- Transcript 'Phmamm.CG.MTP2014.S7...' >
- EST 'FF924234.1' >
- Transcript 'KH2012:KH.C1.398.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.398.v2.A.SL2-1
Possible name(s)
TCEA1; TCEA2; TCEA3
Gene model
Location
KhC1 [5,332,470 / 5,334,640]
Amino acid sequence
Length: 273
>KH.C1.398.v2.A.SL2-1
DNALDVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEVAIAAKQLIKGWKKLVSEPS
SASKKSEDNKKKEKPEPIISTNIRKTSTTKMEVSASSHTMDTSSLQSTGNSVRDKCREML
VRGLQTDNTSGHSDQQCAFLAAAIEEAIYSEFKDTGVKYKNRIRSRFSNLKDTRNSILRL
NVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQQNIKDHQMSVNEGTKTDMFVCGRCKG
RACTYNQLQTRSADEPMTTFVFCTECGNRWKFC
Nucleotide sequence
Length: 1,076
>KH2012:KH.C1.398.v2.A.SL2-1
GATAATGCCTTGGATGTCTTGAAGGCTCTGAAACAAATTCCAATAAACTTAGACACACTG
CAGAAAACTCGTATTGGTATGTCAGTTAATAATATAAGAAAACAAACTGCAAACGATGAG
GTTGCAATAGCAGCAAAACAACTTATAAAGGGTTGGAAGAAGTTGGTTTCAGAACCCAGT
TCAGCGTCAAAGAAATCTGAAGATAATAAAAAAAAGGAAAAACCCGAACCAATAATATCA
ACCAATATCCGAAAGACAAGCACAACAAAAATGGAAGTTTCTGCTTCATCTCACACAATG
GACACCTCATCACTTCAATCCACAGGAAATTCCGTTCGAGATAAATGTCGTGAAATGTTG
GTACGAGGATTGCAAACAGATAATACATCGGGCCACAGTGACCAACAATGTGCATTTCTT
GCTGCTGCTATTGAAGAAGCTATCTACTCTGAATTTAAAGATACAGGAGTGAAATACAAG
AACAGAATACGAAGCAGATTTAGTAACTTAAAAGACACCAGAAACTCCATCCTTCGACTG
AATGTTCTCAACGGTATTCTTAAGCCAGAACAAATCGCCAAAATGACCGCTGAGGAGATG
GCGAGTGACGAAATGAAAAAGAAAAGAGAGGAATACGAGCAACAGAACATCAAAGATCAT
CAGATGTCTGTCAACGAAGGAACGAAGACTGACATGTTCGTATGCGGTCGATGCAAAGGA
CGGGCATGCACATACAATCAGCTGCAAACGAGAAGTGCTGACGAGCCCATGACAACTTTC
GTCTTCTGTACTGAATGTGGAAACAGATGGAAATTCTGTTAAGACTTTATCCTACTGTTA
TACTTTTTGTTTTTTTTTCTTATCGGCCATGAACCCACGGCAAAATGGTGACGATCTTGC
TCACTTGTCCCAGTCGACTTACCAGACATTTTAATTAGCGTTATTTATGAATGCCACTAA
ATTTGGATCTCTTTGGTTTTACGAAGCACCTGGTGCCATAACTTTACTTGGAAATAAAAT
AGAATGTGCGGTTTGTTTGGCATCGAAATCCTGCGACATCATAAAACAATTTAAAC
| Gene3D |
TFIIS/LEDGF_dom_sf (IPR035441) - T[1-73] 1.2E-20 |
| PIRSF |
TF_IIS-typ (IPR035100) - T[1-273] 7.0E-92 |
| ProSiteProfiles |
TFIIS_N (IPR017923) - T[1-59] 21.999 |
| SUPERFAMILY |
TFIIS/LEDGF_dom_sf (IPR035441) - T[2-71] 4.71E-19 |
| SMART |
TFIIS/CRSP70_N_sub (IPR003617) - T[2-58] 3.8E-9 |
| TIGRFAM |
TFSII (IPR006289) - T[3-273] 2.0E-87 |
| Pfam |
TFIIS_N (IPR017923) - T[5-56] 1.8E-12 |
| Gene3D |
TFIIS_cen_dom_sf (IPR036575) - T[97-202] 4.0E-35 |
| SUPERFAMILY |
TFIIS_cen_dom_sf (IPR036575) - T[97-204] 8.24E-32 |
| Pfam |
TFIIS_cen_dom (IPR003618) - T[110-220] 1.1E-37 |
| SMART |
TFIIS_cen_dom (IPR003618) - T[110-211] 8.6E-36 |
| ProSiteProfiles |
TFIIS_cen_dom (IPR003618) - T[112-228] 39.471 |
| ProSiteProfiles |
Znf_TFIIS (IPR001222) - T[231-271] 13.64 |
| SMART |
Znf_TFIIS (IPR001222) - T[233-272] 7.2E-19 |
| Pfam |
Znf_TFIIS (IPR001222) - T[234-271] 2.4E-17 |
| ProSitePatterns |
Znf_TFIIS (IPR001222) - T[235-270] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TCEA2_HUMAN | 47.67 % | 261 | 3.29E-87 |
| TCEA1_HUMAN | 53.684 % | 271 | 3.24E-91 |
| TCEA3_HUMAN | 42.154 % | 236 | 9.94E-77 |