Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 525

>KH.C1.374.v1.A.SL2-1
KMNGPGQQRRHPPAQNVPSSLLTDSENKTVFHMLGRKCVTLATGVVQVYLADGSGSKWQK
RCTGVCCFVKDNPMRSYFIRVYSLKNESQIWEQELYNQFKYNTPRSYFHTFDTDKCRAGL
NFANEAEASKFKQVVEEKIRQKQEKKQAKSRVNSVRSPNSALPSPPAAVHQQQQSSYNQQ
PAAPVHVEIKPQIEDGKKAKKGKKKKGKLTKADISMPSGFKHVGHVGWDPNKGFDTNNMD
PDVKELFNNAGVTEDDMHDKEKAQFIYDFIEKRGGIDAVKQEQKQRGAPPPPPQRGTGGG
PPPPPPQRGGPPPPPRKDASRSQPPPPHRSQGPPPPPPDRGNRQAQTPQPPRGREPPVLG
GRMSHPPPPPRAPESIPPPPPPSASYAPPPPPSMPSNVPPPPPPPPPSSSAPPPPPPATG
MGRGALLQQIRQGTGLKSASEPVKTTNRPAATGRDALLDDIRKGGIGGLKSVSHEQNDKP
VASPPPEEGLAGALARALQKRENAIHSDSESDSDNEDFDDEEWSD

Nucleotide sequence

Length: 2,114

>KH2012:KH.C1.374.v1.A.SL2-1
CTTACGCCTAATAGTAAATAAATATATTTATATTTAATAGTTTTTAAGGCTTAGTGTTTG
GTAAAAAATGAATGGACCAGGGCAGCAGCGAAGGCATCCACCTGCACAAAATGTTCCGTC
ATCTCTTCTTACTGATAGTGAAAACAAAACCGTGTTCCACATGCTTGGAAGAAAATGTGT
GACTCTTGCAACTGGTGTCGTACAAGTATATCTTGCTGATGGTTCTGGTAGCAAATGGCA
GAAGAGATGCACAGGAGTTTGTTGCTTTGTCAAAGATAATCCCATGCGTTCTTACTTTAT
CCGAGTTTACAGTTTAAAAAATGAATCACAGATCTGGGAACAAGAGTTATACAACCAGTT
TAAGTACAATACTCCACGTTCATACTTTCACACATTTGATACGGATAAATGCCGTGCTGG
GCTTAACTTTGCCAATGAAGCAGAGGCAAGCAAATTCAAGCAAGTGGTCGAGGAAAAAAT
TCGACAAAAGCAAGAGAAGAAACAAGCAAAAAGCAGGGTAAACTCAGTTCGGAGCCCAAA
TTCAGCTTTACCCTCTCCCCCTGCAGCGGTCCATCAGCAGCAACAATCATCTTACAACCA
ACAACCTGCTGCTCCTGTTCATGTGGAAATAAAACCTCAGATTGAAGATGGAAAGAAGGC
AAAGAAAGGGAAAAAGAAAAAGGGAAAATTAACAAAAGCAGATATCAGTATGCCATCAGG
ATTCAAGCATGTTGGGCATGTGGGTTGGGATCCAAACAAGGGATTCGACACCAACAATAT
GGATCCAGATGTGAAGGAATTATTCAATAACGCTGGTGTCACAGAGGATGATATGCATGA
TAAAGAGAAAGCTCAGTTTATCTACGATTTCATTGAGAAACGAGGGGGAATAGATGCTGT
TAAACAAGAACAGAAGCAAAGAGGTGCTCCTCCTCCTCCACCACAGAGAGGAACAGGAGG
AGGTCCACCACCCCCGCCCCCACAAAGAGGAGGACCCCCTCCACCTCCACGAAAAGATGC
TTCACGATCTCAACCACCACCACCACATAGGAGCCAAGGTCCTCCTCCTCCACCTCCTGA
CCGAGGAAATCGTCAAGCTCAGACACCTCAACCTCCGAGAGGTCGTGAACCTCCAGTTCT
TGGAGGTAGGATGAGCCATCCACCTCCACCACCCCGTGCTCCAGAAAGCATTCCTCCCCC
GCCCCCACCATCTGCATCATATGCCCCACCCCCTCCTCCCTCAATGCCATCTAATGTTCC
TCCTCCACCCCCGCCTCCACCACCAAGCTCTTCTGCTCCACCACCTCCTCCTCCTGCCAC
TGGTATGGGCCGTGGAGCATTGCTGCAGCAGATAAGACAAGGGACCGGTTTGAAATCAGC
ATCTGAACCTGTTAAGACCACGAACCGTCCGGCTGCTACCGGTCGTGATGCGTTGTTGGA
TGATATAAGGAAAGGTGGAATTGGTGGATTGAAATCGGTATCCCATGAACAGAACGATAA
ACCAGTAGCTTCACCTCCTCCAGAAGAGGGTTTAGCTGGTGCCCTTGCTCGTGCTTTGCA
GAAGCGAGAAAATGCAATTCATTCAGATTCTGAATCGGATTCTGATAATGAAGATTTTGA
TGATGAGGAATGGAGTGATTAGAAATATTTAAAGATGAATGAAATGGTTTTATTTTGTGA
TTAATATTGCGGTATTGGCAATCACATAATTTAAACACTGTCATCTATATATTCCAGCGT
ATAGTGAACATACCATGCAAATATAATTATGTGGAACAGTGCCTTTAGTAAAGCAGTCAA
GTTATTAAATACAACATGGAAAATAATTATTATAATATCAGATATCAGGCTACCATTATG
CTTGCATCTGTCCACCAAATCACATTTGGAGAAATGGTTACCATACCTGACATTGTGCGT
TTTGCATGGTGTGTATTACCAAGCTGGATAGTTTTGATTGTATCTGTATCTCGTATGTAT
ATATAATAATGTTATACAATATTTACTTGGTTTAAACAGCTTGCGTTATATTAATTAATG
TTGAAATTGTTATTAACTAAACTGCAACTGCGTTATTGTAATTACTGCAACAAATATAAG
TGATCCGATCTGGA

InterProScan

Gene3D	PH-like_dom_sf (IPR011993) - T[6-151] 1.0E-47
PANTHER	N-WASP (IPR030214) - T[14-525] 2.6E-128
Pfam	WH1/EVH1_dom (IPR000697) - T[31-138] 5.7E-36
SMART	WH1/EVH1_dom (IPR000697) - T[34-139] 8.7E-36
ProSiteProfiles	WH1/EVH1_dom (IPR000697) - T[34-142] 28.804
CDD	WASPfam_EVH1 (IPR033927) - T[40-139] 1.78918E-48
CDD	CRIB_dom (IPR000095) - T[212-254] 8.68401E-12
Pfam	CRIB_dom (IPR000095) - T[213-271] 8.3E-16
SMART	CRIB_dom (IPR000095) - T[214-250] 6.1E-7
ProSiteProfiles	CRIB_dom (IPR000095) - T[214-227] 8.572
Gene3D	CRIB_dom_sf (IPR036936) - T[215-286] 8.8E-30 - T[443-516] 2.1E-6
SUPERFAMILY	WASP_C (IPR011026) - T[218-316] 3.66E-11
Pfam	WH2_dom (IPR003124) - T[421-441] 3.1E-5 - T[451-472] 4.2E-6
SMART	WH2_dom (IPR003124) - T[422-439] 0.099 - T[453-472] 0.16
ProSiteProfiles	WH2_dom (IPR003124) - T[422-439] 9.073 - T[453-472] 8.797