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  1. Transcript 'KH2012:KH.C1.380.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.380.v1.A.nonSL3-1

Possible name(s)

CHSY1; CHSY3; CSGALNACT1

Gene model

KH2012:KH.C1.380

Location

KhC1 [5,740,324 / 5,746,028]

Sequences

Amino acid sequence

Length: 840

>KH.C1.380.v1.A.nonSL3-1
LTANQCSRRGGLEKCHSSAMRKRRLVQNTLRLVSGYACGLLLHYFLLSSKPKVCNEIRND
VLIRGGKRNVVERHSSPVLPQSNIYLGMMSAEKFIDNRVQRALDTWLQKGSWKVEVFADA
TPDSLQVPAGLDFNIVTLRSVDDAAYPPQKKCFMMLRHMYDHHIDNYDWFMRVDDDVYMD
FPRLSKLLNTINSSMPVFFGTPGFGMDPDDGIEDGMFYLMGGPGMIFSRGLLLELRAHFS
HCIQHMFSPHEDVEIGRCVWKHAKKAKIPIAWETIEFFYQQYDKNTGAVTNVVMADTTEQ
RTAKTVAYHAVKKHDLLYTLHRQVLERRIKKLLNETAKLKREIQAMQTIQNMKEISSLTP
YSKSSPLPYLLGSNTEMTVLSKSRLSHWPITAAWLPQNPMIPRGASTIPAIFWDKYYRHQ
VDSVIPARGHQGKEQPTLLKYLSEIENGILKKSCPHLSSNPQFTHGYLWVLPQHGAFISV
AHKGLVKGEYSYCTTHVQVSFAVTLLGEKDHPLSEHPLIAPSLVKRQSLVGYFVGEEIPP
ARKRLHHHSNTMVRYQEPVLPVSFDSSKDRVLFVIPLHGRYRALELFMERYKRDFLNPLK
EGKIANTLSGNVQLVIVLLGARGDEHDMNRASAYLLHSYQQEFGTSLIRYHIADTGKRQF
SRGAGLQLGSLVAGINDIVFFMDIDMIVTPNLVAQCRRNVKHGKQAWYPIPYSQYDPDRH
GARETIRQTPLTLEEDRGFWRDFGYGIACFYNTDFVSSGGFDLSIEGWGEEDVRLYKAIL
ASGVDVFRSKQSDLVHIYHTKHCDQRLVGEQARSCHRTKASHYASQMCLAKTYFQRNNLS

