- Transcript 'KH2012:KH.C14.115.v3...'
Transcript Model
Transcript Id
KH2012:KH.C14.115.v3.A.nonSL4-2
Possible name(s)
SRSF12; SRSF3; SRSF7
Gene model
Location
KhC14 [2,962,789 / 2,963,803]
Amino acid sequence
Length: 139
>KH.C14.115.v3.A.nonSL4-2
VKMSSRSFRASSDRKVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLFEDA
RDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRSDMR
CYNCSETGHFARDCPRSRG
Nucleotide sequence
Length: 805
>KH2012:KH.C14.115.v3.A.nonSL4-2
TGTTAAAATGTCGTCGAGGTCATTTCGTGCGAGCTCCGATCGAAAAGTTTACGTTGGCAA
TCTTGGAACGCACGCATCAAGAGAGGATCTTGAAGAAGAATTCAGCTACTACGGAAGATT
GGACAGCGTTTGGGTCGCAAGAAACCCTCCAGGTTTTGCGTATGTTCTTTTCGAAGATGC
CCGAGATGCAAAAGATGCCGTTCGTGGATTAGATGGAAAAATAATTTGCGATCGAAAAGT
AAGAGTTGACATTTCAAACTCCCGAAGTACCGGTCGGCCTGCACGACGTGGTCCTGCTCC
ATATGATAGATATGGAGGAGGAGGTGGTGGTGGAAACCGAGGGTTTCGAAGCGATATGAG
ATGTTACAACTGCAGCGAGACCGGTCACTTTGCACGTGATTGCCCAAGGTCTAGAGGGTA
AGCTTAAAATTGTTTTGTTTAATTGCGGTTACTTTATTATCTTGTTAGAAGTATAGGTTT
TAAGGTTTACTTTGATGATCCTTCAACCCAACAATCATTGATGTGAACATTGCGCTCTCT
TATGGCACAGCTGAGTATGGAAACCTCACCAAAATATAATATTATAATTTGAAACAATTC
ATAAGCTATTAATTTAATTCCAAACTTTGCCGTGTCAAACTTTTAACTGAGCATATCACT
GCCCTTCTAGGCTGATTTTCATGTCACCGAGTGTACATTATTGATACGAGGCCCATGTAC
GTGGTGCACAGTGGCTCAGAGCGCCTAATGAACGATAGAGGGCATGAACGATATGTGATC
GTGGTGCAGTGTGCGTTTTTGTTCG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[7-116] 2.17E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[8-88] 5.0E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[14-87] 17.131 |
| SMART |
RRM_dom (IPR000504) - T[15-83] 4.3E-20 |
| Pfam |
RRM_dom (IPR000504) - T[16-81] 1.9E-15 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[112-138] 6.07E-7 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[120-136] 11.07 |
| SMART |
Znf_CCHC (IPR001878) - T[120-136] 4.4E-5 |
| Pfam |
Znf_CCHC (IPR001878) - T[120-135] 2.6E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF3_HUMAN | 60.227 % | 104 | 1.55E-29 |
| SRSF7_HUMAN | 54.615 % | 127 | 2.09E-37 |