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TRANSCRIPT CARD

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  1. Clone 'cien102327' > 
  2. Transcript 'KH2012:KH.C1.394.v1....' > 
  3. Transcript 'KH2012:KH.C1.188.v2....' > 
  4. Transcript 'KH2012:KH.C11.459.v1...' > 
  5. Transcript 'KH2012:KH.C1.394.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.SL1-1

Possible name(s)

LSM12

Gene model

KH2012:KH.C1.394

Location

KhC1 [7,113,739 / 7,118,395]

Sequences

Amino acid sequence

Length: 225

>KH.C1.394.v1.A.SL1-1
IRSNKPSRIITCETAIHQPHCAQRHQIETKKQMQITSMAATAPSNDYFYPGSIVKCTTCH
EEVIQGEVITFDHDSKILLLKQPSSCGKSDLNNVSMLNLDLVKSVTLIKECDAPLPSLTP
LSSSKLYQRFNEEVELKTMLAKARDSGVSTEGINLYLCLKKLLPCTLKEQSILVMDEVLV
QPPYLTSDCVAKDAKIPNSQCLDHVRDLVGRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,256

>KH2012:KH.C1.394.v1.A.SL1-1
ATATTTAATTCTCATTCTTGAATTACTTTCCATTAGTTGTATATTTAAGTACTGCCGTAT
TTTTAAAGAACTTCACAAACTAAATTAGGAGTAATAAACCAAGCAGAATTATTACATGTG
AAACAGCAATTCATCAACCTCACTGTGCTCAGCGACATCAAATTGAAACCAAGAAACAAA
TGCAAATAACGAGTATGGCGGCAACTGCTCCGTCTAATGACTACTTCTACCCTGGCAGTA
TTGTGAAATGCACCACCTGCCATGAAGAAGTTATTCAGGGGGAGGTCATCACTTTTGATC
ACGATTCCAAGATTTTGCTTCTAAAGCAACCATCATCATGTGGAAAGTCAGATCTTAATA
ATGTTTCTATGTTGAACCTTGACCTAGTAAAGAGCGTGACATTAATCAAGGAATGCGACG
CGCCTTTGCCTTCACTAACTCCACTCAGCTCATCTAAGCTTTACCAGCGTTTCAATGAAG
AGGTGGAGCTTAAGACAATGCTCGCTAAAGCACGAGACTCTGGCGTTTCAACTGAGGGGA
TCAACCTATACTTGTGCCTCAAAAAACTCTTGCCTTGCACTCTGAAAGAACAATCAATCC
TTGTTATGGATGAAGTTCTGGTTCAGCCTCCATATTTGACTAGTGACTGTGTGGCTAAAG
ATGCAAAAATACCTAACAGTCAATGTCTAGACCATGTTCGAGATTTAGTTGGAAGATTCC
ATAAAGGCGATAAATCAAAGTTACAACAAGGAAATTCTTAACCATCTTGTTTATTTATTT
TTATTCTTATCGCTTTGTCCTAATGTATCAGTGGACAAAGCTACGTAAAAGGATTAGTCA
CAAAACCATATTATCATTACATGTTCCTAAATGTCAACCAATGTTCAAGGTTAATCAAGA
TTATCCTTGAAAAAAACAAAACAAAAAAGGTTTTACTTAAAATTCAAGTCCGCGCGAGAC
ACTTTTAAAAAGTAGAACGCTTATGATTCAAGTTAACGTGAAACAATATGTTATGTCATG
AAATGGTTAGACCGTGCACGCAGTGCATCTCTGTACCATTAAAGGCGTTTCAAAATATTT
TCAAAATAACGTTATTGAAAATGGCCTTTATGGTTTTGGTGCTACGTTTACACTAAATAT
ATGGCTTGACTCCTCCAACGTTTGGATCCAAGCAACTATGTGCAAACTTTTGGCCTTTAC
TCCAATCTGGTTTAGTTAAAGTTTGCTGTAAAACAATACAACACAGAGCGATTGTA

InterProScan

SMART
Anticodon-binding_dom (IPR019181) - T[117-208] 1.1E-8
Pfam
Anticodon-binding_dom (IPR019181) - T[120-206] 5.0E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LSM12_HUMAN 37.778 % 120 4.99E-34