Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.347.v1.A.SL4-1

Possible name(s)

SEC62

Gene model

KH2012:KH.C1.347

Location

KhC1 [7,484,403 / 7,490,202]

Sequences

Amino acid sequence

Length: 349

>KH.C1.347.v1.A.SL4-1
ITGDMSERRKKKNKMGAQSEEPSKEELQMAKHVRFKTPKKNTIMQKQKVDYFVGSKAVDT
LMNSKWAKSSKKGDAIISSREEAIIFMEKLLCSNLFYRVEKILKETKADKEKKNLKSKEN
EEDSKVKKRKKDKKVEENEKKETDEKKKKRKYKLQAHEEQVFYDSSDIYVWLYDPISPKT
WFLGGVLLLGVIAATLFPIWPPSVRVGVYYLTVVGGFFVGGILGTALLRTILFGVIYVFT
LGTHHLWVLPNLLEDVGFYDSFKPLYTYEYKGSKQETKESNEDEEEEKEDQDEKDDKEEP
KDDPIKSEEEEKIARSTDEFSDESEPELEVQYEDSDYEIIDGKVPAKEE

Nucleotide sequence

Length: 1,435

>KH2012:KH.C1.347.v1.A.SL4-1
GTATTTCAATTGCATTCTGGAGTATTTAGTCCGCCATTTAAATCACTGGAGATATGTCAG
AACGAAGGAAAAAGAAGAATAAAATGGGGGCACAGAGTGAAGAGCCAAGCAAGGAGGAGT
TACAAATGGCCAAACATGTTCGTTTTAAGACGCCAAAGAAGAACACAATTATGCAAAAGC
AAAAAGTGGATTATTTTGTTGGTTCCAAGGCAGTGGACACGCTAATGAATTCAAAGTGGG
CAAAATCTTCAAAAAAGGGGGATGCTATTATATCCAGCAGAGAAGAAGCGATTATTTTTA
TGGAGAAGTTGCTTTGCAGTAATCTATTTTATCGAGTTGAAAAAATCTTGAAAGAAACAA
AAGCCGATAAGGAAAAGAAAAATCTTAAATCAAAAGAGAATGAAGAGGATTCAAAGGTGA
AAAAAAGAAAAAAGGACAAGAAAGTGGAAGAGAATGAGAAAAAGGAGACCGATGAAAAGA
AGAAGAAAAGAAAATATAAACTTCAAGCTCATGAAGAGCAAGTGTTTTATGATTCTTCTG
ATATCTATGTTTGGCTGTACGACCCAATTAGCCCCAAAACATGGTTTTTAGGTGGCGTGC
TTCTTCTGGGAGTCATTGCTGCGACGCTCTTTCCTATTTGGCCACCAAGTGTCAGAGTTG
GTGTGTATTATCTGACAGTTGTTGGGGGATTTTTTGTTGGAGGAATCCTTGGCACTGCAC
TATTGCGAACCATATTATTTGGAGTAATATACGTTTTCACTTTGGGCACACACCATTTGT
GGGTCCTCCCTAATTTACTGGAGGATGTTGGGTTCTATGATTCATTTAAACCCCTGTATA
CTTATGAATACAAGGGCTCCAAGCAAGAAACTAAAGAAAGTAATGAGGATGAAGAAGAAG
AGAAAGAGGATCAGGATGAAAAGGATGACAAAGAAGAACCTAAAGATGATCCAATCAAAT
CAGAAGAAGAAGAAAAAATCGCTCGCTCCACCGATGAATTTTCGGACGAATCCGAACCAG
AACTTGAGGTTCAATATGAAGACAGTGATTATGAGATCATAGATGGTAAAGTGCCTGCCA
AAGAAGAGTAGAAACCCAAACGCTGCTTGGAAATTCTCAGACCCAGCTAATGCCAAAAAA
CTGCTGCGATGTAACTGATGTAATTAGCTTGCCGCGACCAAAATACGAATACTGTGAGTT
ACACATTAAACTGGTGCTCATTATGACAACCACCACGTGTAACAGAAGAGTTTCATTTGT
AGTATCGTATATTGCCTTCCATAGGGGACCATTAAAACCATGTTGTGTTAAACTGTATTG
TATATACGCGTGTATATAGAGTAACCTACGGTGATGTAGGTTGATATGTTTGTTTTAGGA
AATGTTTGACAAAGTTTTATTGTACTGCCGCTAATAAAAGAATATTTCGGGTACA

InterProScan

PANTHER	Sec62 (IPR004728) - T[5-322] 2.9E-91
Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[24-123] 9.2E-6
Pfam	Sec62 (IPR004728) - T[104-287] 1.8E-59

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SEC62_HUMAN	41.615 %	244	3.12E-78