- Transcript 'KH2012:KH.C5.353.v1....' >
- Transcript 'KH2012:KH.L126.13.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S10...' >
- Transcript 'KH2012:KH.C13.134.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.134.v1.A.SL3-1
Possible name(s)
HMCN1; SSPO; THBS1
Gene model
Location
KhC13 [1,192,812 / 1,203,635]
Amino acid sequence
Length: 1,069
>KH.C13.134.v1.A.SL3-1
FGFSLRKMFVPIRIVVLACLAMPVTCFAVSLDSWSTWSSCSVTCGSGVATRRWKCSGINC
EQKVETKECFPEFCPSYLSWPRIHFGGTLVMDANTINNKRCNYQNEYFSNIAAKIKEKSI
SVVNDKYTHYMFRINNWNPDGSGHVYFMNSTVKSICTGPSQCSTTDTIVGSVFKEITRGQ
LATIDPDWQVTVEVWGLTVQIPGVLKGRLRPGSVQQEGGRVMHANKKIKGYAIGGLGRFK
TKVENITWESSHYKSMFNNAEELSMIYVIDLFNQFSFSCRMVGTLGLTSPDDPNEITAGR
MLKSTIHAIPTPFFVNYKKKVITMDFSGSFHGKMNGHINSQGVDLAIKINCRYPLIYPPN
VCPHGHHKVGSTTVYYITRNGDLSSKYFGTNMDWYFKYGGIVDVDISHLSLRWRNLIKFH
ELILLRAGRGFETIIAKEYMKGITIGVSNQLAMRLNNGQTKKYIAYASRFNKPMPGVEMK
FTNVPMNATTDCNRPDTCKLPLSLPADVIHTSSNTSLTNYEGKMIFNISALKSPGNPRGC
GLDGQLYILMLEMSCTIGGYKYTFKNGQFGGTLLHKMVHPSEFVLTLAPLVRIYNEVEVK
ECPTWQDIKGILTQYYNLYPVMSKNGIINLHNYMEVKQKSQLIRIAMFQTDFEDPKYMPA
SRDLSLSKQKLIWNWMQCGMKYGNETEDKDVCHPSVVGENMKKLKLYLQKAVNLELTTIP
PYFTAWLSLQTEYARNLKVARQIKSIYTEEMLHMSIAANILNSIGGTVNLTNIEEIPIYP
TKLGSGSFFELAPGLQVTLQKFSKGLIKDIFMEIELPSPDRDRKDFKQIVGLWKRLPVQG
SGGTISTNMDQLLQEFEGEVVDESYDDNQETLGATEKLQLQRKWERVKNHASKMLKISPY
GINTIGSLYTKITLFLTALESCAKIDGLNNIGPGTIFVGDPIKQLNMSYWYNPAMVSDLK
TVSKFWSSEMSKEELVLNERQTSFKIKRVERDSFPPGSDLVSPLFPITDLKSAIQGVVEI
IYQGEGGSPCSPFKSTKPGGTLSLQTSHYVRFMEIVHGRTLGSNEKTIG
Nucleotide sequence
Length: 4,090
>KH2012:KH.C13.134.v1.A.SL3-1
TTTGGTTTTAGTTTGAGGAAAATGTTTGTACCGATCAGGATTGTTGTGTTGGCCTGCCTT
GCAATGCCAGTGACTTGCTTCGCAGTCTCATTGGACAGTTGGAGCACGTGGTCATCCTGC
AGTGTGACGTGTGGTTCGGGGGTTGCCACTCGCCGTTGGAAATGTTCAGGAATAAACTGC
GAGCAAAAAGTCGAAACCAAAGAATGTTTTCCAGAATTTTGCCCAAGCTACCTCTCTTGG
CCAAGGATACACTTTGGCGGTACACTTGTAATGGACGCGAACACGATAAATAATAAAAGA
TGCAACTACCAGAACGAATACTTTTCCAATATAGCGGCCAAGATTAAGGAAAAGTCAATT
AGTGTTGTTAATGACAAATACACACATTACATGTTCCGTATTAATAACTGGAATCCTGAT
GGCAGTGGACACGTCTATTTCATGAACTCAACGGTCAAATCCATTTGTACAGGTCCATCA
CAATGCTCTACTACTGATACTATTGTTGGATCTGTGTTTAAAGAGATTACTAGAGGCCAG
