- Transcript 'KH2012:KH.C1.358.v1....' >
- Transcript 'KH2012:KH.C8.109.v1....' >
- Transcript 'KH2012:KH.C8.284.v1....' >
- Clone 'cien102327' >
- Transcript 'KH2012:KH.C13.135.v1...'
Transcript Model
Transcript Id
KH2012:KH.C13.135.v1.A.SL1-1
Possible name(s)
MTF2; PHF1; PHF19
Gene model
Location
KhC13 [1,236,102 / 1,244,694]
Amino acid sequence
Length: 723
>KH.C13.135.v1.A.SL1-1
TITMVRNKAGSSTSGSPSSSSIKDYFKPSPTRRIFSPKSPTPPSPTNNKTKTSPLKTESK
PPKSLFTSQAVSNHIKAEDSTHNGEVVAQTNGIASLFEKRKLDYRSDQKGQSNGIIRSSK
FVISPKKEPEMNGLSPHKKETPQTFRMQAQQLSSYRKMFGVFKEGHDVLARWSDGLYYLG
SVCKVDDFQHKCYVQFEDKSVFWAQFKDLQMINNKDDSDNDSGSDVTCTMCRDGNSDPPN
EIVLCDKCGQGYHQLCHVPPIDTSVLNEEDAPWQCRTCVFAAVAKRGGAEAEGTADYKSN
VFSLNYAVKLCMLKQILPYDAKSLTWDRGHKVNSEETYCYCGGPGDWYLKMLQCCRCQQW
FHEACIQCLQTPVLYGDRFFLFVCSICNHGNEYVKRLPMRWVDVVHLVLYNITIAKLVKY
YDFHSILMPFFAQNWESLQLGDVSHYNNRSQLKERVLETLQNNKSRFQCGSESKKAKMSW
GLRTRSPPVPPTLTVPLNGEINNDLLSTLDLRHGSTLLNDSPTPMKRYGPGDTDGDSPSV
KRRFSSADMDWSPTKTNDKTFVEPNHFIRDNLFDRLTYNTRTGNIKENAPSASDDQPKRR
RGRPRKNLSRPSTRGRGRPNSLRTRENNFQKPSFSNDASTVIPMHEMFKQNPHNNLPGHT
AHEDLRKNIARYFGPEGRIACGERYRVLAKRQVSMKGNPPHTEYLIEWEGYTAKQLHEKS
YSR
Nucleotide sequence
Length: 2,635
>KH2012:KH.C13.135.v1.A.SL1-1
ATTTATAGAAATAATAAACAATAACCATGGTCCGCAACAAGGCTGGTTCATCCACAAGTG
GGAGCCCAAGTTCATCTTCAATAAAAGATTATTTTAAACCTTCACCAACGAGAAGAATTT
TCTCGCCTAAGTCTCCAACCCCACCCAGCCCTACCAATAATAAAACTAAAACCTCACCCC
TAAAAACTGAATCAAAGCCACCAAAAAGTTTATTCACAAGCCAAGCTGTATCTAACCATA
TTAAAGCAGAAGATAGCACCCATAATGGAGAAGTTGTTGCCCAAACCAACGGTATTGCTT
CTTTATTCGAAAAACGAAAACTCGACTACCGTTCTGACCAAAAGGGTCAATCTAACGGAA
TAATTCGGAGCTCAAAGTTTGTCATTTCACCTAAAAAAGAGCCAGAGATGAATGGCTTAA
GTCCGCATAAGAAGGAAACCCCCCAAACATTCCGTATGCAGGCACAACAACTTTCGTCGT
ACAGGAAAATGTTTGGGGTTTTTAAAGAAGGACATGATGTGTTGGCAAGATGGTCAGATG
GACTGTATTATCTGGGTTCTGTATGTAAGGTTGATGATTTCCAGCACAAATGTTACGTCC
AGTTTGAAGACAAGTCAGTCTTCTGGGCCCAGTTTAAAGACCTCCAGATGATCAACAATA
AAGATGATTCTGACAATGACAGCGGGTCAGATGTGACATGTACAATGTGCAGAGATGGAA
ACTCAGATCCACCCAATGAGATTGTGTTGTGTGATAAGTGTGGGCAAGGCTACCACCAGT
TATGCCACGTGCCCCCTATAGACACAAGTGTTTTAAATGAAGAGGATGCACCATGGCAAT
GCAGAACCTGTGTATTTGCTGCTGTTGCTAAACGGGGAGGGGCTGAAGCAGAAGGAACAG
CAGACTATAAATCAAATGTCTTTTCTTTAAACTATGCTGTAAAACTTTGTATGTTGAAAC
AAATTTTACCTTATGATGCGAAGTCACTAACATGGGATAGAGGTCATAAGGTCAACAGTG
AAGAGACTTACTGTTACTGTGGAGGACCAGGGGATTGGTATTTAAAGATGCTACAATGCT
