- Clone 'cien46974' >
- Transcript 'KH2012:KH.C14.115.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.115.v2.A.nonSL4-3
Possible name(s)
SRSF12; SRSF3; SRSF7
Gene model
Location
KhC14 [2,962,789 / 2,965,048]
Amino acid sequence
Length: 344
>KH.C14.115.v2.A.nonSL4-3
VKMSSRSFRASSDRKVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDA
RDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMR
CYNCSETGHFARDCPRSRGVGRRRRSRSYSRSRSRSRSYSKSRSRSPRRKRSRRSRSRST
SSAERKSRSPRKSSREDRRRRTRSDRSSRSRSKSEDKKGSRSRSRSRDKDRKSRSRSKSV
EYIEKRDSRSRSRSADKSKKSRSKSLDRSRDRSASRSRSRSRSPRGNKSKSRSRSRTPVN
GVENGNSPRNRSRSRSRSKDNAPEDERQKEHSRSPSPNRSDNEN
Nucleotide sequence
Length: 1,352
>KH2012:KH.C14.115.v2.A.nonSL4-3
TGTTAAAATGTCGTCGAGGTCATTTCGTGCGAGCTCCGATCGAAAAGTTTACGTTGGCAA
TCTTGGAACGCACGCATCAAGAGAGGATCTTGAAGAAGAATTCAGCTACTACGGAAGATT
GGACAGCGTTTGGGTCGCAAGAAACCCTCCAGGTTTTGCGTATGTTCTTTTCGAAGATGC
CCGAGATGCAAAAGATGCCGTTCGTGGATTAGATGGAAAAATAATTTGCGATCGAAAAGT
AAGAGTTGACATTTCAAACTCCCGAAGTACCGGTCGGCCTGCACGACGTGGTCCTGCTCC
ATATGATAGATATGGAGGAGGAGGTGGTGGTGGAAACCGAGGGTTTCGAAGCGATATGAG
ATGTTACAACTGCAGCGAGACCGGTCACTTTGCACGTGATTGCCCAAGGTCTAGAGGTGT
GGGTAGGCGTCGCCGCTCCCGCTCTTATTCTAGGTCCCGTTCACGATCTCGATCCTACTC
CAAGTCCAGATCTCGTAGTCCAAGGAGAAAGAGATCACGCAGAAGTCGATCGCGCAGCAC
ATCAAGTGCTGAGCGCAAAAGTCGCAGCCCAAGAAAATCAAGTCGTGAAGATCGTCGACG
TAGGACCAGATCTGATCGCTCCAGCCGTTCCAGATCAAAATCGGAAGATAAGAAAGGTTC
TCGTTCCCGTTCAAGAAGTCGTGACAAAGATCGGAAGAGTCGCTCTCGATCCAAATCCGT
GGAGTATATTGAGAAGAGGGATTCTAGAAGTCGATCACGCAGTGCTGATAAATCAAAGAA
GAGCAGATCAAAATCTCTGGATCGATCCAGGGATCGCAGTGCCTCAAGGAGCAGATCTCG
TAGCAGGAGTCCTCGGGGTAATAAATCTAAAAGTAGGTCCAGATCTCGTACCCCAGTGAA
TGGTGTCGAGAATGGAAATTCTCCACGGAATCGCAGTAGATCTCGTTCTAGGAGCAAAGA
TAATGCACCCGAAGATGAGAGGCAAAAAGAACATTCCAGATCACCGAGTCCCAATCGCTC
TGATAATGAAAACTGATGATATTTTTAAAAAATTCGACCAACGCATAATTTCTGTTCAAT
GACAGAAATGGTTCATTTTTGTATCCGCTGAACTGCAAACATTCCTAAAACGTTTGGGAT
CTTTTTATCCGATAAACTGTAACTTTTACACATGATCATCAATAATTACAGTTTAAGTTT
TAAGTTAATTTTATGAACACTAGATCTTTGTATTGTCACCATACTCGAAAATGCGTCATT
TGAAAATCTTGTAAATTAGTTCGACCATCAAGTGTAAATAAAACGTTTGTGTAGTTCATA
TAATATAAAGTTTTCAAAACGTTAAAACAAAA
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[7-116] 2.44E-27 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[8-88] 3.5E-22 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[14-87] 17.131 |
| SMART |
RRM_dom (IPR000504) - T[15-83] 4.3E-20 |
| Pfam |
RRM_dom (IPR000504) - T[16-81] 1.1E-14 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[113-140] 7.12E-7 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[120-136] 11.07 |
| Pfam |
Znf_CCHC (IPR001878) - T[120-135] 8.5E-8 |
| SMART |
Znf_CCHC (IPR001878) - T[120-136] 4.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF3_HUMAN | 60.227 % | 109 | 5.94E-29 |
| SRSF7_HUMAN | 53.731 % | 134 | 1.15E-37 |