Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.SL2-1

Possible name(s)

LSM12

Gene model

KH2012:KH.C1.394

Location

KhC1 [7,113,739 / 7,118,327]

Sequences

Amino acid sequence

Length: 225

>KH.C1.394.v1.A.SL2-1
IRSNKPSRIITCETAIHQPHCAQRHQIETKKQMQITSMAATAPSNDYFYPGSIVKCTTCH
EEVIQGEVITFDHDSKILLLKQPSSCGKSDLNNVSMLNLDLVKSVTLIKECDAPLPSLTP
LSSSKLYQRFNEEVELKTMLAKARDSGVSTEGINLYLCLKKLLPCTLKEQSILVMDEVLV
QPPYLTSDCVAKDAKIPNSQCLDHVRDLVGRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,188

>KH2012:KH.C1.394.v1.A.SL2-1
AACTTCACAAACTAAATTAGGAGTAATAAACCAAGCAGAATTATTACATGTGAAACAGCA
ATTCATCAACCTCACTGTGCTCAGCGACATCAAATTGAAACCAAGAAACAAATGCAAATA
ACGAGTATGGCGGCAACTGCTCCGTCTAATGACTACTTCTACCCTGGCAGTATTGTGAAA
TGCACCACCTGCCATGAAGAAGTTATTCAGGGGGAGGTCATCACTTTTGATCACGATTCC
AAGATTTTGCTTCTAAAGCAACCATCATCATGTGGAAAGTCAGATCTTAATAATGTTTCT
ATGTTGAACCTTGACCTAGTAAAGAGCGTGACATTAATCAAGGAATGCGACGCGCCTTTG
CCTTCACTAACTCCACTCAGCTCATCTAAGCTTTACCAGCGTTTCAATGAAGAGGTGGAG
CTTAAGACAATGCTCGCTAAAGCACGAGACTCTGGCGTTTCAACTGAGGGGATCAACCTA
TACTTGTGCCTCAAAAAACTCTTGCCTTGCACTCTGAAAGAACAATCAATCCTTGTTATG
GATGAAGTTCTGGTTCAGCCTCCATATTTGACTAGTGACTGTGTGGCTAAAGATGCAAAA
ATACCTAACAGTCAATGTCTAGACCATGTTCGAGATTTAGTTGGAAGATTCCATAAAGGC
GATAAATCAAAGTTACAACAAGGAAATTCTTAACCATCTTGTTTATTTATTTTTATTCTT
ATCGCTTTGTCCTAATGTATCAGTGGACAAAGCTACGTAAAAGGATTAGTCACAAAACCA
TATTATCATTACATGTTCCTAAATGTCAACCAATGTTCAAGGTTAATCAAGATTATCCTT
GAAAAAAACAAAACAAAAAAGGTTTTACTTAAAATTCAAGTCCGCGCGAGACACTTTTAA
AAAGTAGAACGCTTATGATTCAAGTTAACGTGAAACAATATGTTATGTCATGAAATGGTT
AGACCGTGCACGCAGTGCATCTCTGTACCATTAAAGGCGTTTCAAAATATTTTCAAAATA
ACGTTATTGAAAATGGCCTTTATGGTTTTGGTGCTACGTTTACACTAAATATATGGCTTG
ACTCCTCCAACGTTTGGATCCAAGCAACTATGTGCAAACTTTTGGCCTTTACTCCAATCT
GGTTTAGTTAAAGTTTGCTGTAAAACAATACAACACAGAGCGATTGTA

InterProScan

SMART	Anticodon-binding_dom (IPR019181) - T[117-208] 1.1E-8
Pfam	Anticodon-binding_dom (IPR019181) - T[120-206] 5.0E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LSM12_HUMAN	37.778 %	120	4.99E-34