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  1. Transcript 'KH2012:KH.C13.130.v1...'

Transcript Model

Transcript Id

KH2012:KH.C13.130.v1.C.nonSL1-1

Possible name(s)

MAP1LC3A; MAP1LC3B; MAP1LC3C

Gene model

KH2012:KH.C13.130

Location

KhC13 [108,807 / 112,221]

Sequences

Amino acid sequence

Length: 75

>KH.C13.130.v1.C.nonSL1-1
AWGVNTPWSLVNMTMSQFATIIRNRMSVGSSQAVYLTVDSRHMPGMALTMAEIYNDNLDE
DGFLYMTYASQEMFG

Nucleotide sequence

Length: 804

>KH2012:KH.C13.130.v1.C.nonSL1-1
AAACTGTGCAGATCAGCAGAAAGGTTCGTTTGGGTATTGTAGTTGATAGTTATGTCGCGT
CTAGAAAAGCAGAACCAAGCGGGGAAGAGACATTTTAAAGAGACAAAATCACTTGCAACT
AGAAAAGCAGAAGTTCATTCTATAAGAGACAAGTTTCCGACCAAAATACCATAAACATGA
TACTTATTGCAACTTTCACCATTACGTGATTGTTGAACGCTACAAAAAGGAGACAATGTT
ATACCTTTACTTGAGCATGGGGTGTAAATACACCATGGTCCCTGGTGAATATGACAATGA
GTCAATTTGCGACGATAATAAGAAATCGTATGTCGGTCGGTTCCTCCCAGGCCGTCTACC
TGACCGTTGATAGTCGCCACATGCCAGGAATGGCGCTTACGATGGCGGAAATATACAACG
ATAACTTGGACGAGGACGGATTCTTATATATGACGTACGCTTCCCAAGAGATGTTCGGCT
GATAAGTTGAGAAGACGTACTGCTGCAAGAAATATCTTTGGTTGTACCGTTATATTTTAC
ACTTAAATCAAAGTATTTAGTTTGATAAGATTCAAACCGAAAGCGATCCTTTATGTCAGC
TGCACTTCGTACGTTTTATTTTGCAATACTTGCCGTTATATTGGTTACTAACAATAGCGA
ACTCTCCTGTCTGTATTCATATATTGCTACACATAGTACTTGCCTTTAGTTAACTGTGAA
ATAAATCAATGAGCTTATTTTCTATATTACGCCTTGGAAAACTTTATGCAATTGCTACTT
GTAAATAAAATAAGCTAATGAAAA

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[12-75] 4.65E-18
Pfam
Atg8-like (IPR004241) - T[12-75] 5.4E-18
PANTHER
Atg8-like (IPR004241) - T[12-75] 6.6E-26
PANTHER
MAP1A/MAP1B_LC3C (IPR027731) - T[12-75] 6.6E-26

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MLP3C_HUMAN 56.25 % 80.5 3.12E-21





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