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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S406.19.v1...'
  2. Transcript 'KH2012:KH.C1.340.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.340.v1.A.SL1-1

Possible name(s)

MMP14; MMP16; MMP24

Location

KhC1 [4,879,828 / 4,889,551]

Sequences

Amino acid sequence

Length: 265

>KH.C1.340.v1.A.SL1-1
LKPLPLYTFMAYNRSMFICTIQKIRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKK
SLKLRDKRDADVQFAENYLVNYGYVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGT
FDDATLEMMKKPRCANPDKMSVESNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTH
EAIDDAFRVWGSFVPLQFKKVDASQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSG
IGGDTHFDGAEPWTLHQGPNRATIL

Nucleotide sequence

Length: 1,094

>KH2012:KH.C1.340.v1.A.SL1-1
ATCTTAAGCCTTTGCCTCTTTATACATTCATGGCTTACAATAGAAGTATGTTTATTTGTA
CAATACAAAAGATTCGCTGCATATATACTTTCATTTTTATACTATTTATTATTAAATGCT
CCGAATCGGTGTCAAACTTTCGACTACAAGTTATGCAAGGATCGAAGTTAGAAGAAAAGA
AGTCTCTCAAATTGCGTGACAAGCGAGATGCTGATGTCCAGTTTGCAGAGAATTACCTCG
TAAACTACGGGTACGTTCCTCCCGACTCGTTAAAATCCACCGGAGGCGCTGCAGAGCTCC
ATAGTCGGAGCAAAGCTTTAGTGGAAATGCAAAATTTTCTTGGTTTAACTCCAACAGGCA
CATTTGATGACGCTACACTGGAAATGATGAAGAAACCAAGATGCGCGAACCCCGACAAGA
TGTCTGTAGAAAGCAACCTGCGCAAAAAGAGATACGTCACCGTCGGTTCGCCATGGCAGA
AAAATCTTATCACATACTCAATCAACAATTTCACCCCCAAACTTGGGCAGAAATTAACCC
ACGAAGCTATTGACGATGCTTTTAGAGTGTGGGGTTCCTTTGTCCCGCTTCAATTTAAAA
AAGTCGACGCTTCACAAAACCCAGACATTGTAACTTTTTTTGCTGAGGGGTTCCATAACG
ATAACACAAACTTTGACGGTGTTGGTGGTTATCTTGCGCATGCGTTCTACCCCGGGTCGG
GTATTGGAGGTGACACACACTTCGACGGTGCTGAACCGTGGACGCTACATCAGGGGCCTA
ACAGGGCGACCATCTTATGAAATTTGAATCAAGTCCGACGCTAAGTCTAAAAAAACGAGG
CTTGAAATATCATCGGCGACACGCGACCCGTGATTTTAGATGATTGTGGAAAATAAAACC
CCATGTCGTCTCTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCAGAAACAAAAACCTGAAC
CCACAGATAGCGGTCAAATGCCCTTTTCTGTATTTTTTTTGTTTTTTTTTTACTAAAAAC
TTGTATAAAATAATGATGGCATAACATAATTTCTATTTATTCCTTCGGTCACAAAAACGG
ATATCAAACTAGCT

InterProScan

SUPERFAMILY
PGBD-like_sf (IPR036365) - T[67-138] 3.92E-17
Pfam
Peptidoglycan-bd-like (IPR002477) - T[69-129] 1.6E-8
PANTHER
MMP14 (IPR028693) - T[69-256] 1.0E-66
Gene3D
PGBDSf (IPR036366) - T[70-138] 3.2E-20
PRINTS
Pept_M10A (IPR021190) - T[129-142] 1.2E-16 - T[183-198] 1.2E-16 - T[207-235] 1.2E-16
SMART
Peptidase_Metallo (IPR006026) - T[154-264] 0.001
Gene3D
MetalloPept_cat_dom_sf (IPR024079) - T[157-258] 2.6E-35
Pfam
Pept_M10_metallopeptidase (IPR001818) - T[158-258] 1.8E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MMP14_HUMAN 50.265 % 189 2.79E-56
MMP24_HUMAN 46.701 % 176 3.44E-51
MMP16_HUMAN 48.421 % 171 1.6E-49