GTAGATGCCAACAATGGTTTCATGAAGCGTGCATACAGTGCCTACAAACACCAGTGTTGT
ACGGCGACAGATTCTTCCTATTTGTTTGTTCGATATGTAACCATGGAAACGAATATGTTA
AACGTCTTCCAATGAGATGGGTTGACGTTGTTCACTTGGTATTATACAACATCACCATAG
CAAAGTTGGTGAAATATTACGACTTCCATTCAATACTCATGCCTTTCTTTGCACAGAACT
GGGAGTCTTTACAACTGGGAGATGTAAGTCATTATAATAATAGAAGCCAACTAAAGGAAA
GAGTTTTGGAAACTTTGCAAAATAATAAATCCAGGTTTCAGTGCGGCAGCGAGAGCAAGA
AAGCGAAGATGAGTTGGGGGTTGCGTACGAGGTCACCCCCGGTACCCCCTACCCTCACTG
TTCCATTAAACGGGGAAATAAACAATGATTTGCTTTCCACGTTGGACCTCAGACATGGAT
CTACTTTGTTGAATGACTCACCAACTCCTATGAAGAGGTATGGACCTGGTGATACAGATG
GGGATTCCCCTTCAGTGAAAAGAAGATTCAGCTCCGCAGATATGGATTGGAGTCCCACTA
AAACCAATGACAAAACATTCGTCGAACCAAATCATTTTATCCGAGATAATTTGTTTGACA
GATTAACTTACAATACTAGAACAGGAAACATAAAGGAAAATGCCCCATCTGCGAGTGACG
ACCAACCAAAGCGTCGACGAGGCCGCCCTCGTAAAAACCTCAGCAGACCATCTACTAGAG
GCAGAGGAAGACCAAATTCGTTAAGAACTCGCGAAAATAATTTCCAGAAACCTTCGTTTT
CAAACGATGCTTCGACCGTTATCCCTATGCACGAGATGTTTAAACAGAATCCACATAATA
ATTTACCTGGCCACACGGCCCATGAAGACTTGCGCAAGAACATCGCACGATACTTTGGTC
CAGAAGGACGTATAGCATGCGGGGAGAGATACCGCGTTCTCGCTAAACGACAAGTATCGA
TGAAGGGAAACCCCCCACACACAGAATACCTAATTGAATGGGAAGGTTACACTGCAAAAC
AACTACATGAAAAGAGCTATAGTAGATAAAATAAACCTTTTTTGTGGGAATATGTTATAA
AATAATAAAACTTGCAGTTTCTGTTGATGAAAAAGCCATTTGTCTATTGATGGTGATGTC
ATTATTTCAGTGATGTCATATTGGTGTCATTGTTTCAGTGATGTCATATTGATGTTATTT
TATTAACTTGTGATGTCATAAAAGCAAGTTCATTTTTTCTTACATCACAAGTAACTTCAC
TAATGTTTCTCTTGTTAATTTTTTAAATTTTTTTGCAGTTTAATCATATGTCTGTTTGTG
GATAGAACCCGTTTGCAAATCATGGTTTATTGTGTTGAGTGTCGTTGTCACTTTTTATTC
ATCCATCTAGTTACCAACCATGTTTCAAAGGCTGGATTTTTGATATTACTTTGTTTCAAT
TGTCCACTTCTCAGAATAAAAGTTGACTCAGAAAAATACAAGAAAATTGAAAATG
| SMART |
Tudor (IPR002999) - T[160-217] 3.2E-9 |
| SUPERFAMILY |
Znf_FYVE_PHD (IPR011011) - T[212-282] 3.32E-16 - T[326-404] 3.77E-14 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[222-281] 6.9E-17 |
| ProSiteProfiles |
Znf_PHD-finger (IPR019787) - T[225-281] 9.988 |
| SMART |
Znf_PHD (IPR001965) - T[227-279] 2.0E-10 - T[338-388] 0.0039 |
| ProSitePatterns |
Zinc_finger_PHD-type_CS (IPR019786) - T[228-278] . - T[339-387] . |
| Pfam |
Znf_PHD-finger (IPR019787) - T[228-279] 1.9E-11 |
| Pfam |
Mtf2_C_dom (IPR025894) - T[662-712] 9.7E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MTF2_HUMAN | 49.263 % | 372 | 4.79E-120 |
| PHF19_HUMAN | 43.681 % | 326 | 1.11E-102 |
| PHF1_HUMAN | 46.526 % | 305 | 9.62E-95 |