Aniseed - Transcript Card

Clone 'cima879908' >
Transcript 'KH2012:KH.C5.166.v1....' >
Transcript 'KH2012:KH.C1.347.v3....'

Transcript Model

Transcript Id

KH2012:KH.C1.347.v3.A.ND5-1

Possible name(s)

SEC62

Gene model

KH2012:KH.C1.347

Location

KhC1 [7,475,166 / 7,490,202]

Sequences

Amino acid sequence

Length: 349

>KH.C1.347.v3.A.ND5-1
ITGDMSERRKKKNKMGAQSEEPSKEELQMAKHVRFKTPKKNTIMQKQKVDYFVGSKAVDT
LMNSKWAKSSKKGDAIISSREEAIIFMEKLLCSNLFYRVEKILKETKADKEKKNLKSKEN
EEDSKVKKRKKDKKVEENEKKETDEKKKKRKYKLQAHEEQVFYDSSDIYVWLYDPISPKT
WFLGGVLLLGVIAATLFPIWPPSVRVGVYYLTVVGGFFVGGILGTALLRTILFGVIYVFT
LGTHHLWVLPNLLEDVGFYDSFKPLYTYEYKGSKQETKESNEDEEEEKEDQDEKDDKEEP
KDDPIKSEEEEKIARSTDEFSDESEPELEVQYEDSDYEIIDGKVPAKEE

Nucleotide sequence

Length: 1,737

>KH2012:KH.C1.347.v3.A.ND5-1
TTTATTCAATACTTAAACCATTATTTGTATTGTGATAATATTAATAAATATAAGATTATG
CTTACCAGATGATTTTGGATGGCCACCGGGAAAATAAAAACGAGGCATTTGCAGCATTGC
AAAACGATTGCAGCTACTTTGTAATTTGATCCACAATTACTCAATGCACGCACAACCTGA
ACAGTGAGGTTTTCGAAACTGTTTCAATTCTTCCTTCAAAGTTCGCTGAGTTTTTGGGAG
GTTGAACCATCTGAACAAAGAAATCACTGAGTTTAAACTTAAGCATAAATGAATGAATGA
ATGTATTTCAATTGCATTCTGGAGTATTTAGTCCGCCATTTAAATCACTGGAGATATGTC
AGAACGAAGGAAAAAGAAGAATAAAATGGGGGCACAGAGTGAAGAGCCAAGCAAGGAGGA
GTTACAAATGGCCAAACATGTTCGTTTTAAGACGCCAAAGAAGAACACAATTATGCAAAA
GCAAAAAGTGGATTATTTTGTTGGTTCCAAGGCAGTGGACACGCTAATGAATTCAAAGTG
GGCAAAATCTTCAAAAAAGGGGGATGCTATTATATCCAGCAGAGAAGAAGCGATTATTTT
TATGGAGAAGTTGCTTTGCAGTAATCTATTTTATCGAGTTGAAAAAATCTTGAAAGAAAC
AAAAGCCGATAAGGAAAAGAAAAATCTTAAATCAAAAGAGAATGAAGAGGATTCAAAGGT
GAAAAAAAGAAAAAAGGACAAGAAAGTGGAAGAGAATGAGAAAAAGGAGACCGATGAAAA
GAAGAAGAAAAGAAAATATAAACTTCAAGCTCATGAAGAGCAAGTGTTTTATGATTCTTC
TGATATCTATGTTTGGCTGTACGACCCAATTAGCCCCAAAACATGGTTTTTAGGTGGCGT
GCTTCTTCTGGGAGTCATTGCTGCGACGCTCTTTCCTATTTGGCCACCAAGTGTCAGAGT
TGGTGTGTATTATCTGACAGTTGTTGGGGGATTTTTTGTTGGAGGAATCCTTGGCACTGC
ACTATTGCGAACCATATTATTTGGAGTAATATACGTTTTCACTTTGGGCACACACCATTT
GTGGGTCCTCCCTAATTTACTGGAGGATGTTGGGTTCTATGATTCATTTAAACCCCTGTA
TACTTATGAATACAAGGGCTCCAAGCAAGAAACTAAAGAAAGTAATGAGGATGAAGAAGA
AGAGAAAGAGGATCAGGATGAAAAGGATGACAAAGAAGAACCTAAAGATGATCCAATCAA
ATCAGAAGAAGAAGAAAAAATCGCTCGCTCCACCGATGAATTTTCGGACGAATCCGAACC
AGAACTTGAGGTTCAATATGAAGACAGTGATTATGAGATCATAGATGGTAAAGTGCCTGC
CAAAGAAGAGTAGAAACCCAAACGCTGCTTGGAAATTCTCAGACCCAGCTAATGCCAAAA
AACTGCTGCGATGTAACTGATGTAATTAGCTTGCCGCGACCAAAATACGAATACTGTGAG
TTACACATTAAACTGGTGCTCATTATGACAACCACCACGTGTAACAGAAGAGTTTCATTT
GTAGTATCGTATATTGCCTTCCATAGGGGACCATTAAAACCATGTTGTGTTAAACTGTAT
TGTATATACGCGTGTATATAGAGTAACCTACGGTGATGTAGGTTGATATGTTTGTTTTAG
GAAATGTTTGACAAAGTTTTATTGTACTGCCGCTAATAAAAGAATATTTCGGGTACA

InterProScan

PANTHER	Sec62 (IPR004728) - T[5-322] 2.9E-91
Gene3D	WH-like_DNA-bd_sf (IPR036388) - T[24-123] 9.2E-6
Pfam	Sec62 (IPR004728) - T[104-287] 1.8E-59

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SEC62_HUMAN	41.615 %	244	3.12E-78