- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Cisavi.CG.ENS81.R22....' >
- Transcript 'Boleac.CG.SB_v3.S52....' >
- Transcript 'KH2012:KH.C11.102.v2...' >
- Transcript 'KH2012:KH.C13.134.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.134.v1.A.nonSL4-1
Possible name(s)
HMCN1; SSPO; THBS1
Gene model
Location
KhC13 [1,192,821 / 1,203,635]
Amino acid sequence
Length: 1,066
>KH.C13.134.v1.A.nonSL4-1
SLRKMFVPIRIVVLACLAMPVTCFAVSLDSWSTWSSCSVTCGSGVATRRWKCSGINCEQK
VETKECFPEFCPSYLSWPRIHFGGTLVMDANTINNKRCNYQNEYFSNIAAKIKEKSISVV
NDKYTHYMFRINNWNPDGSGHVYFMNSTVKSICTGPSQCSTTDTIVGSVFKEITRGQLAT
IDPDWQVTVEVWGLTVQIPGVLKGRLRPGSVQQEGGRVMHANKKIKGYAIGGLGRFKTKV
ENITWESSHYKSMFNNAEELSMIYVIDLFNQFSFSCRMVGTLGLTSPDDPNEITAGRMLK
STIHAIPTPFFVNYKKKVITMDFSGSFHGKMNGHINSQGVDLAIKINCRYPLIYPPNVCP
HGHHKVGSTTVYYITRNGDLSSKYFGTNMDWYFKYGGIVDVDISHLSLRWRNLIKFHELI
LLRAGRGFETIIAKEYMKGITIGVSNQLAMRLNNGQTKKYIAYASRFNKPMPGVEMKFTN
VPMNATTDCNRPDTCKLPLSLPADVIHTSSNTSLTNYEGKMIFNISALKSPGNPRGCGLD
GQLYILMLEMSCTIGGYKYTFKNGQFGGTLLHKMVHPSEFVLTLAPLVRIYNEVEVKECP
TWQDIKGILTQYYNLYPVMSKNGIINLHNYMEVKQKSQLIRIAMFQTDFEDPKYMPASRD
LSLSKQKLIWNWMQCGMKYGNETEDKDVCHPSVVGENMKKLKLYLQKAVNLELTTIPPYF
TAWLSLQTEYARNLKVARQIKSIYTEEMLHMSIAANILNSIGGTVNLTNIEEIPIYPTKL
GSGSFFELAPGLQVTLQKFSKGLIKDIFMEIELPSPDRDRKDFKQIVGLWKRLPVQGSGG
TISTNMDQLLQEFEGEVVDESYDDNQETLGATEKLQLQRKWERVKNHASKMLKISPYGIN
TIGSLYTKITLFLTALESCAKIDGLNNIGPGTIFVGDPIKQLNMSYWYNPAMVSDLKTVS
KFWSSEMSKEELVLNERQTSFKIKRVERDSFPPGSDLVSPLFPITDLKSAIQGVVEIIYQ
GEGGSPCSPFKSTKPGGTLSLQTSHYVRFMEIVHGRTLGSNEKTIG
Nucleotide sequence
Length: 4,081
>KH2012:KH.C13.134.v1.A.nonSL4-1
AGTTTGAGGAAAATGTTTGTACCGATCAGGATTGTTGTGTTGGCCTGCCTTGCAATGCCA
GTGACTTGCTTCGCAGTCTCATTGGACAGTTGGAGCACGTGGTCATCCTGCAGTGTGACG
TGTGGTTCGGGGGTTGCCACTCGCCGTTGGAAATGTTCAGGAATAAACTGCGAGCAAAAA
GTCGAAACCAAAGAATGTTTTCCAGAATTTTGCCCAAGCTACCTCTCTTGGCCAAGGATA
CACTTTGGCGGTACACTTGTAATGGACGCGAACACGATAAATAATAAAAGATGCAACTAC
CAGAACGAATACTTTTCCAATATAGCGGCCAAGATTAAGGAAAAGTCAATTAGTGTTGTT
AATGACAAATACACACATTACATGTTCCGTATTAATAACTGGAATCCTGATGGCAGTGGA
CACGTCTATTTCATGAACTCAACGGTCAAATCCATTTGTACAGGTCCATCACAATGCTCT