CTTGCCACAATTGATCCAGACTGGCAAGTAACTGTAGAAGTATGGGGGTTAACAGTTCAA
ATCCCTGGTGTGCTAAAAGGAAGGTTGCGACCAGGATCTGTGCAGCAGGAGGGTGGCCGC
GTTATGCATGCTAACAAGAAGATCAAGGGTTATGCTATTGGTGGCCTAGGAAGGTTTAAA
ACAAAAGTTGAAAATATAACATGGGAAAGTTCACATTACAAGTCTATGTTCAACAATGCT
GAGGAACTATCAATGATTTATGTCATTGATCTCTTTAATCAATTCTCATTCTCATGCAGA
ATGGTGGGGACATTGGGTTTAACTTCTCCTGATGACCCAAATGAAATAACAGCTGGACGA
ATGTTGAAGTCAACAATACACGCGATACCAACTCCTTTCTTTGTTAATTATAAGAAGAAG
GTAATTACCATGGACTTCAGTGGTTCTTTTCATGGCAAAATGAACGGCCACATAAACTCA
CAAGGGGTGGATCTTGCTATAAAGATTAACTGCAGATACCCACTCATATACCCCCCTAAT
GTGTGCCCACACGGTCACCATAAAGTGGGATCAACCACTGTGTATTACATCACGCGCAAT
GGCGACTTATCTTCCAAATACTTTGGGACAAACATGGATTGGTATTTTAAATACGGTGGA
ATAGTTGACGTGGATATTTCTCATTTGTCTTTAAGATGGAGAAACTTGATTAAATTTCAC
GAACTTATTCTGCTGAGAGCTGGCCGGGGGTTTGAAACAATAATTGCAAAGGAATACATG
AAAGGGATCACCATTGGTGTTTCAAACCAACTTGCTATGCGATTAAACAATGGCCAGACC
AAGAAATATATCGCTTATGCTTCAAGGTTTAATAAACCAATGCCAGGAGTTGAGATGAAG
TTTACAAATGTTCCAATGAATGCAACAACTGACTGTAATAGACCTGATACATGTAAATTA
CCACTGTCCCTTCCTGCTGATGTAATCCACACATCTTCCAACACCAGCCTTACCAACTAC
GAAGGAAAAATGATCTTCAATATTTCTGCATTAAAATCACCAGGCAATCCTCGAGGGTGT
GGATTAGATGGGCAGTTATATATTCTTATGCTGGAGATGTCGTGCACAATAGGCGGGTAT
AAATATACTTTTAAGAATGGACAGTTTGGAGGAACACTTCTTCATAAGATGGTTCATCCT
TCGGAATTTGTATTGACACTTGCTCCATTAGTGAGGATTTATAATGAAGTAGAAGTGAAG
GAATGTCCAACGTGGCAAGATATTAAAGGCATCCTCACCCAGTATTATAACTTATACCCC
GTAATGTCAAAGAATGGGATAATCAATCTACATAATTATATGGAAGTGAAACAGAAGTCA
CAACTTATAAGAATTGCTATGTTTCAAACTGACTTTGAAGACCCAAAATACATGCCAGCT
TCACGTGATTTATCGCTGAGTAAGCAGAAATTAATCTGGAACTGGATGCAATGTGGGATG
AAGTATGGGAATGAAACTGAAGATAAAGATGTCTGTCACCCCTCTGTTGTCGGTGAGAAT
ATGAAAAAGTTGAAGCTGTATTTACAAAAAGCAGTTAACCTCGAGCTAACCACAATCCCC
CCATACTTCACTGCATGGTTAAGTTTACAAACTGAATATGCAAGGAATCTAAAAGTAGCA
AGACAAATAAAGTCAATCTACACCGAAGAGATGTTGCATATGTCTATTGCTGCCAATATT
CTTAACTCAATAGGAGGAACAGTGAACCTCACCAACATAGAAGAGATTCCAATCTACCCA
ACCAAGCTTGGCAGTGGTTCCTTTTTTGAACTTGCACCCGGTTTGCAAGTCACGCTACAG
AAGTTCTCCAAGGGCCTAATAAAGGATATTTTCATGGAGATTGAGCTTCCATCACCTGAT
AGAGACAGAAAGGACTTTAAACAAATAGTTGGTTTATGGAAGAGACTGCCAGTGCAGGGT
