- Transcript 'KH2012:KH.C5.42.v2.A...' >
- Transcript 'KH2012:KH.C14.115.v3...'
Transcript Model
Transcript Id
KH2012:KH.C14.115.v3.A.nonSL5-2
Possible name(s)
SRSF12; SRSF3; SRSF7
Gene model
Location
KhC14 [2,962,780 / 2,963,803]
Amino acid sequence
Length: 142
>KH.C14.115.v3.A.nonSL5-2
RRFVKMSSRSFRASSDRKVYVGNLGTHASREDLEEEFSYYGRLDSVWVARNPPGFAYVLF
EDARDAKDAVRGLDGKIICDRKVRVDISNSRSTGRPARRGPAPYDRYGGGGGGGNRGFRS
DMRCYNCSETGHFARDCPRSRG
Nucleotide sequence
Length: 814
>KH2012:KH.C14.115.v3.A.nonSL5-2
ACGCAGATTTGTTAAAATGTCGTCGAGGTCATTTCGTGCGAGCTCCGATCGAAAAGTTTA
CGTTGGCAATCTTGGAACGCACGCATCAAGAGAGGATCTTGAAGAAGAATTCAGCTACTA
CGGAAGATTGGACAGCGTTTGGGTCGCAAGAAACCCTCCAGGTTTTGCGTATGTTCTTTT
CGAAGATGCCCGAGATGCAAAAGATGCCGTTCGTGGATTAGATGGAAAAATAATTTGCGA
TCGAAAAGTAAGAGTTGACATTTCAAACTCCCGAAGTACCGGTCGGCCTGCACGACGTGG
TCCTGCTCCATATGATAGATATGGAGGAGGAGGTGGTGGTGGAAACCGAGGGTTTCGAAG
CGATATGAGATGTTACAACTGCAGCGAGACCGGTCACTTTGCACGTGATTGCCCAAGGTC
TAGAGGGTAAGCTTAAAATTGTTTTGTTTAATTGCGGTTACTTTATTATCTTGTTAGAAG
TATAGGTTTTAAGGTTTACTTTGATGATCCTTCAACCCAACAATCATTGATGTGAACATT
GCGCTCTCTTATGGCACAGCTGAGTATGGAAACCTCACCAAAATATAATATTATAATTTG
AAACAATTCATAAGCTATTAATTTAATTCCAAACTTTGCCGTGTCAAACTTTTAACTGAG
CATATCACTGCCCTTCTAGGCTGATTTTCATGTCACCGAGTGTACATTATTGATACGAGG
CCCATGTACGTGGTGCACAGTGGCTCAGAGCGCCTAATGAACGATAGAGGGCATGAACGA
TATGTGATCGTGGTGCAGTGTGCGTTTTTGTTCG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[9-119] 2.31E-28 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[11-91] 5.3E-23 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[17-90] 17.131 |
| SMART |
RRM_dom (IPR000504) - T[18-86] 4.3E-20 |
| Pfam |
RRM_dom (IPR000504) - T[19-84] 2.0E-15 |
| SUPERFAMILY |
Znf_CCHC_sf (IPR036875) - T[115-141] 6.28E-7 |
| ProSiteProfiles |
Znf_CCHC (IPR001878) - T[123-139] 11.07 |
| Pfam |
Znf_CCHC (IPR001878) - T[123-138] 2.7E-8 |
| SMART |
Znf_CCHC (IPR001878) - T[123-139] 4.4E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF3_HUMAN | 60.227 % | 104 | 1.58E-29 |
| SRSF7_HUMAN | 54.615 % | 127 | 2.69E-37 |