- Transcript 'KH2012:KH.L116.85.v1...' >
- Transcript 'Haaura.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C1.340.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.340.v1.A.SL4-1
Possible name(s)
MMP14; MMP16; MMP24
Gene model
Location
KhC1 [4,879,874 / 4,889,551]
Amino acid sequence
Length: 250
>KH.C1.340.v1.A.SL4-1
MFICTIQKIRCIYTFIFILFIIKCSESVSNFRLQVMQGSKLEEKKSLKLRDKRDADVQFA
ENYLVNYGYVPPDSLKSTGGAAELHSRSKALVEMQNFLGLTPTGTFDDATLEMMKKPRCA
NPDKMSVESNLRKKRYVTVGSPWQKNLITYSINNFTPKLGQKLTHEAIDDAFRVWGSFVP
LQFKKVDASQNPDIVTFFAEGFHNDNTNFDGVGGYLAHAFYPGSGIGGDTHFDGAEPWTL
HQGPNRATIL
Nucleotide sequence
Length: 1,048
>KH2012:KH.C1.340.v1.A.SL4-1
TATGTTTATTTGTACAATACAAAAGATTCGCTGCATATATACTTTCATTTTTATACTATT
TATTATTAAATGCTCCGAATCGGTGTCAAACTTTCGACTACAAGTTATGCAAGGATCGAA
GTTAGAAGAAAAGAAGTCTCTCAAATTGCGTGACAAGCGAGATGCTGATGTCCAGTTTGC
AGAGAATTACCTCGTAAACTACGGGTACGTTCCTCCCGACTCGTTAAAATCCACCGGAGG
CGCTGCAGAGCTCCATAGTCGGAGCAAAGCTTTAGTGGAAATGCAAAATTTTCTTGGTTT
AACTCCAACAGGCACATTTGATGACGCTACACTGGAAATGATGAAGAAACCAAGATGCGC
GAACCCCGACAAGATGTCTGTAGAAAGCAACCTGCGCAAAAAGAGATACGTCACCGTCGG
TTCGCCATGGCAGAAAAATCTTATCACATACTCAATCAACAATTTCACCCCCAAACTTGG
GCAGAAATTAACCCACGAAGCTATTGACGATGCTTTTAGAGTGTGGGGTTCCTTTGTCCC
GCTTCAATTTAAAAAAGTCGACGCTTCACAAAACCCAGACATTGTAACTTTTTTTGCTGA
GGGGTTCCATAACGATAACACAAACTTTGACGGTGTTGGTGGTTATCTTGCGCATGCGTT
CTACCCCGGGTCGGGTATTGGAGGTGACACACACTTCGACGGTGCTGAACCGTGGACGCT
ACATCAGGGGCCTAACAGGGCGACCATCTTATGAAATTTGAATCAAGTCCGACGCTAAGT
CTAAAAAAACGAGGCTTGAAATATCATCGGCGACACGCGACCCGTGATTTTAGATGATTG
TGGAAAATAAAACCCCATGTCGTCTCTTCGTCGGTTTTTTCTTGTCCCTGTTCAGCAGAA
ACAAAAACCTGAACCCACAGATAGCGGTCAAATGCCCTTTTCTGTATTTTTTTTGTTTTT
TTTTTACTAAAAACTTGTATAAAATAATGATGGCATAACATAATTTCTATTTATTCCTTC
GGTCACAAAAACGGATATCAAACTAGCT
| SUPERFAMILY |
PGBD-like_sf (IPR036365) - T[52-123] 3.45E-17 |
| PANTHER |
MMP14 (IPR028693) - T[54-241] 8.3E-67 |
| Pfam |
Peptidoglycan-bd-like (IPR002477) - T[54-114] 1.4E-8 |
| Gene3D |
PGBDSf (IPR036366) - T[55-123] 2.9E-20 |
| PRINTS |
Pept_M10A (IPR021190) - T[114-127] 1.1E-16 - T[168-183] 1.1E-16 - T[192-220] 1.1E-16 |
| SMART |
Peptidase_Metallo (IPR006026) - T[139-249] 0.001 |
| Gene3D |
MetalloPept_cat_dom_sf (IPR024079) - T[142-243] 2.3E-35 |
| Pfam |
Pept_M10_metallopeptidase (IPR001818) - T[143-243] 1.6E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MMP14_HUMAN | 50.265 % | 189 | 1.33E-56 |
| MMP24_HUMAN | 46.701 % | 176 | 2.02E-51 |
| MMP15_HUMAN | 46.734 % | 172 | 1.06E-49 |