGGATATGATGGTCTTCCTGGCTTACCA
GGACCAAAGGGGCACAGGGGTGAAACTGGCGGAGTTGGACCTATTGGACCACCAGGTGTC
GATGGAGAGCAGGGAGAACATGGTGAACCAGGACCTCGTGGATTGCCTGGCGAGGCGGGA
CCACGTGGAGAGTTGGGACACAAGGGACCACCTGGTGTTTCTGGGCCTCCTGGACCAAGA
GGTGTTCATGGGCAACAAGGATCAAAAGGAAACTTGGGCCCACAAGGAGAGCCTGGTCCA
CCTGGACAACAAGGAGCACCCGGGCCACAGGGTATATCTGGTCCCCAAGGGTTGATGGGT
CCACCTGGAGTCAAAGGACCCCCCGGGAAGTCTGGGTTACCCGGTATTCCTGGGGCTGAT
GGGGTTCCTGGTCACCCTGGTAACGAGGGCCCTAGTGGGTCAAAGGGGTCACAGGGTCAA
TTTGGACCACAAGGGCCACAGGGTTATCCTGGTACCAGAGGTGTCAAAGGAGAAGGAGGA
GTGAGAGGAATAAAAGGAAACAAAGGAGAAAAAGGTCTCGATGGTTTAGCCGGTTTCAAA
GGTGACATGGGACCTAAAGGAGATGGCGGGATTTCTGGCGCTCCAGGTCCACGCGGAGAA
GATGGGCCAGATGGCCCTAAGGGAAGAGAAGGTCCTCGTGGAGAAGTTGGCCCTGTTGGT
TTGCCCGGTGAAAAGGGAAAGATTGGTCTCCCTGGTATTCTGGGTTATCCTGGAAGATCT
GGTATCAAGGGGTCACTGGGCAAGCCTGGAAAAACTGGACATACTGGACTCAAGGGTGAC
CGGGGCTTGGAAGGCAAGAGAGGTCAACAAGGTCAAAGGGGGCCAAAGGGTCCACGAGGC
AAACGAGGTCCGAGAGGATCTACTGGGAAATCTGGACCAAAGGGTGACAGAGGACAAGAT
GGACCGCAAGGACCAATCGGAGAAAGAGGCCCACCAGGACCCAGAGGAGCAAGTGGTTAC
ACTGGCAGCAAGGGACCCCCTGGCCCACCAGGAAAAGATGGTTTACCTGGACACCCTGGA
AGTCGGGGTGAAACAGGTTTCCAAGGGAAGACTGGGCCCCCTGGACCTGCTGGTGTTGTA
GGACCTCAAGGTCCAACCGGTGAAAATGGACCATCAGGGGAGCGAGGACACCCGGGACCT
CCTGGACCAATTGGAGAACCTGGTTTGTCTGGATCTGCTGGAAAAGAGGGATCTAAGGGA
GACAGAGGACCAAATGGACCCCCAGGAAAGATGGGTGCAACAGGTTCACCGGGTTTCCCA
GGTTCAAGGGGACCACAAGGCCCTGTGGGTGCTCCAGGATTGAAGGGTAATGAAGGACCT
CCTGGCCCCACTGGACCAGCTGGCGTCAGTGGTCAACGCGGCCCTCCTGGTCCCTCTGGC
CAAATTGGACCTCTGGGTCGCCCAGGGTCAAGTGGGCCTGCTGGACCACCTGGTGAGAAC
GGAAGCCCCGGTGGACCTGGAGGCCCAGGACCTGCTGGTAGAGATGGTCTACAAGGGCCT
GTTGGTCTTCCTGGTCCTCCTGGTTCCATTGGCCCAAGAGGAGAAGATGGGGACAAGGGT
GAAGCTGGTCCACCAGGCTCCACAGGTTTGAAAGGCGGGAAAGGCGAACATGGGCCACCT
GGACCTCCCGGTGAACAAGGAAACAGTGGAGAACCTGGACCTGCTGGTAACGATGGTGAA
CCCGGGGCTCGGGGTCAACAAGGTTTATATGGAGAGAAGGGTGATGAAGGGGCTAGGGGA
TTCCCCGGACCCCCAGGACCCCGTGGCTTACAGGGTATTCCCGGAACTTCTGGCAACAAA
GGTGACTCAGGAGATGCTGGACCTTTGGGACCACCTGGCCCTCCCGGACAACGAGGCCCC
CCTGGTGTTCAAGGTGCCGATGGACCTCTTGGCCCCCCTGGTACTTATGGACAACCTGGC
AACGTTGGAGACAAGGGTGAACCTGGTAATGTAGGAGCACCTGGTATTCCTGGAGATTCG
GGCCCAATGGGACCAAACGGAGAAGCGGGACAAAAGGGTGAAACTGGGCCATCGGGACCA
CAAGGTGAAAATGGACCAAAAGGACCTCGCGGAGATGATGGTCCTAAAGGAGAACCTGGA
CCCATCGGCCATCCTGGAGACCCTGGTGTGGCTGGTATTCCTGGTACAATGGGAGACGAA
GGACCACCGGGTGACGTTGGTGACACGGGAGCACCTGGAGAGCCGGGACCTCCTGGACCC
