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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S534.1.v1....'
  2. Transcript 'KH2012:KH.C2.703.v1....'
  3. Transcript 'Phfumi.CG.MTP2014.S2...'
  4. Transcript 'Haaura.CG.MTP2014.S1...'
  5. Transcript 'KH2012:KH.C1.394.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.nonSL5-1

Possible name(s)

LSM12

Location

KhC1 [7,113,739 / 7,118,241]

Sequences

Amino acid sequence

Length: 201

>KH.C1.394.v1.A.nonSL5-1
HQIETKKQMQITSMAATAPSNDYFYPGSIVKCTTCHEEVIQGEVITFDHDSKILLLKQPS
SCGKSDLNNVSMLNLDLVKSVTLIKECDAPLPSLTPLSSSKLYQRFNEEVELKTMLAKAR
DSGVSTEGINLYLCLKKLLPCTLKEQSILVMDEVLVQPPYLTSDCVAKDAKIPNSQCLDH
VRDLVGRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,102

>KH2012:KH.C1.394.v1.A.nonSL5-1
ACATCAAATTGAAACCAAGAAACAAATGCAAATAACGAGTATGGCGGCAACTGCTCCGTC
TAATGACTACTTCTACCCTGGCAGTATTGTGAAATGCACCACCTGCCATGAAGAAGTTAT
TCAGGGGGAGGTCATCACTTTTGATCACGATTCCAAGATTTTGCTTCTAAAGCAACCATC
ATCATGTGGAAAGTCAGATCTTAATAATGTTTCTATGTTGAACCTTGACCTAGTAAAGAG
CGTGACATTAATCAAGGAATGCGACGCGCCTTTGCCTTCACTAACTCCACTCAGCTCATC
TAAGCTTTACCAGCGTTTCAATGAAGAGGTGGAGCTTAAGACAATGCTCGCTAAAGCACG
AGACTCTGGCGTTTCAACTGAGGGGATCAACCTATACTTGTGCCTCAAAAAACTCTTGCC
TTGCACTCTGAAAGAACAATCAATCCTTGTTATGGATGAAGTTCTGGTTCAGCCTCCATA
TTTGACTAGTGACTGTGTGGCTAAAGATGCAAAAATACCTAACAGTCAATGTCTAGACCA
TGTTCGAGATTTAGTTGGAAGATTCCATAAAGGCGATAAATCAAAGTTACAACAAGGAAA
TTCTTAACCATCTTGTTTATTTATTTTTATTCTTATCGCTTTGTCCTAATGTATCAGTGG
ACAAAGCTACGTAAAAGGATTAGTCACAAAACCATATTATCATTACATGTTCCTAAATGT
CAACCAATGTTCAAGGTTAATCAAGATTATCCTTGAAAAAAACAAAACAAAAAAGGTTTT
ACTTAAAATTCAAGTCCGCGCGAGACACTTTTAAAAAGTAGAACGCTTATGATTCAAGTT
AACGTGAAACAATATGTTATGTCATGAAATGGTTAGACCGTGCACGCAGTGCATCTCTGT
ACCATTAAAGGCGTTTCAAAATATTTTCAAAATAACGTTATTGAAAATGGCCTTTATGGT
TTTGGTGCTACGTTTACACTAAATATATGGCTTGACTCCTCCAACGTTTGGATCCAAGCA
ACTATGTGCAAACTTTTGGCCTTTACTCCAATCTGGTTTAGTTAAAGTTTGCTGTAAAAC
AATACAACACAGAGCGATTGTA

InterProScan

SMART
Anticodon-binding_dom (IPR019181) - T[93-184] 1.1E-8
Pfam
Anticodon-binding_dom (IPR019181) - T[96-182] 3.8E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LSM12_HUMAN 37.778 % 120 1.79E-34