Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.nonSL8-1

Possible name(s)

LSM12

Gene model

KH2012:KH.C1.394

Location

KhC1 [7,113,739 / 7,118,230]

Sequences

Amino acid sequence

Length: 197

>KH.C1.394.v1.A.nonSL8-1
TKKQMQITSMAATAPSNDYFYPGSIVKCTTCHEEVIQGEVITFDHDSKILLLKQPSSCGK
SDLNNVSMLNLDLVKSVTLIKECDAPLPSLTPLSSSKLYQRFNEEVELKTMLAKARDSGV
STEGINLYLCLKKLLPCTLKEQSILVMDEVLVQPPYLTSDCVAKDAKIPNSQCLDHVRDL
VGRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,091

>KH2012:KH.C1.394.v1.A.nonSL8-1
AAACCAAGAAACAAATGCAAATAACGAGTATGGCGGCAACTGCTCCGTCTAATGACTACT
TCTACCCTGGCAGTATTGTGAAATGCACCACCTGCCATGAAGAAGTTATTCAGGGGGAGG
TCATCACTTTTGATCACGATTCCAAGATTTTGCTTCTAAAGCAACCATCATCATGTGGAA
AGTCAGATCTTAATAATGTTTCTATGTTGAACCTTGACCTAGTAAAGAGCGTGACATTAA
TCAAGGAATGCGACGCGCCTTTGCCTTCACTAACTCCACTCAGCTCATCTAAGCTTTACC
AGCGTTTCAATGAAGAGGTGGAGCTTAAGACAATGCTCGCTAAAGCACGAGACTCTGGCG
TTTCAACTGAGGGGATCAACCTATACTTGTGCCTCAAAAAACTCTTGCCTTGCACTCTGA
AAGAACAATCAATCCTTGTTATGGATGAAGTTCTGGTTCAGCCTCCATATTTGACTAGTG
ACTGTGTGGCTAAAGATGCAAAAATACCTAACAGTCAATGTCTAGACCATGTTCGAGATT
TAGTTGGAAGATTCCATAAAGGCGATAAATCAAAGTTACAACAAGGAAATTCTTAACCAT
CTTGTTTATTTATTTTTATTCTTATCGCTTTGTCCTAATGTATCAGTGGACAAAGCTACG
TAAAAGGATTAGTCACAAAACCATATTATCATTACATGTTCCTAAATGTCAACCAATGTT
CAAGGTTAATCAAGATTATCCTTGAAAAAAACAAAACAAAAAAGGTTTTACTTAAAATTC
AAGTCCGCGCGAGACACTTTTAAAAAGTAGAACGCTTATGATTCAAGTTAACGTGAAACA
ATATGTTATGTCATGAAATGGTTAGACCGTGCACGCAGTGCATCTCTGTACCATTAAAGG
CGTTTCAAAATATTTTCAAAATAACGTTATTGAAAATGGCCTTTATGGTTTTGGTGCTAC
GTTTACACTAAATATATGGCTTGACTCCTCCAACGTTTGGATCCAAGCAACTATGTGCAA
ACTTTTGGCCTTTACTCCAATCTGGTTTAGTTAAAGTTTGCTGTAAAACAATACAACACA
GAGCGATTGTA

InterProScan

SMART	Anticodon-binding_dom (IPR019181) - T[89-180] 1.1E-8
Pfam	Anticodon-binding_dom (IPR019181) - T[92-178] 3.6E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LSM12_HUMAN	37.778 %	120	1.43E-34