- Clone 'citb042a02' >
- Transcript 'KH2012:KH.C8.506.v1....' >
- Molecular Tool 'Ci-Bra -3.5Kb/Ci-Su(H)DBD' >
- Transcript 'Harore.CG.MTP2014.S5...' >
- Transcript 'KH2012:KH.C1.359.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.359.v1.A.nonSL4-1
Possible name(s)
ZFX; ZFY; ZNF836
Gene model
Location
KhC1 [916,399 / 922,675]
Amino acid sequence
Length: 619
>KH.C1.359.v1.A.nonSL4-1
QISFTCKLCGYGGQVEDDIKQHIKTEHNDNEKVQTANTESTAKVKEENHVSNQRGNLKRK
CKTKNEDFVYYDQKTSKTQQNTNAEITSLEKQQCSKTDSCTELASDNLKFSDSMQCQVCK
RKFKSDEDLTIHIDSHYGDKFKCVMCDYENKNWTQVKIHMETHNHPSTNPCNECGETFAS
SFTLYSHRRYTHMGGEHLCDECGFHAASKYILLQHQLSKHSNHQCCQFCPYTSDNQRDLL
DHIKLRHENGFTCKYCVASVGNPQYKTKEDLNTHCSVAHPGSKHFFCQQCNYVAKLSHHL
RKHMNVHTGAQPYACRYDGCNFRTKDHKNRKQHELTKHKKPGDLVCRSCSFVTTNQNEWD
VHRAMYHMQEFKCDACDFKSNSQASIRRHRLSKHIPEDKMRYLCSYDGCSYITNLKENLQ
KHSLTHQEKDQPFMCPICRKTFEIRDNYKNHLQEHHPAVKIYVCEKCSFSTKNNQGYKRH
ILRHNATKSFHCKICRYKGRTKQLLQSHMKCRHNNHVPKNESTSTPEVKPLTSQMYPSSS
VHSPQLLGHSLLELQTPPATQVRLQSFPSTPHVTADVTNVADVTNVQLNHVTLNTPTTVI
IQPGESPMCYGTSPDLLAN
Nucleotide sequence
Length: 2,123
>KH2012:KH.C1.359.v1.A.nonSL4-1
CAAATTTCGTTTACTTGTAAACTATGTGGTTATGGTGGCCAAGTGGAAGACGACATTAAA
CAACACATTAAAACGGAACACAATGACAATGAAAAGGTCCAGACAGCGAACACAGAATCC
ACAGCCAAAGTGAAAGAGGAGAACCATGTATCAAATCAAAGAGGGAATTTAAAGAGAAAA
TGTAAAACGAAGAATGAAGACTTTGTATATTACGACCAGAAAACAAGCAAAACTCAACAA
AACACCAATGCTGAGATTACCTCATTGGAAAAGCAGCAATGTTCTAAAACAGATTCATGT
ACTGAGCTTGCTTCTGATAATTTGAAGTTTTCTGACTCAATGCAATGCCAAGTTTGTAAA
AGAAAATTTAAATCAGATGAGGACCTAACAATACACATAGACTCACATTATGGTGACAAG
TTTAAATGTGTGATGTGCGATTATGAAAACAAAAATTGGACCCAAGTGAAAATACACATG
GAGACTCACAACCATCCTTCCACCAACCCTTGTAATGAATGTGGAGAAACATTCGCAAGT
TCTTTTACACTTTATAGTCATAGGAGATACACACATATGGGTGGCGAGCACTTATGTGAT
GAATGTGGTTTCCATGCAGCGTCTAAATATATTTTACTTCAACATCAGTTATCTAAGCAT
TCCAATCACCAGTGTTGCCAGTTCTGTCCATATACCTCAGATAATCAGAGAGATTTATTA
GACCACATCAAACTACGACATGAGAATGGTTTCACTTGCAAGTATTGCGTGGCTTCAGTG
GGGAATCCACAGTATAAGACAAAGGAGGATTTGAACACACACTGTAGTGTTGCACATCCT
GGTTCTAAACATTTCTTCTGCCAGCAATGTAATTATGTAGCAAAATTGAGCCACCACTTA
CGGAAACACATGAATGTTCATACAGGAGCTCAACCTTACGCTTGTCGTTATGATGGGTGT