ACTACTGATACTATTGTTGGATCTGTGTTTAAAGAGATTACTAGAGGCCAGCTTGCCACA
ATTGATCCAGACTGGCAAGTAACTGTAGAAGTATGGGGGTTAACAGTTCAAATCCCTGGT
GTGCTAAAAGGAAGGTTGCGACCAGGATCTGTGCAGCAGGAGGGTGGCCGCGTTATGCAT
GCTAACAAGAAGATCAAGGGTTATGCTATTGGTGGCCTAGGAAGGTTTAAAACAAAAGTT
GAAAATATAACATGGGAAAGTTCACATTACAAGTCTATGTTCAACAATGCTGAGGAACTA
TCAATGATTTATGTCATTGATCTCTTTAATCAATTCTCATTCTCATGCAGAATGGTGGGG
ACATTGGGTTTAACTTCTCCTGATGACCCAAATGAAATAACAGCTGGACGAATGTTGAAG
TCAACAATACACGCGATACCAACTCCTTTCTTTGTTAATTATAAGAAGAAGGTAATTACC
ATGGACTTCAGTGGTTCTTTTCATGGCAAAATGAACGGCCACATAAACTCACAAGGGGTG
GATCTTGCTATAAAGATTAACTGCAGATACCCACTCATATACCCCCCTAATGTGTGCCCA
CACGGTCACCATAAAGTGGGATCAACCACTGTGTATTACATCACGCGCAATGGCGACTTA
TCTTCCAAATACTTTGGGACAAACATGGATTGGTATTTTAAATACGGTGGAATAGTTGAC
GTGGATATTTCTCATTTGTCTTTAAGATGGAGAAACTTGATTAAATTTCACGAACTTATT
CTGCTGAGAGCTGGCCGGGGGTTTGAAACAATAATTGCAAAGGAATACATGAAAGGGATC
ACCATTGGTGTTTCAAACCAACTTGCTATGCGATTAAACAATGGCCAGACCAAGAAATAT
ATCGCTTATGCTTCAAGGTTTAATAAACCAATGCCAGGAGTTGAGATGAAGTTTACAAAT
GTTCCAATGAATGCAACAACTGACTGTAATAGACCTGATACATGTAAATTACCACTGTCC
CTTCCTGCTGATGTAATCCACACATCTTCCAACACCAGCCTTACCAACTACGAAGGAAAA
ATGATCTTCAATATTTCTGCATTAAAATCACCAGGCAATCCTCGAGGGTGTGGATTAGAT
GGGCAGTTATATATTCTTATGCTGGAGATGTCGTGCACAATAGGCGGGTATAAATATACT
TTTAAGAATGGACAGTTTGGAGGAACACTTCTTCATAAGATGGTTCATCCTTCGGAATTT
GTATTGACACTTGCTCCATTAGTGAGGATTTATAATGAAGTAGAAGTGAAGGAATGTCCA
ACGTGGCAAGATATTAAAGGCATCCTCACCCAGTATTATAACTTATACCCCGTAATGTCA
AAGAATGGGATAATCAATCTACATAATTATATGGAAGTGAAACAGAAGTCACAACTTATA
AGAATTGCTATGTTTCAAACTGACTTTGAAGACCCAAAATACATGCCAGCTTCACGTGAT
TTATCGCTGAGTAAGCAGAAATTAATCTGGAACTGGATGCAATGTGGGATGAAGTATGGG
AATGAAACTGAAGATAAAGATGTCTGTCACCCCTCTGTTGTCGGTGAGAATATGAAAAAG
TTGAAGCTGTATTTACAAAAAGCAGTTAACCTCGAGCTAACCACAATCCCCCCATACTTC
ACTGCATGGTTAAGTTTACAAACTGAATATGCAAGGAATCTAAAAGTAGCAAGACAAATA
AAGTCAATCTACACCGAAGAGATGTTGCATATGTCTATTGCTGCCAATATTCTTAACTCA
ATAGGAGGAACAGTGAACCTCACCAACATAGAAGAGATTCCAATCTACCCAACCAAGCTT
GGCAGTGGTTCCTTTTTTGAACTTGCACCCGGTTTGCAAGTCACGCTACAGAAGTTCTCC
AAGGGCCTAATAAAGGATATTTTCATGGAGATTGAGCTTCCATCACCTGATAGAGACAGA
AAGGACTTTAAACAAATAGTTGGTTTATGGAAGAGACTGCCAGTGCAGGGTAGTGGGGGA
