Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.nonSL9-1

Possible name(s)

LSM12

Gene model

KH2012:KH.C1.394

Location

KhC1 [7,113,739 / 7,118,232]

Sequences

Amino acid sequence

Length: 198

>KH.C1.394.v1.A.nonSL9-1
ETKKQMQITSMAATAPSNDYFYPGSIVKCTTCHEEVIQGEVITFDHDSKILLLKQPSSCG
KSDLNNVSMLNLDLVKSVTLIKECDAPLPSLTPLSSSKLYQRFNEEVELKTMLAKARDSG
VSTEGINLYLCLKKLLPCTLKEQSILVMDEVLVQPPYLTSDCVAKDAKIPNSQCLDHVRD
LVGRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,093

>KH2012:KH.C1.394.v1.A.nonSL9-1
TGAAACCAAGAAACAAATGCAAATAACGAGTATGGCGGCAACTGCTCCGTCTAATGACTA
CTTCTACCCTGGCAGTATTGTGAAATGCACCACCTGCCATGAAGAAGTTATTCAGGGGGA
GGTCATCACTTTTGATCACGATTCCAAGATTTTGCTTCTAAAGCAACCATCATCATGTGG
AAAGTCAGATCTTAATAATGTTTCTATGTTGAACCTTGACCTAGTAAAGAGCGTGACATT
AATCAAGGAATGCGACGCGCCTTTGCCTTCACTAACTCCACTCAGCTCATCTAAGCTTTA
CCAGCGTTTCAATGAAGAGGTGGAGCTTAAGACAATGCTCGCTAAAGCACGAGACTCTGG
CGTTTCAACTGAGGGGATCAACCTATACTTGTGCCTCAAAAAACTCTTGCCTTGCACTCT
GAAAGAACAATCAATCCTTGTTATGGATGAAGTTCTGGTTCAGCCTCCATATTTGACTAG
TGACTGTGTGGCTAAAGATGCAAAAATACCTAACAGTCAATGTCTAGACCATGTTCGAGA
TTTAGTTGGAAGATTCCATAAAGGCGATAAATCAAAGTTACAACAAGGAAATTCTTAACC
ATCTTGTTTATTTATTTTTATTCTTATCGCTTTGTCCTAATGTATCAGTGGACAAAGCTA
CGTAAAAGGATTAGTCACAAAACCATATTATCATTACATGTTCCTAAATGTCAACCAATG
TTCAAGGTTAATCAAGATTATCCTTGAAAAAAACAAAACAAAAAAGGTTTTACTTAAAAT
TCAAGTCCGCGCGAGACACTTTTAAAAAGTAGAACGCTTATGATTCAAGTTAACGTGAAA
CAATATGTTATGTCATGAAATGGTTAGACCGTGCACGCAGTGCATCTCTGTACCATTAAA
GGCGTTTCAAAATATTTTCAAAATAACGTTATTGAAAATGGCCTTTATGGTTTTGGTGCT
ACGTTTACACTAAATATATGGCTTGACTCCTCCAACGTTTGGATCCAAGCAACTATGTGC
AAACTTTTGGCCTTTACTCCAATCTGGTTTAGTTAAAGTTTGCTGTAAAACAATACAACA
CAGAGCGATTGTA

InterProScan

SMART	Anticodon-binding_dom (IPR019181) - T[90-181] 1.1E-8
Pfam	Anticodon-binding_dom (IPR019181) - T[93-179] 3.7E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LSM12_HUMAN	37.778 %	120	1.56E-34