- Transcript 'KH2012:KH.C10.310.v1...' >
- Transcript 'KH2012:KH.C8.451.v1....' >
- Transcript 'KH2012:KH.C4.17.v1.A...' >
- Transcript 'KH2012:KH.C2.60.v1.A...' >
- Transcript 'KH2012:KH.C14.177.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.177.v2.B.nonSL4-1
Possible name(s)
RARS; RARS2; ZFP42
Gene model
Location
KhC14 [4,210,144 / 4,223,233]
Amino acid sequence
Length: 695
>KH.C14.177.v2.B.nonSL4-1
IICWKMTSNGSISKAEYERISLTIQKQEKEAAELKKELEALENGSYVLKEEEMSEKSLKL
MASNAKLAYQATHLQRALDAEVSQQRVPEFTQQTTNFNDGMVNINQRLTEIFLHSISASF
PGLKGKLPVSITLNQNEKFGDYQCNSAMPISGVLKAQGTKMAPRQIAELILKNLPSSDLI
DSCNIAGPGFINIRLNVSFLKRALSDVLVHGVRTHHSKGECGKVVIDYSSPNIAKEMHVG
HLRSTIIGDCIANLFEYFGHEVLRVNHVGDWGTQFGMLIAHLTDMFPNYKEESPPIGDLQ
AFYKQSKKRFDDDPEFKKRAYSCVVKLQSGDPDFINAWKLICDVSRKEFQVIYDRLGIVN
LIERGESFYHNLMPPVIAEIEKQGYVVVEDGRKLVFPEGSQFPLTIVKSDGGFTYDTSDL
ACIKQRIFDESGANLIYVTDAGQAAHFKAIYSVARKMGWYDPQVTRVEHVAFGVVLGEDR
KKFKTRSGETVRLAALLDEGRKRCEEKLKEKGRDKELTPEEFKAAQEAVAYGCIKYADLS
HNRINDYVFSFDKMLEDRGNTAAYLLYAYTRIKSIARVAKVSREELKEAASSFYDDDGLP
LEHAKELKLARFITRFPEVLQRVCDDLAPHTLCDYLYELATVYTEFYDVCYCVEKDRKTG
DVVKIHKHRLLLCDATVAVMDQCFKILGIKPVHKM
Nucleotide sequence
Length: 2,360
>KH2012:KH.C14.177.v2.B.nonSL4-1
ATAATCTGTTGGAAAATGACATCGAACGGTAGCATAAGTAAAGCAGAATACGAAAGAATC
TCACTGACAATACAAAAACAGGAGAAAGAAGCCGCGGAACTGAAGAAAGAACTGGAAGCA
TTAGAGAATGGAAGTTATGTTTTAAAGGAAGAAGAAATGAGCGAAAAAAGCTTGAAACTG
ATGGCTAGCAATGCAAAGTTGGCGTACCAGGCTACACACTTACAAAGGGCATTAGATGCT
GAAGTATCACAGCAACGAGTGCCAGAGTTCACCCAGCAAACCACAAACTTCAACGACGGG
ATGGTAAACATCAACCAAAGGTTGACAGAAATATTTCTTCACTCAATATCTGCAAGTTTC
CCTGGTTTGAAGGGGAAACTCCCTGTTTCGATAACTTTGAACCAAAATGAGAAGTTTGGA
GATTATCAATGTAACAGTGCAATGCCAATATCTGGGGTTCTAAAAGCCCAGGGAACGAAA
ATGGCTCCACGTCAAATTGCGGAATTAATTTTAAAGAACCTTCCCTCATCTGATCTAATA
GATAGTTGCAACATTGCGGGACCAGGATTTATAAATATTCGATTAAATGTTTCTTTCCTG
AAGAGGGCGCTGTCTGATGTTTTAGTCCATGGGGTGCGGACACATCATTCTAAAGGAGAA
TGTGGGAAGGTAGTGATCGATTATTCTTCACCAAACATCGCAAAAGAAATGCACGTCGGC
CATTTACGATCCACCATTATTGGTGATTGCATCGCTAATCTCTTTGAATACTTTGGTCAC
GAAGTACTTAGAGTTAACCATGTAGGGGATTGGGGAACCCAGTTTGGGATGCTGATCGCT
CATCTTACTGATATGTTTCCTAATTATAAAGAGGAGTCCCCGCCTATTGGTGATCTGCAG
GCTTTCTACAAACAATCAAAGAAAAGATTTGACGATGATCCCGAGTTTAAGAAACGAGCG
TATAGTTGCGTGGTGAAGCTACAAAGTGGTGACCCTGACTTTATTAATGCTTGGAAACTT
ATATGTGATGTTTCAAGGAAGGAGTTTCAAGTCATCTATGATAGACTGGGGATCGTTAAT
TTGATTGAGCGAGGAGAATCTTTTTACCATAACCTCATGCCTCCCGTTATTGCAGAGATA