ACTATATCTACTAATATGGATCAACTGTTGCAAGAATTCGAGGGAGAAGTTGTTGATGAA
AGTTATGACGACAACCAAGAAACTTTGGGCGCCACTGAAAAGTTACAACTGCAGAGGAAA
TGGGAAAGAGTAAAAAACCATGCGAGTAAAATGTTAAAGATATCTCCATATGGTATAAAC
ACTATTGGATCTTTGTACACAAAAATAACATTGTTTCTAACTGCTTTGGAGTCATGCGCT
AAAATTGATGGGTTAAACAATATTGGGCCTGGAACTATATTTGTAGGCGATCCAATTAAA
CAGTTGAATATGTCATATTGGTATAATCCCGCGATGGTCAGTGATTTGAAAACTGTGTCT
AAGTTTTGGAGTTCTGAGATGTCAAAAGAAGAACTCGTTCTCAACGAAAGACAAACAAGT
TTCAAGATCAAGAGAGTTGAGCGAGATTCTTTTCCTCCAGGATCAGATCTTGTCTCTCCT
CTTTTCCCCATCACTGATCTTAAGTCTGCCATTCAAGGGGTTGTTGAGATCATTTATCAG
GGTGAAGGGGGAAGTCCATGTTCACCCTTCAAGTCAACCAAGCCTGGTGGGACTCTGTCA
CTCCAGACTTCTCATTATGTGAGGTTCATGGAAATTGTACATGGTCGGACGTTGGGTTCA
AATGAAAAGACCATCGGTTGACAGTGGGATATCATGTTTGAACCTCACACTTTTCGACTG
TCCAAACAAACTCAAAAGTGATGAAGCTTTCTGCTTTGCAGGGGATGAAATAGCTTTTTA
TGAAGATGGTGTATGGCCAATAGTAAGCAACCCCACACCAACCATGTACAAACCAGGGAC
AGATGCTCACCATTTTAACCATCAGTTTAATATTCAATACACAAGATTACTTTTCTGTTT
AGAATCTGCATTTGGTGGAAACCCGTCTAAAATGCGGTCATGCATGAGCTACATGTACGA
CCTGATAATCACGGGCAAACGATTGGTCAGATCACCAGTGGGTGTCACTAAAGATACATT
TATTACGCAACCAACTTGCTCAAACTGCCACGCTTCTCCTACTTGGGATTTTATTCGTGA
CAAGTCAGAACGAAGTGGATTCCCTTTGATTATAGGATGATATAATGTAATTGTATTTAT
TATATTGGTACATTATCAAAAAAACCTGTTTTAATATATAGGTTCAATACCTGAAACACC
TATCTACTAAAGTTAAGTTTAGCACATCATTCTGTATGTAGATTGTTGCATACGTTGTTA
TTGTGTTAAATTTCTTCCTATTAGTGCACCAATACCATAGATTTTATGACATGGCTATTA
TTTTTAAACTTTACTAAACTTTTGCCAAAACTTGTATAAACTAAAATGTTTCGCAGCCTA
CTTCATTTGTTGTCTGGTGTTATTTTAGCATTGTATATTTGTTTTTTTTATTGATATATA
CACCAACTTTCTGCCCAAACCACATAAAAACCAAAACCCACATTGCCAAGACTACCCTTG
TTATTACTTTTAAATGAGAAAAAATGTTGGGAAATGGAAACACAAAAGTAAAAAGAAAAA
A
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[14-76] 2.1E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[25-72] 9.262 |
| SMART |
TSP1_rpt (IPR000884) - T[28-72] 1.2E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[29-71] 2.09E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[31-66] 1.9E-5 |
| Gene3D |
Ferritin-like (IPR012347) - T[695-867] 1.3E-29 |
| SUPERFAMILY |
Ferritin-like_SF (IPR009078) - T[703-774] 6.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|