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TRANSCRIPT CARD

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  1. Clone 'cima038h12' > 
  2. Transcript 'KH2012:KH.C1.340.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.340.v1.A.SL3-1

Possible name(s)

MMP14; MMP16; MMP24

Gene model

KH2012:KH.C1.340

Location

KhC1 [4,879,899 / 4,889,551]

Sequences

Amino acid sequence

Length: 242

>KH.C1.340.v1.A.SL3-1
IRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKKSLKLRDKRDADVQFAENYLVNYG
YVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGTFDDATLEMMKKPRCANPDKMSVE
SNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTHEAIDDAFRVWGSFVPLQFKKVDA
SQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTLHQGPNRAT
IL

Nucleotide sequence

Length: 1,023

>KH2012:KH.C1.340.v1.A.SL3-1
ATTCGCTGCATATATACTTTCATTTTTATACTATTTATTATTAAATGCTCCGAATCGGTG
TCAAACTTTCGACTACAAGTTATGCAAGGATCGAAGTTAGAAGAAAAGAAGTCTCTCAAA
TTGCGTGACAAGCGAGATGCTGATGTCCAGTTTGCAGAGAATTACCTCGTAAACTACGGG
TACGTTCCTCCCGACTCGTTAAAATCCACCGGAGGCGCTGCAGAGCTCCATAGTCGGAGC
AAAGCTTTAGTGGAAATGCAAAATTTTCTTGGTTTAACTCCAACAGGCACATTTGATGAC
GCTACACTGGAAATGATGAAGAAACCAAGATGCGCGAACCCCGACAAGATGTCTGTAGAA
AGCAACCTGCGCAAAAAGAGATACGTCACCGTCGGTTCGCCATGGCAGAAAAATCTTATC
ACATACTCAATCAACAATTTCACCCCCAAACTTGGGCAGAAATTAACCCACGAAGCTATT
GACGATGCTTTTAGAGTGTGGGGTTCCTTTGTCCCGCTTCAATTTAAAAAAGTCGACGCT
TCACAAAACCCAGACATTGTAACTTTTTTTGCTGAGGGGTTCCATAACGATAACACAAAC
TTTGACGGTGTTGGTGGTTATCTTGCGCATGCGTTCTACCCCGGGTCGGGTATTGGAGGT
GACACACACTTCGACGGTGCTGAACCGTGGACGCTACATCAGGGGCCTAACAGGGCGACC
ATCTTATGAAATTTGAATCAAGTCCGACGCTAAGTCTAAAAAAACGAGGCTTGAAATATC
ATCGGCGACACGCGACCCGTGATTTTAGATGATTGTGGAAAATAAAACCCCATGTCGTCT
CTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCAGAAACAAAAACCTGAACCCACAGATAGC
GGTCAAATGCCCTTTTCTGTATTTTTTTTGTTTTTTTTTTACTAAAAACTTGTATAAAAT
AATGATGGCATAACATAATTTCTATTTATTCCTTCGGTCACAAAAACGGATATCAAACTA
GCT

InterProScan

SUPERFAMILY
PGBD-like_sf (IPR036365) - T[44-115] 3.3E-17
PANTHER
MMP14 (IPR028693) - T[46-233] 7.4E-67
Pfam
Peptidoglycan-bd-like (IPR002477) - T[46-106] 1.3E-8
Gene3D
PGBDSf (IPR036366) - T[47-115] 2.7E-20
PRINTS
Pept_M10A (IPR021190) - T[106-119] 9.9E-17 - T[160-175] 9.9E-17 - T[184-212] 9.9E-17
SMART
Peptidase_Metallo (IPR006026) - T[131-241] 0.001
Gene3D
MetalloPept_cat_dom_sf (IPR024079) - T[134-235] 2.1E-35
Pfam
Pept_M10_metallopeptidase (IPR001818) - T[135-235] 1.5E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MMP14_HUMAN 50.265 % 189 1.1E-56
MMP24_HUMAN 46.701 % 176 1.68E-51
MMP15_HUMAN 46.734 % 172 7.01E-50