ATCGGTGAGGTTGGACCTTCTGGTGGCCCCGGAAGACGGGGACCTGCCGGTAACCCTGGA
ACTGAAGGACGATCTGGAGAGAAAGGAGCTAAGGGTGAAGCTGGTGGTATTGGACCTGTA
GGCGAACCTGGTGCCCATGGACCTCAAGGTAAACATGGAAAACAAGGATGTACCGGTTTG
AATGCTATTGCCTGGCCCTGCAGGTGCACCTGGGTTGCCTGGTAACGCTGGAGCTGATGG
CCCTGTTGGCCCAATGGGACCTACTGGTTTGAAAGGAATAAAGGGAGAAGTTGGCCCCGG
TGGTGAAAAGGGTCACCCTGGTTTGATCGGTTTGGTCGGACCCCCAGGTGAAGAGGGTGA
GAAGGGTGAACGTGGACCCCATGGTAGAGATGGACCCCCAGGGGTTAAGGGTGACGATGG
AAGACCTGGCCCCGCTGGCCCAATAGGGCCAATGGGACCACCTGGGTTACCGGGTGGAGT
TGGAATGAAAGGAAATAAGGGAAGCTTGGGACCCACCGGCCCCAAGGGAGATGAAGGTAT
CCAAGGGCCTCCTGGCCCTCCTGGTCCACCCGGCGAAGTCTTCAACGCAGGAGCACTTAG
AGCGCCGAGCTCAATCAAGGCTCGTGCAAGAAGGTCAGCTGAGGAGGAGACAGAAGGTGC
CAGAGTGAAACGCCAAGCTGTGTTTGAGGAGAACATGGTTGATGATTATCCACAAGGCTT
GGAGGAAATCTTCGGGATGATGGAATCAATTAAGATGGATCTGCAAATGTTGAAAGAACC
AATGGGACGAACCAGAGAAAATCCTGGCAGGACTTGTAAGGATATCTGGTACTGTCATCC
AGACTTTGCTTCAGGATTATACTGGATCGATCCGAACGGTGGGTGCTCGGCAGACGCCAT
TGAGGTCTGGTGTGATTTTGAGGCAGAAGGAGACACTTGTCTCAATCCTCTCACGGTTAC
CATTCCAGCTCGAAGGTGGCCTAAAGCTTCACCTGGAGATTGGTACAGCTCTTACAGGCT
TGGGGAGAAGTTTGATTACAACACCACCATCCCACAATACAACTTCCTGAGGTTGCTGTC
GAGTCACGCTCGCCAGAGATTCACATACAAGTGTGTCAACTCTATTGGATGGGAAGACCA
ACAGAACGATAACTTCAACAAAGCAATTCAACTTATGGGTTCAAATGAAGTTGTTTTCAC
TCATGGAAGTGAAGAAGTAACAGTGTTGGAGGACTCTTGCAAGAGTGGACAGGGAACTGG
ACAAGTTGTGATTGAGGTTCGAACCAAAGAATTAGAGATGTTGCCGTTGGTCGATTACAA
GGCCTTCGATTTTGGAACACGACCACAACGGCACGGCTATCATCTCGACCGTGCTTGTTT
CAGTGGCTGAATGTAATCATGTGTGTCTTCACGGGGCATTTATGATGGGTGGCACGCGCC
ACGGGATGTGTACGCCTCCTCTTAATGAAGTCGTGTACACTATGGAGAAGAAATGGGTAC
GCAAGTGCTGGTGCATACCCATTTCTTCATCATCACATGACCTCTGTGGACCAATCAAAT
TCTTTGTGGGATTCTAGACTGTGTGATGTCATCAGTATTACGTAATACCTCACTGTTGCT
GCTGAGTTGCGTTTTTGGCGGAAATACAAACTTT
| SMART |
Laminin_G (IPR001791) - T[55-249] 1.1E-15 - T[117-248] 3.3E-6 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[56-256] 1.19E-29 |
| Pfam |
Laminin_G (IPR001791) - T[172-247] 3.3E-8 |
| Pfam |
Collagen (IPR008160) - T[352-410] 4.5E-7 - T[449-505] 7.6E-9 - T[707-762] 1.1E-6 - T[1077-1133] 1.3E-9 - T[1107-1163] 2.3E-8 - T[1131-1188] 8.9E-8 - T[1272-1329] 1.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COBA2_HUMAN | 64.961 % | 576 | 5.2E-179 |
| COBA1_HUMAN | 54.943 % | 469 | 4.19E-140 |
| CO5A3_HUMAN | 59.144 % | 495 | 1.63E-149 |