- Transcript 'Cisavi.CG.ENS81.R155...' >
- Transcript 'KH2012:KH.C13.27.v1....' >
- Transcript 'KH2012:KH.C1.340.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.340.v1.A.SL3-1
Possible name(s)
MMP14; MMP16; MMP24
Gene model
Location
KhC1 [4,879,899 / 4,889,551]
Amino acid sequence
Length: 242
>KH.C1.340.v1.A.SL3-1
IRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKKSLKLRDKRDADVQFAENYLVNYG
YVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGTFDDATLEMMKKPRCANPDKMSVE
SNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTHEAIDDAFRVWGSFVPLQFKKVDA
SQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTLHQGPNRAT
IL
Nucleotide sequence
Length: 1,023
>KH2012:KH.C1.340.v1.A.SL3-1
ATTCGCTGCATATATACTTTCATTTTTATACTATTTATTATTAAATGCTCCGAATCGGTG
TCAAACTTTCGACTACAAGTTATGCAAGGATCGAAGTTAGAAGAAAAGAAGTCTCTCAAA
TTGCGTGACAAGCGAGATGCTGATGTCCAGTTTGCAGAGAATTACCTCGTAAACTACGGG
TACGTTCCTCCCGACTCGTTAAAATCCACCGGAGGCGCTGCAGAGCTCCATAGTCGGAGC
AAAGCTTTAGTGGAAATGCAAAATTTTCTTGGTTTAACTCCAACAGGCACATTTGATGAC
GCTACACTGGAAATGATGAAGAAACCAAGATGCGCGAACCCCGACAAGATGTCTGTAGAA
AGCAACCTGCGCAAAAAGAGATACGTCACCGTCGGTTCGCCATGGCAGAAAAATCTTATC
ACATACTCAATCAACAATTTCACCCCCAAACTTGGGCAGAAATTAACCCACGAAGCTATT
GACGATGCTTTTAGAGTGTGGGGTTCCTTTGTCCCGCTTCAATTTAAAAAAGTCGACGCT
TCACAAAACCCAGACATTGTAACTTTTTTTGCTGAGGGGTTCCATAACGATAACACAAAC
TTTGACGGTGTTGGTGGTTATCTTGCGCATGCGTTCTACCCCGGGTCGGGTATTGGAGGT
GACACACACTTCGACGGTGCTGAACCGTGGACGCTACATCAGGGGCCTAACAGGGCGACC
ATCTTATGAAATTTGAATCAAGTCCGACGCTAAGTCTAAAAAAACGAGGCTTGAAATATC
ATCGGCGACACGCGACCCGTGATTTTAGATGATTGTGGAAAATAAAACCCCATGTCGTCT
CTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCAGAAACAAAAACCTGAACCCACAGATAGC
GGTCAAATGCCCTTTTCTGTATTTTTTTTGTTTTTTTTTTACTAAAAACTTGTATAAAAT
AATGATGGCATAACATAATTTCTATTTATTCCTTCGGTCACAAAAACGGATATCAAACTA
GCT
| SUPERFAMILY |
PGBD-like_sf (IPR036365) - T[44-115] 3.3E-17 |
| PANTHER |
MMP14 (IPR028693) - T[46-233] 7.4E-67 |
| Pfam |
Peptidoglycan-bd-like (IPR002477) - T[46-106] 1.3E-8 |
| Gene3D |
PGBDSf (IPR036366) - T[47-115] 2.7E-20 |
| PRINTS |
Pept_M10A (IPR021190) - T[106-119] 9.9E-17 - T[160-175] 9.9E-17 - T[184-212] 9.9E-17 |
| SMART |
Peptidase_Metallo (IPR006026) - T[131-241] 0.001 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[134-235] 2.1E-35 |
| Pfam |
Pept_M10_metallopeptidase (IPR001818) - T[135-235] 1.5E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMP14_HUMAN | 50.265 % | 189 | 1.1E-56 |
| MMP24_HUMAN | 46.701 % | 176 | 1.68E-51 |
| MMP15_HUMAN | 46.734 % | 172 | 7.01E-50 |