- Transcript 'Phmamm.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C1.340.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.340.v1.A.SL2-1
Possible name(s)
MMP14; MMP16; MMP24
Gene model
Location
KhC1 [4,879,871 / 4,889,551]
Amino acid sequence
Length: 251
>KH.C1.340.v1.A.SL2-1
SMFICTIQKIRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKKSLKLRDKRDADVQF
AENYLVNYGYVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGTFDDATLEMMKKPRC
ANPDKMSVESNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTHEAIDDAFRVWGSFV
PLQFKKVDASQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWT
LHQGPNRATIL
Nucleotide sequence
Length: 1,051
>KH2012:KH.C1.340.v1.A.SL2-1
AAGTATGTTTATTTGTACAATACAAAAGATTCGCTGCATATATACTTTCATTTTTATACT
ATTTATTATTAAATGCTCCGAATCGGTGTCAAACTTTCGACTACAAGTTATGCAAGGATC
GAAGTTAGAAGAAAAGAAGTCTCTCAAATTGCGTGACAAGCGAGATGCTGATGTCCAGTT
TGCAGAGAATTACCTCGTAAACTACGGGTACGTTCCTCCCGACTCGTTAAAATCCACCGG
AGGCGCTGCAGAGCTCCATAGTCGGAGCAAAGCTTTAGTGGAAATGCAAAATTTTCTTGG
TTTAACTCCAACAGGCACATTTGATGACGCTACACTGGAAATGATGAAGAAACCAAGATG
CGCGAACCCCGACAAGATGTCTGTAGAAAGCAACCTGCGCAAAAAGAGATACGTCACCGT
CGGTTCGCCATGGCAGAAAAATCTTATCACATACTCAATCAACAATTTCACCCCCAAACT
TGGGCAGAAATTAACCCACGAAGCTATTGACGATGCTTTTAGAGTGTGGGGTTCCTTTGT
CCCGCTTCAATTTAAAAAAGTCGACGCTTCACAAAACCCAGACATTGTAACTTTTTTTGC
TGAGGGGTTCCATAACGATAACACAAACTTTGACGGTGTTGGTGGTTATCTTGCGCATGC
GTTCTACCCCGGGTCGGGTATTGGAGGTGACACACACTTCGACGGTGCTGAACCGTGGAC
GCTACATCAGGGGCCTAACAGGGCGACCATCTTATGAAATTTGAATCAAGTCCGACGCTA
AGTCTAAAAAAACGAGGCTTGAAATATCATCGGCGACACGCGACCCGTGATTTTAGATGA
TTGTGGAAAATAAAACCCCATGTCGTCTCTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCA
GAAACAAAAACCTGAACCCACAGATAGCGGTCAAATGCCCTTTTCTGTATTTTTTTTGTT
TTTTTTTTACTAAAAACTTGTATAAAATAATGATGGCATAACATAATTTCTATTTATTCC
TTCGGTCACAAAAACGGATATCAAACTAGCT
| SUPERFAMILY |
PGBD-like_sf (IPR036365) - T[53-124] 3.61E-17 |
| Pfam |
Peptidoglycan-bd-like (IPR002477) - T[55-115] 1.4E-8 |
| PANTHER |
MMP14 (IPR028693) - T[55-242] 8.4E-67 |
| Gene3D |
PGBDSf (IPR036366) - T[56-124] 2.9E-20 |
| PRINTS |
Pept_M10A (IPR021190) - T[115-128] 1.1E-16 - T[169-184] 1.1E-16 - T[193-221] 1.1E-16 |
| SMART |
Peptidase_Metallo (IPR006026) - T[140-250] 0.001 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[143-244] 2.3E-35 |
| Pfam |
Pept_M10_metallopeptidase (IPR001818) - T[144-244] 1.6E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMP14_HUMAN | 50.265 % | 189 | 1.3E-56 |
| MMP24_HUMAN | 46.701 % | 176 | 2.09E-51 |
| MMP15_HUMAN | 46.734 % | 172 | 8.72E-50 |