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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S127...' > 
  2. Clone 'AHC0AAA200YD18' > 
  3. Transcript 'KH2012:KH.C13.151.v2...'

Transcript Model

Transcript Id

KH2012:KH.C13.151.v2.B.SL2-1

Possible name(s)

SMG6; SWT1

Gene model

KH2012:KH.C13.151

Location

KhC13 [1,463,108 / 1,467,421]

Sequences

Amino acid sequence

Length: 570

>KH.C13.151.v2.B.SL2-1
NIKDISSTLMSLQVQVHGRGLLVPTEKSKAQSTSSFKNVGKKRKSGDMLEINTSKTTIAN
NKSDNHQKVKTRKRRKKNKILKQEDTANNNNKITNSSTSDISIDSLFESPGTTNKQQEEN
ARRKQEEYQTLDMPPLIDVEQLAIVSKQSPKQSPLSHNTQKSQLLQNKISYSPSDLKTPT
KVTPKFNPNVTPKFTHNVTPKFTHNITPKVTPKVGSSPRTPSSVTPTKTTPKVTLSRKVT
SNRRRSNIFINPLCDDGNEDNVDEITRPVISPKVVRPIITHHKTPKAQVVKDKDPAEVEV
MDTSDTIYNCKDIPKAIEEKESTPAITNAPPNANAILFIVVDTNILLYSSCLKDIDFIIN
WCPPPRTMFRRAVVVVPWVVLQELDHLKTNKQTAAKARRSIAFLNRHFSCKKPGIRGQTI
LEAAAVVDGLNIEINDDRLLQCCFFFSRLPGKHKTLLFTNDSNLANKAMINSFMSYSNLQ
ALMKGVTEYTSLPNPVLDEEGSTKPVIPTPRGSSTSSIVEEDTPKSMVLQLSLEQMHLAL
CVILETEMREAYGRIWEEVVVKRPPWSLA+

Nucleotide sequence

Length: 1,799

>KH2012:KH.C13.151.v2.B.SL2-1
GAAATGGCTTCAACTGTTAAAATATCCCCAAAGGAATTATCCAAAGTACAGAATCAACTC
CCACAAGGCTGGGTAGCCAAAGAATCGTTAAAATATAAAGGACATATCTTCTACTTTAAT
GTCTCTGCAGGTACAAGTACATGGACGAGGCCTACTCGTACCTACAGAGAAAAGTAAAGC
ACAATCTACTTCTTCATTTAAAAATGTTGGAAAGAAGAGAAAATCTGGAGATATGCTGGA
AATAAATACATCTAAAACAACTATTGCAAATAACAAAAGTGATAATCACCAAAAAGTAAA
AACTAGAAAAAGACGAAAGAAAAATAAAATATTAAAACAAGAAGACACTGCAAATAACAA
CAACAAGATAACAAACAGTTCAACTAGTGATATTTCAATTGACTCTTTATTTGAATCCCC
TGGAACTACAAACAAACAACAGGAAGAAAATGCAAGAAGAAAACAAGAAGAATACCAAAC
ACTGGACATGCCGCCATTGATTGATGTGGAACAATTAGCCATTGTTTCCAAACAATCACC
AAAACAATCACCATTATCACATAACACACAAAAATCACAATTACTGCAAAACAAGATTTC
ATATTCACCAAGTGACTTAAAAACCCCAACCAAAGTCACCCCTAAATTTAACCCCAATGT
TACCCCCAAGTTCACCCACAATGTTACCCCCAAGTTCACCCACAATATTACACCCAAAGT
TACCCCTAAAGTTGGCTCATCACCCCGCACACCAAGTAGCGTTACCCCAACCAAAACTAC
ACCAAAAGTAACCCTATCGCGAAAAGTAACTTCTAATAGAAGAAGATCAAATATCTTTAT
AAATCCCTTATGTGATGATGGAAATGAAGACAATGTTGATGAAATTACTCGCCCAGTTAT
CTCTCCAAAAGTTGTAAGACCAATTATCACTCATCATAAAACACCTAAAGCTCAAGTTGT
TAAGGATAAAGATCCTGCTGAAGTTGAAGTGATGGACACATCAGATACAATATACAACTG
TAAAGATATACCAAAAGCAATAGAAGAGAAAGAATCCACACCTGCCATTACAAACGCACC
TCCCAATGCAAATGCCATCTTATTCATTGTAGTTGATACAAACATATTGTTGTACTCAAG
TTGTTTGAAAGATATTGACTTCATTATTAATTGGTGCCCACCTCCAAGGACGATGTTTCG
ACGAGCTGTTGTTGTTGTGCCTTGGGTTGTTCTTCAGGAGCTTGACCATTTGAAGACAAA
CAAACAGACAGCAGCAAAAGCAAGACGATCAATCGCATTTCTTAATAGACATTTTTCTTG
CAAGAAACCTGGAATTCGGGGCCAAACTATATTAGAAGCAGCTGCTGTTGTGGATGGATT
AAACATTGAAATAAACGATGACAGACTCCTACAATGTTGTTTCTTCTTTTCAAGATTGCC
AGGAAAACATAAAACGTTGTTGTTTACAAATGATTCAAACCTGGCAAACAAAGCTATGAT
TAATAGCTTCATGAGTTATTCCAACTTACAAGCACTAATGAAAGGTGTAACTGAATATAC
TTCACTTCCTAATCCAGTACTTGATGAAGAAGGTTCAACAAAACCTGTAATACCAACTCC
CAGAGGGTCCTCCACATCCTCTATAGTGGAGGAAGACACCCCAAAGTCCATGGTCCTCCA
GTTATCACTGGAGCAGATGCATCTTGCTCTCTGTGTGATCCTGGAGACAGAGATGAGGGA
AGCATATGGGAGGATTTGGGAGGAAGTTGTGGTAAAGAGGCCACCATGGAGTTTAGCAG

InterProScan

SMART
PIN_dom (IPR002716) - T[337-466] 1.1E-5
SUPERFAMILY
PIN-like_dom_sf (IPR029060) - T[338-469] 5.43E-8
Pfam
PIN_dom (IPR002716) - T[339-473] 3.0E-21

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SWT1_HUMAN 32.114 % 104 2.09E-23