- Transcript 'KH2012:KH.S406.19.v1...' >
- Transcript 'KH2012:KH.C1.340.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.340.v1.A.SL1-1
Possible name(s)
MMP14; MMP16; MMP24
Gene model
Location
KhC1 [4,879,828 / 4,889,551]
Amino acid sequence
Length: 265
>KH.C1.340.v1.A.SL1-1
LKPLPLYTFMAYNRSMFICTIQKIRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKK
SLKLRDKRDADVQFAENYLVNYGYVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGT
FDDATLEMMKKPRCANPDKMSVESNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTH
EAIDDAFRVWGSFVPLQFKKVDASQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSG
IGGDTHFDGAEPWTLHQGPNRATIL
Nucleotide sequence
Length: 1,094
>KH2012:KH.C1.340.v1.A.SL1-1
ATCTTAAGCCTTTGCCTCTTTATACATTCATGGCTTACAATAGAAGTATGTTTATTTGTA
CAATACAAAAGATTCGCTGCATATATACTTTCATTTTTATACTATTTATTATTAAATGCT
CCGAATCGGTGTCAAACTTTCGACTACAAGTTATGCAAGGATCGAAGTTAGAAGAAAAGA
AGTCTCTCAAATTGCGTGACAAGCGAGATGCTGATGTCCAGTTTGCAGAGAATTACCTCG
TAAACTACGGGTACGTTCCTCCCGACTCGTTAAAATCCACCGGAGGCGCTGCAGAGCTCC
ATAGTCGGAGCAAAGCTTTAGTGGAAATGCAAAATTTTCTTGGTTTAACTCCAACAGGCA
CATTTGATGACGCTACACTGGAAATGATGAAGAAACCAAGATGCGCGAACCCCGACAAGA
TGTCTGTAGAAAGCAACCTGCGCAAAAAGAGATACGTCACCGTCGGTTCGCCATGGCAGA
AAAATCTTATCACATACTCAATCAACAATTTCACCCCCAAACTTGGGCAGAAATTAACCC
ACGAAGCTATTGACGATGCTTTTAGAGTGTGGGGTTCCTTTGTCCCGCTTCAATTTAAAA
AAGTCGACGCTTCACAAAACCCAGACATTGTAACTTTTTTTGCTGAGGGGTTCCATAACG
ATAACACAAACTTTGACGGTGTTGGTGGTTATCTTGCGCATGCGTTCTACCCCGGGTCGG
GTATTGGAGGTGACACACACTTCGACGGTGCTGAACCGTGGACGCTACATCAGGGGCCTA
ACAGGGCGACCATCTTATGAAATTTGAATCAAGTCCGACGCTAAGTCTAAAAAAACGAGG
CTTGAAATATCATCGGCGACACGCGACCCGTGATTTTAGATGATTGTGGAAAATAAAACC
CCATGTCGTCTCTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCAGAAACAAAAACCTGAAC
CCACAGATAGCGGTCAAATGCCCTTTTCTGTATTTTTTTTGTTTTTTTTTTACTAAAAAC
TTGTATAAAATAATGATGGCATAACATAATTTCTATTTATTCCTTCGGTCACAAAAACGG
ATATCAAACTAGCT
| SUPERFAMILY |
PGBD-like_sf (IPR036365) - T[67-138] 3.92E-17 |
| Pfam |
Peptidoglycan-bd-like (IPR002477) - T[69-129] 1.6E-8 |
| PANTHER |
MMP14 (IPR028693) - T[69-256] 1.0E-66 |
| Gene3D |
PGBDSf (IPR036366) - T[70-138] 3.2E-20 |
| PRINTS |
Pept_M10A (IPR021190) - T[129-142] 1.2E-16 - T[183-198] 1.2E-16 - T[207-235] 1.2E-16 |
| SMART |
Peptidase_Metallo (IPR006026) - T[154-264] 0.001 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[157-258] 2.6E-35 |
| Pfam |
Pept_M10_metallopeptidase (IPR001818) - T[158-258] 1.8E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMP14_HUMAN | 50.265 % | 189 | 2.79E-56 |
| MMP24_HUMAN | 46.701 % | 176 | 3.44E-51 |
| MMP16_HUMAN | 48.421 % | 171 | 1.6E-49 |