- Transcript 'KH2012:KH.C1.382.v1....' >
- Transcript 'KH2012:KH.C1.567.v2....' >
- Transcript 'KH2012:KH.C4.798.v1....' >
- Transcript 'KH2012:KH.C11.197.v1...' >
- Transcript 'KH2012:KH.C14.115.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.115.v2.A.nonSL3-3
Possible name(s)
SRSF12; SRSF3; SRSF7
Gene model
Location
KhC14 [2,962,761 / 2,965,048]
Amino acid sequence
Length: 351
>KH.C14.115.v2.A.nonSL3-3
FLPVRRFVKMSSRSFRASSDRKVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFA
YVLFEDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNR
GFRSDMRCYNCSETGHFARDCPRSRGVGRRRRSRSYSRSRSRSRSYSKSRSRSPRRKRSR
RSRSRSTSSAERKSRSPRKSSREDRRRRTRSDRSSRSRSKSEDKKGSRSRSRSRDKDRKS
RSRSKSVEYIEKRDSRSRSRSADKSKKSRSKSLDRSRDRSASRSRSRSRSPRGNKSKSRS
RSRTPVNGVENGNSPRNRSRSRSRSKDNAPEDERQKEHSRSPSPNRSDNEN
Nucleotide sequence
Length: 1,380
>KH2012:KH.C14.115.v2.A.nonSL3-3
AGATTTAGTTTTTACCAGTACGCAGATTTGTTAAAATGTCGTCGAGGTCATTTCGTGCGA
GCTCCGATCGAAAAGTTTACGTTGGCAATCTTGGAACGCACGCATCAAGAGAGGATCTTG
AAGAAGAATTCAGCTACTACGGAAGATTGGACAGCGTTTGGGTCGCAAGAAACCCTCCAG
GTTTTGCGTATGTTCTTTTCGAAGATGCCCGAGATGCAAAAGATGCCGTTCGTGGATTAG
ATGGAAAAATAATTTGCGATCGAAAAGTAAGAGTTGACATTTCAAACTCCCGAAGTACCG
GTCGGCCTGCACGACGTGGTCCTGCTCCATATGATAGATATGGAGGAGGAGGTGGTGGTG
GAAACCGAGGGTTTCGAAGCGATATGAGATGTTACAACTGCAGCGAGACCGGTCACTTTG
CACGTGATTGCCCAAGGTCTAGAGGTGTGGGTAGGCGTCGCCGCTCCCGCTCTTATTCTA
GGTCCCGTTCACGATCTCGATCCTACTCCAAGTCCAGATCTCGTAGTCCAAGGAGAAAGA
GATCACGCAGAAGTCGATCGCGCAGCACATCAAGTGCTGAGCGCAAAAGTCGCAGCCCAA
GAAAATCAAGTCGTGAAGATCGTCGACGTAGGACCAGATCTGATCGCTCCAGCCGTTCCA
GATCAAAATCGGAAGATAAGAAAGGTTCTCGTTCCCGTTCAAGAAGTCGTGACAAAGATC
GGAAGAGTCGCTCTCGATCCAAATCCGTGGAGTATATTGAGAAGAGGGATTCTAGAAGTC
GATCACGCAGTGCTGATAAATCAAAGAAGAGCAGATCAAAATCTCTGGATCGATCCAGGG
ATCGCAGTGCCTCAAGGAGCAGATCTCGTAGCAGGAGTCCTCGGGGTAATAAATCTAAAA
GTAGGTCCAGATCTCGTACCCCAGTGAATGGTGTCGAGAATGGAAATTCTCCACGGAATC
GCAGTAGATCTCGTTCTAGGAGCAAAGATAATGCACCCGAAGATGAGAGGCAAAAAGAAC
ATTCCAGATCACCGAGTCCCAATCGCTCTGATAATGAAAACTGATGATATTTTTAAAAAA
TTCGACCAACGCATAATTTCTGTTCAATGACAGAAATGGTTCATTTTTGTATCCGCTGAA
CTGCAAACATTCCTAAAACGTTTGGGATCTTTTTATCCGATAAACTGTAACTTTTACACA
TGATCATCAATAATTACAGTTTAAGTTTTAAGTTAATTTTATGAACACTAGATCTTTGTA
TTGTCACCATACTCGAAAATGCGTCATTTGAAAATCTTGTAAATTAGTTCGACCATCAAG
TGTAAATAAAACGTTTGTGTAGTTCATATAATATAAAGTTTTCAAAACGTTAAAACAAAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[9-123] 1.49E-27 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[15-95] 3.6E-22 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[21-94] 17.131 |
| SMART |
RRM_dom (IPR000504) - T[22-90] 4.3E-20 |
| Pfam |
RRM_dom (IPR000504) - T[23-88] 1.2E-14 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[120-147] 7.33E-7 |
| SMART |
Znf_CCHC (IPR001878) - T[127-143] 4.4E-5 |
| Pfam |
Znf_CCHC (IPR001878) - T[127-142] 8.7E-8 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[127-143] 11.07 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF3_HUMAN | 60.227 % | 109 | 7.56E-29 |
| SRSF7_HUMAN | 53.731 % | 134 | 1.75E-37 |