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  1. Transcript 'Phmamm.CG.MTP2014.S4...'
  2. Transcript 'Phfumi.CG.MTP2014.S7...'
  3. EST 'AHC0AAA224YC11_RM1'
  4. Transcript 'KH2012:KH.S423.8.v1....'
  5. Transcript 'KH2012:KH.C1.368.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.368.v1.A.SL1-1

Possible name(s)

GRTP1; TBC1D10C; TBC1D2

Location

KhC1 [3,367,328 / 3,374,003]

Sequences

Amino acid sequence

Length: 351

>KH.C1.368.v1.A.SL1-1
HAMQNTAVNMNGKNTSTVGKLSKVDPHGFERGDDFDYATYEQFESEYLTVLAHRTMRWDK
MMKNGTKMKITDGGAVKRFCRKGIPSSYRPMVWMNLSGAQEKMGNSLDLYEKLLETGCSN
DLELIELIKTDLDRTFPDNVYFNSKMGDDKRQSLYNILLAYGRRSPEVGYCQGINYVAAL
ILLVVKDEEKSFWLLSTLLDDILPHYYTKSMVSLRAEFKVLEDLVRQKYPECQQVMDEAK
VPWMLVASKWFICLFIDVIPIETVLRIWDCLFVEGSKILMRAALCIIHKNQEKLKACRNM
PEIVTLFKNIQNDTAMLRCHDFMKNCFETTNPLSKSEIRKLRVKHTETLKQ

Nucleotide sequence

Length: 2,051

>KH2012:KH.C1.368.v1.A.SL1-1
AAAAATGTTTATTTCATTGTAAATAAGTTAAAGTGTAGTATTTGTTAATGTATGACATGC
TATGCAAAATACAGCAGTCAACATGAATGGCAAGAATACCTCAACAGTGGGAAAATTAAG
TAAAGTTGACCCACATGGATTTGAAAGGGGCGATGACTTTGATTATGCAACATATGAACA
GTTTGAATCTGAATACCTCACTGTATTAGCACACCGGACCATGCGTTGGGATAAAATGAT
GAAAAATGGAACAAAAATGAAAATAACAGATGGAGGGGCAGTTAAAAGATTCTGCAGAAA
AGGCATCCCATCAAGCTATAGACCAATGGTTTGGATGAATCTTAGCGGAGCCCAAGAAAA
GATGGGAAATAGTTTAGATTTGTATGAAAAATTACTCGAAACAGGTTGCTCAAATGATCT
TGAATTGATTGAATTAATCAAAACTGACCTGGATCGAACTTTCCCTGATAACGTTTATTT
CAATTCTAAAATGGGAGACGACAAACGACAATCACTCTACAACATTCTGCTTGCTTATGG
AAGAAGAAGTCCCGAAGTTGGTTATTGTCAGGGAATAAACTACGTAGCAGCATTAATCTT
GCTGGTTGTAAAAGATGAAGAAAAGTCATTTTGGTTGCTGAGCACGTTATTAGATGATAT
ATTACCTCATTACTACACCAAATCAATGGTCAGTCTCAGGGCGGAGTTTAAAGTATTAGA
AGACCTTGTAAGGCAAAAATATCCTGAATGTCAACAAGTTATGGATGAAGCAAAAGTCCC
GTGGATGCTCGTTGCTTCAAAGTGGTTTATTTGTCTTTTTATTGATGTCATTCCTATTGA
GACAGTACTGAGGATATGGGATTGCCTATTTGTTGAAGGGTCAAAGATTTTGATGAGAGC
AGCACTTTGTATTATACATAAGAACCAAGAGAAGCTAAAAGCTTGTAGAAATATGCCAGA
GATTGTAACTTTGTTTAAAAATATTCAAAATGATACTGCTATGCTTCGTTGCCATGATTT
TATGAAGAATTGCTTTGAAACCACCAACCCGCTCTCAAAGTCAGAAATACGGAAGCTCAG
AGTAAAACATACAGAAACTTTAAAGCAATAAGATTCAGTCTTACTAATGTGGTTTTATAT
AATTTTAACTTTTAGTTTTCAGTGGTTGTAACTTTTATGTTGGTTTTATTTTTAATGTGC
AATTTTAAATACATCTTTATATCTTCATTTAATTTAAGAATAATTATTTTTATTCTTTTT
TATATGTAATTTTTTCATATGTAATATTAAAGAATTTGAAGTATGGTGCTTTATTAATGT
CGGATATTTTAACTATATTAATTGTCGTCTGTGGGACTTGTATTTTCTTGTGCAAGACCC
TTGACATTTATTGCTCTAAATTCCTACCATAAAAAGGCAGAAACCAGTAACTCACAAAGT
TATCTACATGGTAACTCCAAACTCATAAGCAGGTATATAAGACCATGTGTTATATTGACC
GTTTCTCCCACGCCATGTAAGGATAAACAAGTGTCTTCGTTCATTAACTATTAAACATTC
TCATTCCATGTTAATAATATCTATGAGTTTAAGATGTTGCAAAAGTTACTTATACATTTT
TATGTTTAAATGCATCTCCAGTTTTTATAGCACACTTAATGATATATTTAGTAGTGATGT
TAGGTCATACAGATAAAAAAAACTCTTTTCTAGATTTTTTTCGTGTAGTTTATTAATGTG
TAAGTGTTTAATTCACAATAACAGCATAATAAGATCAGACTGCACATGGAAAACTTAACT
GATTCGACCTGTTTAGCAAAATACAGCTATAAATAAATGTTTTAATTAGTTACTGTGCGA
TTTTAAGGTGTTGCAATATTTTGATTTTTTATAAACAAACCCTGTGTTTTTCATATATAA
TGGATATCATTCCAATTCTGTTATTGTTATGTTGTGTGCATCATAAATTTAAAGGTTGCA
ATATTTTGTACCATTTCCATAAAAAATGTTTAAACCTTAATTCAATAAAGATATACATAT
ATATATATAAA

InterProScan

SUPERFAMILY
Rab-GTPase_TBC_sf (IPR035969) - T[56-231] 3.66E-43 - T[214-327] 4.45E-26
SMART
Rab-GTPase-TBC_dom (IPR000195) - T[80-298] 1.2E-58
ProSiteProfiles
Rab-GTPase-TBC_dom (IPR000195) - T[83-275] 37.494
Pfam
Rab-GTPase-TBC_dom (IPR000195) - T[87-294] 3.2E-55

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TBD2A_HUMAN 28.655 % 159 3.14E-43
TB10C_HUMAN 31.613 % 152 2.73E-42
GRTP1_HUMAN 44.272 % 305 1.29E-102





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