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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA59YD05'
  2. Transcript 'KH2012:KH.C12.47.v2....'
  3. Transcript 'KH2012:KH.C1.398.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.398.v2.A.SL2-1

Possible name(s)

TCEA1; TCEA2; TCEA3

Location

KhC1 [5,332,470 / 5,334,640]

Sequences

Amino acid sequence

Length: 273

>KH.C1.398.v2.A.SL2-1
DNALDVLKALKQIPINLDTLQKTRIGMSVNNIRKQTANDEVAIAAKQLIKGWKKLVSEPS
SASKKSEDNKKKEKPEPIISTNIRKTSTTKMEVSASSHTMDTSSLQSTGNSVRDKCREML
VRGLQTDNTSGHSDQQCAFLAAAIEEAIYSEFKDTGVKYKNRIRSRFSNLKDTRNSILRL
NVLNGILKPEQIAKMTAEEMASDEMKKKREEYEQQNIKDHQMSVNEGTKTDMFVCGRCKG
RACTYNQLQTRSADEPMTTFVFCTECGNRWKFC

Nucleotide sequence

Length: 1,076

>KH2012:KH.C1.398.v2.A.SL2-1
GATAATGCCTTGGATGTCTTGAAGGCTCTGAAACAAATTCCAATAAACTTAGACACACTG
CAGAAAACTCGTATTGGTATGTCAGTTAATAATATAAGAAAACAAACTGCAAACGATGAG
GTTGCAATAGCAGCAAAACAACTTATAAAGGGTTGGAAGAAGTTGGTTTCAGAACCCAGT
TCAGCGTCAAAGAAATCTGAAGATAATAAAAAAAAGGAAAAACCCGAACCAATAATATCA
ACCAATATCCGAAAGACAAGCACAACAAAAATGGAAGTTTCTGCTTCATCTCACACAATG
GACACCTCATCACTTCAATCCACAGGAAATTCCGTTCGAGATAAATGTCGTGAAATGTTG
GTACGAGGATTGCAAACAGATAATACATCGGGCCACAGTGACCAACAATGTGCATTTCTT
GCTGCTGCTATTGAAGAAGCTATCTACTCTGAATTTAAAGATACAGGAGTGAAATACAAG
AACAGAATACGAAGCAGATTTAGTAACTTAAAAGACACCAGAAACTCCATCCTTCGACTG
AATGTTCTCAACGGTATTCTTAAGCCAGAACAAATCGCCAAAATGACCGCTGAGGAGATG
GCGAGTGACGAAATGAAAAAGAAAAGAGAGGAATACGAGCAACAGAACATCAAAGATCAT
CAGATGTCTGTCAACGAAGGAACGAAGACTGACATGTTCGTATGCGGTCGATGCAAAGGA
CGGGCATGCACATACAATCAGCTGCAAACGAGAAGTGCTGACGAGCCCATGACAACTTTC
GTCTTCTGTACTGAATGTGGAAACAGATGGAAATTCTGTTAAGACTTTATCCTACTGTTA
TACTTTTTGTTTTTTTTTCTTATCGGCCATGAACCCACGGCAAAATGGTGACGATCTTGC
TCACTTGTCCCAGTCGACTTACCAGACATTTTAATTAGCGTTATTTATGAATGCCACTAA
ATTTGGATCTCTTTGGTTTTACGAAGCACCTGGTGCCATAACTTTACTTGGAAATAAAAT
AGAATGTGCGGTTTGTTTGGCATCGAAATCCTGCGACATCATAAAACAATTTAAAC

InterProScan

Gene3D
TFIIS/LEDGF_dom_sf (IPR035441) - T[1-73] 1.2E-20
PIRSF
TF_IIS-typ (IPR035100) - T[1-273] 7.0E-92
ProSiteProfiles
TFIIS_N (IPR017923) - T[1-59] 21.999
SUPERFAMILY
TFIIS/LEDGF_dom_sf (IPR035441) - T[2-71] 4.71E-19
SMART
TFIIS/CRSP70_N_sub (IPR003617) - T[2-58] 3.8E-9
TIGRFAM
TFSII (IPR006289) - T[3-273] 2.0E-87
Pfam
TFIIS_N (IPR017923) - T[5-56] 1.8E-12
Gene3D
TFIIS_cen_dom_sf (IPR036575) - T[97-202] 4.0E-35
SUPERFAMILY
TFIIS_cen_dom_sf (IPR036575) - T[97-204] 8.24E-32
Pfam
TFIIS_cen_dom (IPR003618) - T[110-220] 1.1E-37
SMART
TFIIS_cen_dom (IPR003618) - T[110-211] 8.6E-36
ProSiteProfiles
TFIIS_cen_dom (IPR003618) - T[112-228] 39.471
ProSiteProfiles
Znf_TFIIS (IPR001222) - T[231-271] 13.64
SMART
Znf_TFIIS (IPR001222) - T[233-272] 7.2E-19
Pfam
Znf_TFIIS (IPR001222) - T[234-271] 2.4E-17
ProSitePatterns
Znf_TFIIS (IPR001222) - T[235-270] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TCEA2_HUMAN 47.67 % 261 3.29E-87
TCEA1_HUMAN 53.684 % 271 3.24E-91
TCEA3_HUMAN 42.154 % 236 9.94E-77