AACTTTAGAACTAAAGACCATAAAAACAGGAAGCAGCATGAGTTAACAAAACATAAGAAA
CCCGGTGACTTGGTTTGCCGTTCATGTAGTTTTGTTACAACAAATCAAAATGAGTGGGAC
GTGCATAGAGCGATGTATCATATGCAGGAGTTTAAATGCGACGCTTGTGATTTTAAATCA
AATAGTCAAGCTTCAATACGTCGTCATCGTCTGTCAAAACACATTCCTGAAGATAAAATG
AGATATCTATGTTCGTATGACGGCTGCAGTTACATCACTAATTTAAAAGAGAATTTACAA
AAGCATTCCTTAACGCACCAGGAGAAAGATCAGCCATTTATGTGCCCTATATGTCGAAAA
ACTTTTGAAATCCGAGACAATTATAAAAATCACCTGCAAGAACATCACCCCGCAGTTAAG
ATATACGTCTGCGAGAAATGTTCGTTTTCAACCAAGAATAACCAAGGATATAAACGCCAC
ATCCTACGTCACAATGCTACTAAAAGTTTCCATTGCAAGATATGCCGTTATAAAGGACGT
ACGAAACAATTATTACAAAGTCACATGAAATGTAGACATAATAATCATGTACCAAAGAAT
GAATCCACAAGTACGCCAGAGGTGAAACCATTAACCTCACAAATGTATCCTTCTAGTTCT
GTGCATTCACCCCAGCTGCTTGGACATTCTTTATTGGAGCTTCAGACACCTCCTGCTACA
CAAGTTCGTCTGCAATCATTCCCTTCAACTCCGCACGTCACTGCTGACGTCACAAACGTT
GCTGACGTCACAAACGTACAGTTAAACCACGTGACGTTAAACACTCCTACCACTGTGATC
ATACAGCCAGGGGAATCGCCGATGTGCTACGGGACCTCACCCGACTTATTGGCCAATTAA
CATATAGTGGGATGGGGGAAGATGGGACACCTTCGGCGCATAATATCCGAATATCCTGAT
CGTGTTTTAAACAATTAACAACGGTCTATGGGAGTCTTGAGCATATAGTTTTATAATTCT
TTGAATGTTCCTTGTTTACTACCACATTGGACGAGAAAATCGAGTTAAAATGTGTCCCAA
CTTCCCCCACCCTACTATATATTGCAACGTTGATATATGCCGTTATTTTATGATGTGAAT
GAAATAAACGATCTTGCACTAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[4-27] 0.57 - T[114-136] 0.31 - T[141-163] 0.14 - T[169-192] 0.14 - T[197-220] 3.0 - T[224-247] 0.48 - T[251-279] 32.0 - T[285-307] 0.31 - T[313-338] 0.42 - T[344-367] 9.9 - T[371-394] 0.052 - T[402-426] 0.085 - T[433-455] 0.006 - T[462-484] 0.016 - T[490-513] 0.28 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[114-141] 10.762 - T[169-197] 11.635 - T[285-312] 11.614 - T[433-461] 9.536 - T[490-518] 8.704 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[116-136] . - T[171-192] . - T[435-456] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[140-189] 3.82E-7 - T[279-327] 1.18E-7 - T[416-468] 5.8E-8 - T[460-510] 1.39E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 26.854 % | 110 | 6.16E-25 |
| ZFY_HUMAN | 25.799 % | 122 | 4.54E-29 |
| ZFX_HUMAN | 25.4 % | 124 | 1.17E-29 |