GAGAAACAAGGCTATGTTGTGGTCGAAGACGGAAGGAAACTTGTTTTTCCGGAAGGTTCC
CAGTTTCCCCTCACGATAGTGAAGTCAGATGGTGGATTCACTTACGATACGAGTGACTTA
GCTTGTATAAAACAACGTATATTTGATGAAAGTGGAGCCAACCTCATCTATGTGACGGAT
GCAGGGCAAGCTGCTCACTTCAAAGCTATATATTCTGTGGCTAGAAAGATGGGTTGGTAT
GACCCACAAGTTACAAGGGTAGAACATGTTGCATTCGGGGTCGTACTGGGGGAAGATAGG
AAGAAATTTAAGACACGATCTGGTGAAACTGTAAGATTAGCGGCGTTGCTGGATGAAGGG
CGGAAGAGGTGTGAGGAGAAACTTAAAGAGAAAGGAAGAGATAAAGAACTTACTCCAGAG
GAGTTTAAAGCTGCTCAGGAAGCTGTAGCATATGGTTGCATCAAGTATGCAGATCTATCT
CATAACAGAATCAATGATTATGTTTTCTCCTTTGATAAAATGCTTGAAGATCGAGGCAAC
ACTGCAGCTTATCTACTTTATGCTTACACAAGGATAAAGTCCATAGCTCGTGTTGCAAAA
GTAAGTCGGGAAGAATTAAAAGAAGCTGCGTCATCTTTCTATGATGATGATGGCTTACCA
CTAGAGCACGCTAAAGAGCTAAAACTTGCTCGCTTCATAACTCGGTTCCCTGAAGTTTTA
CAACGAGTATGCGATGACCTCGCCCCGCACACGCTGTGTGATTACCTCTATGAGTTGGCT
ACCGTGTACACAGAGTTCTATGATGTTTGCTACTGTGTAGAGAAAGATAGAAAAACAGGT
GACGTCGTCAAGATACACAAACATCGACTTTTGCTTTGTGACGCAACAGTCGCCGTCATG
GATCAATGCTTTAAAATTTTAGGCATAAAACCCGTGCATAAAATGTAACCAAAGTTCCTG
TTGGACAAAATTAAATACAAGTTGCATTACATTTTTGGTAGCGGGCTTCGTCACCATAGG
TTTAATGACATCACACTTTCTTTTATGGCGTAATAGAGGATTTAAATACGGATTGGTAAT
GTGAATTTAATGGGAAACATTTACGCTCAAGTTTCAAATGTTAATTATTATCAATATGTC
AGACATTTATCCATTACTACGTGTTGTTGCGCGCAGATGCTCAATTTTTTGGTGCGGAAA
TAAATGAGAATATACATGTA
| SUPERFAMILY |
Arg-tRNA-synth_N_sf (IPR036695) - T[96-210] 1.96E-18 |
| Gene3D |
Arg-tRNA-synth_N_sf (IPR036695) - T[99-211] 9.2E-25 |
| PANTHER |
Arg-tRNA-ligase (IPR001278) - T[100-695] 1.5E-244 |
| SMART |
Arg-tRNA-synth_N (IPR005148) - T[106-195] 4.6E-25 |
| Hamap |
Arg-tRNA-ligase (IPR001278) - T[106-695] 23.464 |
| Pfam |
Arg-tRNA-synth_N (IPR005148) - T[108-195] 1.1E-18 |
| TIGRFAM |
Arg-tRNA-ligase (IPR001278) - T[130-695] 2.9E-135 |
| Pfam |
ArgRS_core (IPR035684) - T[204-551] 2.5E-141 |
| Gene3D |
Rossmann-like_a/b/a_fold (IPR014729) - T[221-563] 4.1E-110 |
| CDD |
ArgRS_core (IPR035684) - T[223-488] 2.38781E-75 |
| PRINTS |
Arg-tRNA-ligase (IPR001278) - T[223-238] 2.1E-27 - T[238-254] 2.1E-27 - T[262-275] 2.1E-27 - T[405-426] 2.1E-27 |
| ProSitePatterns |
aa-tRNA-synth_I_CS (IPR001412) - T[231-242] . |
| SUPERFAMILY |
tRNAsynth_Ia_anticodon-bd (IPR009080) - T[559-695] 3.92E-31 |
| Pfam |
DALR_anticod-bd (IPR008909) - T[565-695] 7.6E-31 |
| SMART |
DALR_anticod-bd (IPR008909) - T[565-695] 2.9E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SYRC_HUMAN | 58.37 % | 787 | 0 |
| SYRM_HUMAN | 29.931 % | 228 | 2.59E-66 |