AGTGGGGGAACTATATCTACTAATATGGATCAACTGTTGCAAGAATTCGAGGGAGAAGTT
GTTGATGAAAGTTATGACGACAACCAAGAAACTTTGGGCGCCACTGAAAAGTTACAACTG
CAGAGGAAATGGGAAAGAGTAAAAAACCATGCGAGTAAAATGTTAAAGATATCTCCATAT
GGTATAAACACTATTGGATCTTTGTACACAAAAATAACATTGTTTCTAACTGCTTTGGAG
TCATGCGCTAAAATTGATGGGTTAAACAATATTGGGCCTGGAACTATATTTGTAGGCGAT
CCAATTAAACAGTTGAATATGTCATATTGGTATAATCCCGCGATGGTCAGTGATTTGAAA
ACTGTGTCTAAGTTTTGGAGTTCTGAGATGTCAAAAGAAGAACTCGTTCTCAACGAAAGA
CAAACAAGTTTCAAGATCAAGAGAGTTGAGCGAGATTCTTTTCCTCCAGGATCAGATCTT
GTCTCTCCTCTTTTCCCCATCACTGATCTTAAGTCTGCCATTCAAGGGGTTGTTGAGATC
ATTTATCAGGGTGAAGGGGGAAGTCCATGTTCACCCTTCAAGTCAACCAAGCCTGGTGGG
ACTCTGTCACTCCAGACTTCTCATTATGTGAGGTTCATGGAAATTGTACATGGTCGGACG
TTGGGTTCAAATGAAAAGACCATCGGTTGACAGTGGGATATCATGTTTGAACCTCACACT
TTTCGACTGTCCAAACAAACTCAAAAGTGATGAAGCTTTCTGCTTTGCAGGGGATGAAAT
AGCTTTTTATGAAGATGGTGTATGGCCAATAGTAAGCAACCCCACACCAACCATGTACAA
ACCAGGGACAGATGCTCACCATTTTAACCATCAGTTTAATATTCAATACACAAGATTACT
TTTCTGTTTAGAATCTGCATTTGGTGGAAACCCGTCTAAAATGCGGTCATGCATGAGCTA
CATGTACGACCTGATAATCACGGGCAAACGATTGGTCAGATCACCAGTGGGTGTCACTAA
AGATACATTTATTACGCAACCAACTTGCTCAAACTGCCACGCTTCTCCTACTTGGGATTT
TATTCGTGACAAGTCAGAACGAAGTGGATTCCCTTTGATTATAGGATGATATAATGTAAT
TGTATTTATTATATTGGTACATTATCAAAAAAACCTGTTTTAATATATAGGTTCAATACC
TGAAACACCTATCTACTAAAGTTAAGTTTAGCACATCATTCTGTATGTAGATTGTTGCAT
ACGTTGTTATTGTGTTAAATTTCTTCCTATTAGTGCACCAATACCATAGATTTTATGACA
TGGCTATTATTTTTAAACTTTACTAAACTTTTGCCAAAACTTGTATAAACTAAAATGTTT
CGCAGCCTACTTCATTTGTTGTCTGGTGTTATTTTAGCATTGTATATTTGTTTTTTTTAT
TGATATATACACCAACTTTCTGCCCAAACCACATAAAAACCAAAACCCACATTGCCAAGA
CTACCCTTGTTATTACTTTTAAATGAGAAAAAATGTTGGGAAATGGAAACACAAAAGTAA
AAAGAAAAAA
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[17-79] 2.1E-9 |
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[28-75] 9.262 |
| SMART |
TSP1_rpt (IPR000884) - T[31-75] 1.2E-7 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[32-74] 2.09E-6 |
| Pfam |
TSP1_rpt (IPR000884) - T[34-69] 1.9E-5 |
| Gene3D |
Ferritin-like (IPR012347) - T[698-870] 1.3E-29 |
| SUPERFAMILY |
Ferritin-like_SF (IPR009078) - T[706-777] 6.6E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|