Nucleotide sequence

Length: 2,962

>KH2012:KH.C1.380.v1.A.nonSL3-1
ATTGACAGCAAACCAATGTAGTAGACGTGGAGGGTTGGAGAAGTGCCACAGCAGTGCGAT
GAGGAAAAGAAGATTGGTTCAAAATACACTTCGTTTGGTATCTGGTTATGCCTGTGGACT
ATTACTTCACTACTTCTTACTTAGTTCGAAGCCTAAGGTTTGCAACGAAATTCGAAACGA
CGTGTTAATACGTGGCGGCAAACGAAATGTTGTGGAAAGGCATTCGTCGCCTGTTCTGCC
TCAATCTAATATATATTTAGGCATGATGTCAGCAGAAAAATTTATCGACAATCGTGTCCA
GAGAGCCTTGGATACTTGGCTGCAGAAGGGAAGTTGGAAGGTGGAAGTATTTGCTGATGC
TACACCCGATAGTCTGCAAGTACCTGCTGGTCTTGACTTCAATATTGTAACGCTTCGATC
AGTGGATGACGCAGCCTACCCACCACAGAAGAAATGCTTCATGATGTTACGTCATATGTA
CGACCACCATATTGATAATTATGATTGGTTTATGAGAGTGGACGATGACGTTTACATGGA
TTTTCCACGACTTTCAAAGCTTCTGAACACAATAAACAGCAGCATGCCTGTATTTTTCGG
TACGCCTGGATTTGGAATGGATCCAGATGATGGAATTGAGGATGGAATGTTTTACTTGAT
GGGTGGTCCGGGAATGATATTCAGCAGAGGATTACTTCTTGAACTGCGTGCGCATTTCAG
TCATTGTATTCAACATATGTTTTCACCTCATGAGGATGTAGAGATAGGACGCTGTGTGTG
GAAACACGCGAAAAAGGCAAAAATCCCAATTGCGTGGGAGACTATTGAATTCTTTTATCA
GCAATATGATAAAAACACCGGCGCAGTGACTAACGTAGTGATGGCTGACACTACTGAACA
AAGGACGGCCAAAACTGTTGCTTACCATGCTGTGAAAAAACATGATTTGCTATATACTCT
GCACAGGCAGGTTTTGGAAAGAAGAATTAAAAAACTTCTTAATGAAACTGCCAAATTGAA
GAGGGAGATACAAGCCATGCAAACTATTCAAAATATGAAAGAGATTTCAAGTCTCACGCC
ATATTCCAAATCTTCCCCCCTTCCCTACCTACTTGGAAGCAACACGGAAATGACAGTTCT
TTCAAAATCAAGATTAAGTCACTGGCCAATCACAGCTGCTTGGCTTCCACAGAACCCTAT
GATACCACGGGGTGCTTCAACGATACCAGCAATATTCTGGGACAAATATTACAGACACCA
AGTAGACTCTGTAATCCCAGCAAGAGGTCATCAAGGTAAAGAGCAACCTACACTTCTTAA
ATATCTCAGTGAAATAGAAAATGGGATTTTGAAGAAGTCGTGTCCACACTTGTCTTCCAA
CCCACAGTTCACACACGGTTATTTGTGGGTGTTGCCTCAACATGGAGCCTTCATTTCTGT
TGCTCATAAAGGCTTGGTGAAAGGAGAATATTCGTATTGCACCACGCATGTACAAGTATC
ATTCGCTGTCACATTATTGGGGGAGAAAGATCACCCGTTGTCAGAACATCCATTAATTGC
ACCTTCACTTGTTAAACGACAAAGTTTAGTTGGATATTTTGTTGGTGAAGAAATCCCACC
AGCCAGGAAACGATTGCATCATCATTCTAACACCATGGTTCGATATCAAGAACCTGTCCT
TCCTGTTTCATTTGATTCAAGCAAAGACCGTGTTCTGTTTGTTATTCCCTTACATGGAAG
ATACAGAGCCCTTGAACTCTTTATGGAGAGGTACAAACGTGACTTTTTAAATCCCTTAAA
AGAAGGAAAAATAGCCAACACACTGTCTGGGAACGTGCAGTTGGTGATTGTATTATTAGG
AGCACGAGGGGATGAACATGATATGAATCGAGCGTCTGCGTATTTATTACATTCCTACCA
ACAAGAGTTTGGAACTTCACTGATCAGATACCACATTGCTGATACGGGCAAAAGGCAGTT
CTCACGTGGTGCAGGATTGCAACTTGGTTCACTCGTGGCTGGAATAAATGACATTGTTTT
CTTCATGGACATCGACATGATCGTTACTCCAAACTTAGTTGCTCAATGCAGAAGAAATGT
AAAACACGGCAAGCAAGCGTGGTACCCTATACCTTACAGTCAATATGATCCCGACCGGCA
TGGTGCTCGTGAAACCATCCGACAAACTCCTCTTACTTTAGAGGAGGACCGAGGGTTCTG
GAGGGATTTCGGGTACGGGATCGCTTGTTTTTACAACACGGACTTCGTTTCAAGTGGAGG
TTTTGATCTCAGTATTGAAGGGTGGGGGGAGGAAGATGTCAGACTTTACAAAGCAATTCT
TGCCTCCGGTGTGGATGTCTTTAGATCCAAACAGTCTGACCTTGTACACATTTACCACAC
AAAGCACTGTGATCAAAGGTTAGTTGGTGAGCAGGCCAGATCATGTCACCGCACCAAAGC
CAGTCATTACGCCAGCCAAATGTGTCTTGCCAAAACCTATTTCCAACGTAATAACCTTAG
CTGATGTAATCACAATTAGACATCTAAAACAACAATATACCTCATCGTACTCCATATAGC
TACTATATTATTTAATGTACTTATTTTTATGATAAAAAGAATTTTGTATTTCAAAAATAA
TCTATAATAACTATACAGCCATATACATACAAGTATATTTAAATTACTCTTACTATTTGT
GTCTAAAGTATTTATTGTCAGTTATTATAACTTTTTATTTATTTTTAGACTTTAATTTAT
TTTTAACCTAATGATGATAATGAAATAATAGAGACTTTGATATAAAAGCCCAGATCACAA
TCGTGGAATATTTGTATTTTGTAAAGCACGAAACAGTAAGTGTTTTCTATTTTATTTAGT
TAATGGATATTTTCTTCTTGTGCTTTATGTTTTCTAAACCTATTAGCTGTATTATTGGTA
CTATATTCAATGAAATAAAGCG

InterProScan

SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[163-269] 4.84E-5 - T[551-594] 1.24E-17 - T[655-821] 1.24E-17
Pfam
Chond_GalNAc (IPR008428) - T[238-829] 2.0E-126

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 34.657 % 179 8.86E-47
CHSS1_HUMAN 30.102 % 320 6.02E-97
CGAT1_HUMAN 32.234 % 150 3.1E-38